FFCP PHASE1:Hg19::chr11:70963843..70963872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFP8 | |UniProt=C9JFP8 | ||
|association_with_transcript=-220bp_to_ENST00000413503_5end | |association_with_transcript=-220bp_to_ENST00000413503_5end | ||
|cluster_id=chr11:70963843..70963872,- | |||
|coexpression_cluster_id=C3198 | |||
|description=CAGE_peak_6_at_SHANK2_5end | |description=CAGE_peak_6_at_SHANK2_5end | ||
|id=chr11:70963843..70963872,- | |id=chr11:70963843..70963872,- | ||
|ontology_enrichment_celltype=CL:0000223!5.05e-12!59;CL:0002076!5.75e-10!43;CL:0000066!6.24e-10!254 | |ontology_enrichment_celltype=CL:0000223!5.05e-12!59;CL:0002076!5.75e-10!43;CL:0000066!6.24e-10!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,6.36e-09,58;CL:0000066,5.90e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.48e-11;30!UBERON:0003104;2.30e-07;31!UBERON:0009497;2.42e-07;13 | |||
|ontology_enrichment_disease=DOID:299!1.65e-08!25;DOID:305!3.61e-08!106 | |ontology_enrichment_disease=DOID:299!1.65e-08!25;DOID:305!3.61e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;9.50e-12;4!DOID:1612;9.50e-12;4!DOID:7;9.46e-08;39!DOID:299;1.23e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.80e-12,4;DOID:1612,3.80e-12,4;DOID:305,2.33e-10,106;DOID:7,1.69e-09,39;DOID:0050687,1.86e-08,143;DOID:299,1.19e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.42e-23!169;UBERON:0000925!2.42e-23!169;UBERON:0006595!2.42e-23!169;UBERON:0001007!2.50e-20!155;UBERON:0001555!2.50e-20!155;UBERON:0007026!2.50e-20!155;UBERON:0004921!2.72e-15!129;UBERON:0004185!2.72e-15!129;UBERON:0005911!6.23e-14!82;UBERON:0000077!2.53e-13!130;UBERON:0000466!6.38e-13!126;UBERON:0003929!2.63e-12!54;UBERON:0000481!2.79e-12!347;UBERON:0005177!2.53e-11!107;UBERON:0009569!3.14e-11!113;UBERON:0003104!1.30e-10!238;UBERON:0009142!1.30e-10!238;UBERON:0002100!1.35e-10!216;UBERON:0000475!2.62e-09!365;UBERON:0005172!2.95e-09!55;UBERON:0005173!2.95e-09!55;UBERON:0009497!3.78e-09!25;UBERON:0000015!3.78e-09!25;UBERON:0002423!3.78e-09!25;UBERON:0006235!3.78e-09!25;UBERON:0004161!3.78e-09!25;UBERON:0009854!2.44e-08!23;UBERON:0005409!6.96e-08!35;UBERON:0001041!8.17e-08!98;UBERON:0008835!9.09e-08!22;UBERON:0003894!9.09e-08!22;UBERON:0002417!1.02e-07!61;UBERON:0000916!1.02e-07!61;UBERON:0006554!1.03e-07!44;UBERON:0009856!1.09e-07!26;UBERON:0000464!1.11e-07!104;UBERON:0000160!2.05e-07!27;UBERON:0002530!2.11e-07!59;UBERON:0001008!2.41e-07!45;UBERON:0000161!2.78e-07!35;UBERON:0007499!3.79e-07!25;UBERON:0000468!5.05e-07!659;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31 | |ontology_enrichment_uberon=UBERON:0004119!2.42e-23!169;UBERON:0000925!2.42e-23!169;UBERON:0006595!2.42e-23!169;UBERON:0001007!2.50e-20!155;UBERON:0001555!2.50e-20!155;UBERON:0007026!2.50e-20!155;UBERON:0004921!2.72e-15!129;UBERON:0004185!2.72e-15!129;UBERON:0005911!6.23e-14!82;UBERON:0000077!2.53e-13!130;UBERON:0000466!6.38e-13!126;UBERON:0003929!2.63e-12!54;UBERON:0000481!2.79e-12!347;UBERON:0005177!2.53e-11!107;UBERON:0009569!3.14e-11!113;UBERON:0003104!1.30e-10!238;UBERON:0009142!1.30e-10!238;UBERON:0002100!1.35e-10!216;UBERON:0000475!2.62e-09!365;UBERON:0005172!2.95e-09!55;UBERON:0005173!2.95e-09!55;UBERON:0009497!3.78e-09!25;UBERON:0000015!3.78e-09!25;UBERON:0002423!3.78e-09!25;UBERON:0006235!3.78e-09!25;UBERON:0004161!3.78e-09!25;UBERON:0009854!2.44e-08!23;UBERON:0005409!6.96e-08!35;UBERON:0001041!8.17e-08!98;UBERON:0008835!9.09e-08!22;UBERON:0003894!9.09e-08!22;UBERON:0002417!1.02e-07!61;UBERON:0000916!1.02e-07!61;UBERON:0006554!1.03e-07!44;UBERON:0009856!1.09e-07!26;UBERON:0000464!1.11e-07!104;UBERON:0000160!2.05e-07!27;UBERON:0002530!2.11e-07!59;UBERON:0001008!2.41e-07!45;UBERON:0000161!2.78e-07!35;UBERON:0007499!3.79e-07!25;UBERON:0000468!5.05e-07!659;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.64e-10;31!UBERON:0002330;1.64e-10;31!UBERON:0002423;1.10e-09;25!UBERON:0002107;2.29e-08;19!UBERON:0006925;2.29e-08;19!UBERON:0005172;6.06e-07;52!UBERON:0005173;6.06e-07;52!UBERON:0001829;6.