FFCP PHASE1:Hg19::chr9:116327708..116327758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-216bp_to_uc011lxh.1_5end | |association_with_transcript=-216bp_to_uc011lxh.1_5end | ||
|cluster_id=chr9:116327708..116327758,+ | |||
|description=CAGE_peak_7_at_RGS3_5end | |description=CAGE_peak_7_at_RGS3_5end | ||
|id=chr9:116327708..116327758,+ | |id=chr9:116327708..116327758,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.09e-26!180;CL:0000057!1.11e-18!75;CL:0000183!8.49e-10!59;CL:0000187!5.75e-09!54;CL:0000680!1.13e-08!57;CL:0000056!1.13e-08!57;CL:0000355!1.13e-08!57;CL:0000220!3.11e-08!246;CL:0002321!5.71e-08!248;CL:0002620!3.11e-07!23;CL:0000192!4.03e-07!42;CL:0000514!4.03e-07!42;CL:0000548!5.00e-07!679;CL:0000004!5.00e-07!679;CL:0000255!5.00e-07!679;CL:0000393!5.93e-07!60;CL:0000211!5.93e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.09e-26!180;CL:0000057!1.11e-18!75;CL:0000183!8.49e-10!59;CL:0000187!5.75e-09!54;CL:0000680!1.13e-08!57;CL:0000056!1.13e-08!57;CL:0000355!1.13e-08!57;CL:0000220!3.11e-08!246;CL:0002321!5.71e-08!248;CL:0002620!3.11e-07!23;CL:0000192!4.03e-07!42;CL:0000514!4.03e-07!42;CL:0000548!5.00e-07!679;CL:0000004!5.00e-07!679;CL:0000255!5.00e-07!679;CL:0000393!5.93e-07!60;CL:0000211!5.93e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000057;4.22e-10;73!CL:0002620;2.11e-07;23!CL:0002320;3.53e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.39e-20,76;CL:0000187,6.39e-08,55;CL:0002620,2.17e-07,23;CL:0002321,2.35e-07,250;CL:0000680,5.72e-07,58;CL:0000056,5.72e-07,58;CL:0000355,5.72e-07,58;CL:0000192,6.96e-07,43;CL:0000514,6.96e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.20e-16!95;UBERON:0000475!1.23e-12!365;UBERON:0000914!2.04e-11!83;UBERON:0002329!2.04e-11!83;UBERON:0003077!2.04e-11!83;UBERON:0003059!2.04e-11!83;UBERON:0007282!2.04e-11!83;UBERON:0009618!2.04e-11!83;UBERON:0007285!2.04e-11!83;UBERON:0000486!7.93e-11!82;UBERON:0000481!3.69e-10!347;UBERON:0005256!3.52e-09!143;UBERON:0002100!1.07e-08!216;UBERON:0000468!1.59e-08!659;UBERON:0004290!2.23e-08!70;UBERON:0001444!2.31e-08!48;UBERON:0002097!5.64e-08!40;UBERON:0002199!6.62e-08!45;UBERON:0002416!6.62e-08!45;UBERON:0003104!9.28e-08!238;UBERON:0009142!9.28e-08!238;UBERON:0000467!5.52e-07!625;UBERON:0001134!5.94e-07!61;UBERON:0002036!5.94e-07!61;UBERON:0003082!5.94e-07!61;UBERON:0000480!7.95e-07!626;UBERON:0002385!8.87e-07!63;UBERON:0001015!8.87e-07!63;UBERON:0000383!8.87e-07!63 | |ontology_enrichment_uberon=UBERON:0003102!2.20e-16!95;UBERON:0000475!1.23e-12!365;UBERON:0000914!2.04e-11!83;UBERON:0002329!2.04e-11!83;UBERON:0003077!2.04e-11!83;UBERON:0003059!2.04e-11!83;UBERON:0007282!2.04e-11!83;UBERON:0009618!2.04e-11!83;UBERON:0007285!2.04e-11!83;UBERON:0000486!7.93e-11!82;UBERON:0000481!3.69e-10!347;UBERON:0005256!3.52e-09!143;UBERON:0002100!1.07e-08!216;UBERON:0000468!1.59e-08!659;UBERON:0004290!2.23e-08!70;UBERON:0001444!2.31e-08!48;UBERON:0002097!5.64e-08!40;UBERON:0002199!6.62e-08!45;UBERON:0002416!6.62e-08!45;UBERON:0003104!9.28e-08!238;UBERON:0009142!9.28e-08!238;UBERON:0000467!5.52e-07!625;UBERON:0001134!5.94e-07!61;UBERON:0002036!5.94e-07!61;UBERON:0003082!5.94e-07!61;UBERON:0000480!7.95e-07!626;UBERON:0002385!8.87e-07!63;UBERON:0001015!8.87e-07!63;UBERON:0000383!8.87e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0003102;6.01e-08;50!UBERON:0002384;1.79e-07;198!UBERON:0002097;2.18e-07;41!UBERON:0002199;6.14e-07;46!UBERON:0002416;6.14e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.15e-18,99;UBERON:0000486,4.05e-09,83;UBERON:0002097,4.20e-09,41;UBERON:0002199,8.21e-09,46;UBERON:0002416,8.21e-09,46;UBERON:0004923,1.88e-08,66;UBERON:0000033,1.81e-07,56;UBERON:0001444,4.08e-07,49;UBERON:0007524,4.71e-07,73;UBERON:0000075,6.20e-07,16;UBERON:0002329,7.60e-07,71;UBERON:0003059,7.60e-07,71;UBERON:0007282,7.60e-07,71;UBERON:0004290,7.60e-07,71;UBERON:0009618,7.60e-07,71;UBERON:0007503,8.15e-07,78 | |||
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| ||
|short_description=p7@RGS3 | |short_description=p7@RGS3 | ||
}} | }} |
Latest revision as of 07:22, 20 September 2015
Short description: | p7@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -216bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.39e-20 | 76 |
muscle cell | 6.39e-08 | 55 |
skin fibroblast | 2.17e-07 | 23 |
embryonic cell | 2.35e-07 | 250 |
muscle precursor cell | 5.72e-07 | 58 |
myoblast | 5.72e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.72e-07 | 58 |
smooth muscle cell | 6.96e-07 | 43 |
smooth muscle myoblast | 6.96e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.15e-18 | 99 |
multilaminar epithelium | 4.05e-09 | 83 |
skin of body | 4.20e-09 | 41 |
integument | 8.21e-09 | 46 |
integumental system | 8.21e-09 | 46 |
organ component layer | 1.88e-08 | 66 |
head | 1.81e-07 | 56 |
subdivision of head | 4.08e-07 | 49 |
dense mesenchyme tissue | 4.71e-07 | 73 |
subdivision of skeletal system | 6.20e-07 | 16 |
somite | 7.60e-07 | 71 |
presomitic mesoderm | 7.60e-07 | 71 |
presumptive segmental plate | 7.60e-07 | 71 |
dermomyotome | 7.60e-07 | 71 |
trunk paraxial mesoderm | 7.60e-07 | 71 |
epithelial vesicle | 8.15e-07 | 78 |