FFCP PHASE1:Hg19::chr11:1861476..1861488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7136 | |EntrezGene=7136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11946 | |HGNC=11946 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000468473_5end | |association_with_transcript=28bp_to_ENST00000468473_5end | ||
|cluster_id=chr11:1861476..1861488,+ | |||
|coexpression_cluster_id=C3125 | |||
|description=CAGE_peak_7_at_TNNI2_5end | |description=CAGE_peak_7_at_TNNI2_5end | ||
|id=chr11:1861476..1861488,+ | |id=chr11:1861476..1861488,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.79e-52!76;CL:0002194!8.38e-48!63;CL:0000576!8.38e-48!63;CL:0000040!8.38e-48!63;CL:0000559!8.38e-48!63;CL:0002009!5.62e-46!65;CL:0002057!1.37e-45!42;CL:0000763!2.55e-43!112;CL:0000049!2.55e-43!112;CL:0000860!6.81e-42!45;CL:0000839!7.26e-42!70;CL:0000557!4.11e-41!71;CL:0000037!9.85e-34!172;CL:0000566!9.85e-34!172;CL:0000738!1.59e-33!140;CL:0000988!5.78e-31!182;CL:0002032!1.42e-28!165;CL:0000837!1.42e-28!165;CL:0002087!1.08e-26!119;CL:0002031!3.64e-21!124;CL:0002393!1.50e-11!9;CL:0002397!1.50e-11!9;CL:0000094!6.69e-10!8;CL:0000134!1.57e-08!358;CL:0000235!2.99e-08!10;CL:0002320!4.33e-08!365;CL:0000784!4.74e-08!3;CL:0000875!1.10e-07!3;CL:0002396!1.10e-07!3;CL:0000767!4.14e-07!3;CL:0000081!5.72e-07!11 | |ontology_enrichment_celltype=CL:0000766!4.79e-52!76;CL:0002194!8.38e-48!63;CL:0000576!8.38e-48!63;CL:0000040!8.38e-48!63;CL:0000559!8.38e-48!63;CL:0002009!5.62e-46!65;CL:0002057!1.37e-45!42;CL:0000763!2.55e-43!112;CL:0000049!2.55e-43!112;CL:0000860!6.81e-42!45;CL:0000839!7.26e-42!70;CL:0000557!4.11e-41!71;CL:0000037!9.85e-34!172;CL:0000566!9.85e-34!172;CL:0000738!1.59e-33!140;CL:0000988!5.78e-31!182;CL:0002032!1.42e-28!165;CL:0000837!1.42e-28!165;CL:0002087!1.08e-26!119;CL:0002031!3.64e-21!124;CL:0002393!1.50e-11!9;CL:0002397!1.50e-11!9;CL:0000094!6.69e-10!8;CL:0000134!1.57e-08!358;CL:0000235!2.99e-08!10;CL:0002320!4.33e-08!365;CL:0000784!4.74e-08!3;CL:0000875!1.10e-07!3;CL:0002396!1.10e-07!3;CL:0000767!4.14e-07!3;CL:0000081!5.72e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.82e-14;6!CL:0000784;4.69e-13;3!CL:0000473;2.28e-07;39!CL:0000234;2.28e-07;39!CL:0000766;6.08e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.82e-14,6;CL:0000784,6.17e-13,3;CL:0000473,4.26e-11,48;CL:0000234,4.26e-11,48;CL:0000766,6.49e-11,72;CL:0000738,4.82e-09,136;CL:0002194,1.12e-08,59;CL:0000576,1.12e-08,59;CL:0000040,1.12e-08,59;CL:0000559,1.12e-08,59;CL:0002009,2.30e-08,61;CL:0000763,2.51e-08,108;CL:0000049,2.51e-08,108;CL:0000037,3.47e-08,168;CL:0000839,1.15e-07,66;CL:0000988,1.19e-07,177;CL:0000557,1.54e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.46e-37!80;UBERON:0001474!6.72e-34!86;UBERON:0002390!2.35e-31!102;UBERON:0003061!2.35e-31!102;UBERON:0002193!6.55e-29!112;UBERON:0004765!4.19e-27!101;UBERON:0001434!4.19e-27!101;UBERON:0002405!2.79e-26!115;UBERON:0002204!1.49e-17!167;UBERON:0003081!2.77e-11!216;UBERON:0002384!5.51e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