FFCP PHASE1:Hg19::chr10:30869908..30869919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30869908..30869919,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30869908..30869919,+ | |description=CAGE_peak_at_chr10:30869908..30869919,+ | ||
|id=chr10:30869908..30869919,+ | |id=chr10:30869908..30869919,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.82e-78!42;CL:0000860!9.04e-73!45;CL:0002194!7.16e-50!63;CL:0000576!7.16e-50!63;CL:0000040!7.16e-50!63;CL:0000559!7.16e-50!63;CL:0002009!3.16e-48!65;CL:0000839!1.61e-44!70;CL:0000557!7.69e-44!71;CL:0000766!1.05e-40!76;CL:0002087!8.42e-35!119;CL:0002031!1.40e-30!124;CL:0000738!6.85e-29!140;CL:0000763!2.58e-26!112;CL:0000049!2.58e-26!112;CL:0000037!1.24e-22!172;CL:0000566!1.24e-22!172;CL:0002032!7.86e-22!165;CL:0000837!7.86e-22!165;CL:0000988!3.98e-21!182;CL:0000134!2.85e-08!358;CL:0002320!5.16e-08!365;CL:0000034!3.72e-07!444;CL:0000219!4.18e-07!390;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9;CL:0000048!9.38e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.82e-78!42;CL:0000860!9.04e-73!45;CL:0002194!7.16e-50!63;CL:0000576!7.16e-50!63;CL:0000040!7.16e-50!63;CL:0000559!7.16e-50!63;CL:0002009!3.16e-48!65;CL:0000839!1.61e-44!70;CL:0000557!7.69e-44!71;CL:0000766!1.05e-40!76;CL:0002087!8.42e-35!119;CL:0002031!1.40e-30!124;CL:0000738!6.85e-29!140;CL:0000763!2.58e-26!112;CL:0000049!2.58e-26!112;CL:0000037!1.24e-22!172;CL:0000566!1.24e-22!172;CL:0002032!7.86e-22!165;CL:0000837!7.86e-22!165;CL:0000988!3.98e-21!182;CL:0000134!2.85e-08!358;CL:0002320!5.16e-08!365;CL:0000034!3.72e-07!444;CL:0000219!4.18e-07!390;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9;CL:0000048!9.38e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-64;33!CL:0002057;5.06e-64;33!CL:0000473;9.44e-44;39!CL:0000234;9.44e-44;39!CL:0000576;3.26e-38;48!CL:0000766;2.04e-25;69!CL:0002087;1.28e-16;104!CL:0002393;4.87e-16;6!CL:0002397;4.87e-16;6!CL:0000763;1.25e-13;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.45e-78,42;CL:0002057,2.45e-78,42;CL:0000473,2.73e-68,48;CL:0000234,2.73e-68,48;CL:0002194,3.25e-54,59;CL:0000576,3.25e-54,59;CL:0000040,3.25e-54,59;CL:0000559,3.25e-54,59;CL:0002009,2.13e-52,61;CL:0000839,2.50e-48,66;CL:0000557,1.38e-47,67;CL:0000766,3.53e-44,72;CL:0000763,7.44e-29,108;CL:0000049,7.44e-29,108;CL:0002087,5.63e-27,115;CL:0002031,9.11e-26,120;CL:0000738,1.74e-22,136;CL:0002032,1.19e-18,161;CL:0000837,1.19e-18,161;CL:0000037,8.83e-18,168;CL:0000988,9.26e-17,177;CL:0002393,6.84e-11,9;CL:0002397,6.84e-11,9;CL:0000134,4.00e-07,354;CL:0002320,6.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-54;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.77e-38!80;UBERON:0001474!1.62e-35!86;UBERON:0002390!4.14e-32!102;UBERON:0003061!4.14e-32!102;UBERON:0002193!1.66e-31!112;UBERON:0004765!1.23e-29!101;UBERON:0001434!1.23e-29!101;UBERON:0002405!5.69e-28!115;UBERON:0002204!3.23e-16!167;UBERON:0003081!4.16e-14!216;UBERON:0002384!1.16e-07!375;UBERON:0000997!1.87e-07!1;UBERON:0005056!1.87e-07!1 | |ontology_enrichment_uberon=UBERON:0002371!1.77e-38!80;UBERON:0001474!1.62e-35!86;UBERON:0002390!4.14e-32!102;UBERON:0003061!4.14e-32!102;UBERON:0002193!1.66e-31!112;UBERON:0004765!1.23e-29!101;UBERON:0001434!1.23e-29!101;UBERON:0002405!5.69e-28!115;UBERON:0002204!3.23e-16!167;UBERON:0003081!4.16e-14!216;UBERON:0002384!1.16e-07!375;UBERON:0000997!1.87e-07!1;UBERON:0005056!1.87e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.02e-42,76;UBERON:0001474,1.36e-38,82;UBERON:0004765,5.25e-35,90;UBERON:0002405,8.09e-34,93;UBERON:0002390,5.36e-32,98;UBERON:0003061,5.36e-32,98;UBERON:0001434,2.55e-31,100;UBERON:0002193,7.44e-29,108;UBERON:0002204,6.70e-18,167;UBERON:0003081,2.59e-14,203;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315 | |||
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|short_description=p@chr10:30869908..30869919,+ | |short_description=p@chr10:30869908..30869919,+ | ||
}} | }} |
Latest revision as of 13:10, 23 July 2015
Short description: | p@chr10:30869908..30869919, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30869908..30869919, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.45e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-78 | 42 |
defensive cell | 2.73e-68 | 48 |
phagocyte | 2.73e-68 | 48 |
monopoietic cell | 3.25e-54 | 59 |
monocyte | 3.25e-54 | 59 |
monoblast | 3.25e-54 | 59 |
promonocyte | 3.25e-54 | 59 |
macrophage dendritic cell progenitor | 2.13e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.50e-48 | 66 |
granulocyte monocyte progenitor cell | 1.38e-47 | 67 |
myeloid leukocyte | 3.53e-44 | 72 |
myeloid cell | 7.44e-29 | 108 |
common myeloid progenitor | 7.44e-29 | 108 |
nongranular leukocyte | 5.63e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 9.11e-26 | 120 |
leukocyte | 1.74e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.19e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-18 | 161 |
hematopoietic stem cell | 8.83e-18 | 168 |
hematopoietic cell | 9.26e-17 | 177 |
intermediate monocyte | 6.84e-11 | 9 |
CD14-positive, CD16-positive monocyte | 6.84e-11 | 9 |
mesenchymal cell | 4.00e-07 | 354 |
connective tissue cell | 6.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.02e-42 | 76 |
bone element | 1.36e-38 | 82 |
skeletal element | 5.25e-35 | 90 |
immune system | 8.09e-34 | 93 |
hematopoietic system | 5.36e-32 | 98 |
blood island | 5.36e-32 | 98 |
skeletal system | 2.55e-31 | 100 |
hemolymphoid system | 7.44e-29 | 108 |
musculoskeletal system | 6.70e-18 | 167 |
lateral plate mesoderm | 2.59e-14 | 203 |
mesoderm | 2.47e-08 | 315 |
mesoderm-derived structure | 2.47e-08 | 315 |
presumptive mesoderm | 2.47e-08 | 315 |