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,4.94e-14,82;UBERON:0003929,6.51e-13,54;UBERON:0004119,7.72e-13,160;UBERON:0000925,7.72e-13,160;UBERON:0006595,7.72e-13,160;UBERON:0004921,1.11e-12,118;UBERON:0001007,9.19e-12,145;UBERON:0001555,9.19e-12,145;UBERON:0007026,9.19e-12,145;UBERON:0009569,2.26e-11,112;UBERON:0008835,2.59e-11,22;UBERON:0003894,2.59e-11,22;UBERON:0002530,2.65e-11,59;UBERON:0002365,5.78e-11,31;UBERON:0002330,5.78e-11,31;UBERON:0009854,9.93e-11,23;UBERON:0005177,7.22e-10,101;UBERON:0007499,1.05e-09,25;UBERON:0009497,1.05e-09,25;UBERON:0000015,1.05e-09,25;UBERON:0002423,1.05e-09,25;UBERON:0006235,1.05e-09,25;UBERON:0004161,1.05e-09,25;UBERON:0005172,1.68e-09,54;UBERON:0005173,1.68e-09,54;UBERON:0009856,2.99e-09,26;UBERON:0001041,3.18e-09,87;UBERON:0002100,1.82e-08,199;UBERON:0002107,2.04e-08,19;UBERON:0006925,2.04e-08,19;UBERON:0008836,2.04e-08,19;UBERON:0002417,3.49e-08,60;UBERON:0000916,3.49e-08,60;UBERON:0006554,3.34e-07,47;UBERON:0005153,4.26e-07,37;UBERON:0001008,5.38e-07,48 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0.218441372130172,0.527533956456907,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0,1.24430121722827,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0.490385709340376,0,0,0.468642863667593,0.312160076830321,0,0.597794722207204,0,0,0,0.61246251376468,0.61417158655884,0.826606249406124,0,0,0,0,0,0.250237039743928,0.554128230968366,0.877955241761676,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0.772921620136887,0.37223371266318,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0.731842236777572,1.19276791489337,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,2.94848165003288,2.95394953340702,0,4.5505722260952,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,1.24900292158013,0.788512075169673,2.45996971484698,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,4.3509401852984,1.00253235151642,0.460404944679482,0.459257792658427,0.182091168006717,0,0.451199612907412,1.00119938235739,0.784349769176855,0,0.527758144464379,0,0,0,1.54227252690289,1.08378575017541,0,0.509752546090077,0,0.671624264166535,0,0,0,0.328014645699706,0.650756789328606,2.98818933778395,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0.495854746082934,1.72971060628596,2.67986696238627,0.6069466851333,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0.511795582622668,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0.379473173765715,0.349934720244983,0.673554789078584,0.670302275535787,0,3.95403963262472,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,2.3874448473769,0.593929361665277,0.614321404198464,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0.246169610922139,1.24415835064723,2.24670877868317,0.895105873378046,0,0.197286811273867,0,2.22273980289274,0,0,0,1.5625665665114,8.1337799996462,0,0.796554137998498,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0,0.46112780877612,1.43612231055635,0.651884231532048,0.31900115973192,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,1.05499032264014,1.30586246527318,3.53382678584852,0,0,0.707660516026713,1.22206028986725,0,0,0,0.134802265961354,0,0.234264445725339,0,1.56531695145672,0,2.76209081994573,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,1.19472429772959,0.569219092059585,0,0.347119476670262,0.0979923974143777,0,0.34945333648406,0.51595809741485,0,0,0,0,0,0,0,0,0,0.586654148204409,0.721429382263803,0.426905989478705,0,2.01726584015748,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0,1.80149941771202,0,0.787831823072237,1.07140615895516,0.808842526250219,3.93709926058995,0,0,0.136203406111576,0.482259445395058,0.825236619583403,1.66176135211674,0,0,0.0607495566580247,0.335434687599266,1.18208560948797,3.30463905250488,2.32320740342694,1.79287339332845,0.959575986597226,0,0,0,0,0,0,0,0,0,0,1.31897010310274,1.32506888912221,0,0.13223260174269,2.22412889249628,1.40963004463334,1.81538601365081,0.943225830597996,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0.499921631848426,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.378806010550178,0.50313580350515,0,0.228840068396924,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.537052785212442,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0.530067437837643,0,0,0.76872455576384,0,0,0,0,0,0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| ||
|short_description=p6@SHANK2 | |short_description=p6@SHANK2 | ||
}} | }} |
Latest revision as of 23:36, 19 September 2015
Short description: | p6@SHANK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SHANK2_5end |
Coexpression cluster: | C3198_salivary_breast_submaxillary_Intestinal_Hepatocyte_Prostate_thyroid |
Association with transcript: | -220bp_to_ENST00000413503_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | C9JFP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data