!2.46e-37!80;UBERON:0001474!6.72e-34!86;UBERON:0002390!2.35e-31!102;UBERON:0003061!2.35e-31!102;UBERON:0002193!6.55e-29!112;UBERON:0004765!4.19e-27!101;UBERON:0001434!4.19e-27!101;UBERON:0002405!2.79e-26!115;UBERON:0002204!1.49e-17!167;UBERON:0003081!2.77e-11!216;UBERON:0002384!5.51e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.25e-13;3!UBERON:0001033;1.25e-13;3!UBERON:0002426;8.94e-11;1!UBERON:0003831;8.94e-11;1!UBERON:0003898;8.94e-11;1!UBERON:0004830;8.94e-11;1!UBERON:0003830;8.94e-11;1!UBERON:0005175;8.94e-11;1!UBERON:0001774;8.94e-11;1!UBERON:0001103;8.94e-11;1!UBERON:0002171;2.87e-10;1!UBERON:0006518;2.87e-10;1!UBERON:0008949;2.87e-10;1!UBERON:0000101;2.87e-10;1!UBERON:0002167;2.87e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.25e-13,3;UBERON:0001033,1.25e-13,3;UBERON:0010056,1.25e-13,3;UBERON:0002426,8.95e-11,1;UBERON:0003831,8.95e-11,1;UBERON:0003898,8.95e-11,1;UBERON:0004830,8.95e-11,1;UBERON:0003830,8.95e-11,1;UBERON:0005175,8.95e-11,1;UBERON:0001774,8.95e-11,1;UBERON:0001103,8.95e-11,1;UBERON:0010084,8.95e-11,1;UBERON:0002171,3.29e-10,1;UBERON:0006518,3.29e-10,1;UBERON:0008949,3.29e-10,1;UBERON:0000101,3.29e-10,1;UBERON:0002167,3.29e-10,1 | |||
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| ||
|short_description=p7@TNNI2 | |short_description=p7@TNNI2 | ||
}} | }} |
Latest revision as of 03:14, 17 September 2015
Short description: | p7@TNNI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNNI2_5end |
Coexpression cluster: | C3125_tongue_hairy_Eosinophils_diaphragm_penis_Neutrophils_skeletal |
Association with transcript: | 28bp_to_ENST00000468473_5end |
EntrezGene: | TNNI2 |
HGNC: | 11946 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.82e-14 | 6 |
plasmacytoid dendritic cell | 6.17e-13 | 3 |
defensive cell | 4.26e-11 | 48 |
phagocyte | 4.26e-11 | 48 |
myeloid leukocyte | 6.49e-11 | 72 |
leukocyte | 4.82e-09 | 136 |
monopoietic cell | 1.12e-08 | 59 |
monocyte | 1.12e-08 | 59 |
monoblast | 1.12e-08 | 59 |
promonocyte | 1.12e-08 | 59 |
macrophage dendritic cell progenitor | 2.30e-08 | 61 |
myeloid cell | 2.51e-08 | 108 |
common myeloid progenitor | 2.51e-08 | 108 |
hematopoietic stem cell | 3.47e-08 | 168 |
myeloid lineage restricted progenitor cell | 1.15e-07 | 66 |
hematopoietic cell | 1.19e-07 | 177 |
granulocyte monocyte progenitor cell | 1.54e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.25e-13 | 3 |
gustatory system | 1.25e-13 | 3 |
future tongue | 1.25e-13 | 3 |
chest muscle | 8.95e-11 | 1 |
respiratory system muscle | 8.95e-11 | 1 |
skeletal muscle of trunk | 8.95e-11 | 1 |
respiratory system skeletal muscle | 8.95e-11 | 1 |
thoracic segment muscle | 8.95e-11 | 1 |
chest organ | 8.95e-11 | 1 |
muscle of trunk | 8.95e-11 | 1 |
diaphragm | 8.95e-11 | 1 |
future diaphragm | 8.95e-11 | 1 |
lower lobe of right lung | 3.29e-10 | 1 |
right lung lobe | 3.29e-10 | 1 |
lower lobe of lung | 3.29e-10 | 1 |
lobe of lung | 3.29e-10 | 1 |
right lung | 3.29e-10 | 1 |