FFCP PHASE1:Hg19::chr14:104698008..104698020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:104698008..104698020,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr14:104698008..104698020,+ | |description=CAGE_peak_at_chr14:104698008..104698020,+ | ||
|id=chr14:104698008..104698020,+ | |id=chr14:104698008..104698020,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.81e-23;5!CL:0002321;1.65e-08;15!CL:0000243;1.29e-07;15!CL:0000125;1.29e-07;15!CL:0000095;6.57e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59;CL:0000243,1.38e-07,15;CL:0000125,1.38e-07,15;CL:0000030,1.38e-07,15;CL:0000339,1.38e-07,15;CL:0000095,6.97e-07,17;CL:0000123,6.97e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.98e-11;10!UBERON:0003056;9.90e-11;3!CL:0000339;1.29e-07;15 | |||
|ontology_enrichment_disease=DOID:3095!5.81e-11!22;DOID:2994!5.81e-11!22;DOID:171!2.94e-10!10;DOID:169!2.22e-08!6 | |ontology_enrichment_disease=DOID:3095!5.81e-11!22;DOID:2994!5.81e-11!22;DOID:171!2.94e-10!10;DOID:169!2.22e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:169;9.49e-20;6!DOID:171;2.81e-12;10!DOID:3093;2.13e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.13e-20,6;DOID:171,2.37e-12,10;DOID:3093,2.34e-10,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000013;1.81e-23;5!UBERON:0002410;1.81e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000010;1.58e-13;8!UBERON:0000966;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000013,1.28e-23,5;UBERON:0002410,1.28e-23,5;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000010,1.31e-13,8;UBERON:0001016,2.47e-11,89;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68 | |||
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| ||
|short_description=p@chr14:104698008..104698020,+ | |short_description=p@chr14:104698008..104698020,+ | ||
}} | }} |
Latest revision as of 18:24, 24 July 2015
Short description: | p@chr14:104698008..104698020, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104698008..104698020, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.30e-11 | 41 |
neurectodermal cell | 6.88e-08 | 59 |
glial cell (sensu Vertebrata) | 1.38e-07 | 15 |
glial cell | 1.38e-07 | 15 |
glioblast | 1.38e-07 | 15 |
glioblast (sensu Vertebrata) | 1.38e-07 | 15 |
neuron associated cell | 6.97e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.97e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
sympathetic nervous system | 1.28e-23 | 5 |
autonomic nervous system | 1.28e-23 | 5 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
peripheral nervous system | 1.31e-13 | 8 |
nervous system | 2.47e-11 | 89 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.13e-20 | 6 |
neuroectodermal tumor | 2.37e-12 | 10 |
nervous system cancer | 2.34e-10 | 11 |