FFCP PHASE1:Hg19::chr17:1985423..1985434,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1985423..1985434,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr17:1985423..1985434,- | |description=CAGE_peak_at_chr17:1985423..1985434,- | ||
|id=chr17:1985423..1985434,- | |id=chr17:1985423..1985434,- | ||
|ontology_enrichment_celltype=CL:0000080!1.36e-11!6;CL:0002582!2.84e-10!3;CL:0000183!4.79e-10!59;CL:0000187!5.56e-09!54;CL:0000680!1.95e-08!57;CL:0000056!1.95e-08!57;CL:0000355!1.95e-08!57;CL:0002601!2.02e-08!1;CL:0002379!3.57e-08!1;CL:0000393!6.05e-08!60;CL:0000211!6.05e-08!60;CL:0000192!2.51e-07!42;CL:0000514!2.51e-07!42 | |ontology_enrichment_celltype=CL:0000080!1.36e-11!6;CL:0002582!2.84e-10!3;CL:0000183!4.79e-10!59;CL:0000187!5.56e-09!54;CL:0000680!1.95e-08!57;CL:0000056!1.95e-08!57;CL:0000355!1.95e-08!57;CL:0002601!2.02e-08!1;CL:0002379!3.57e-08!1;CL:0000393!6.05e-08!60;CL:0000211!6.05e-08!60;CL:0000192!2.51e-07!42;CL:0000514!2.51e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.22e-08!1;DOID:0060061!1.22e-08!1;DOID:8691!1.22e-08!1;DOID:3620!3.57e-08!1;DOID:3565!3.57e-08!1 | |ontology_enrichment_disease=DOID:0060060!1.22e-08!1;DOID:0060061!1.22e-08!1;DOID:8691!1.22e-08!1;DOID:3620!3.57e-08!1;DOID:3565!3.57e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;6.58e-50;1!DOID:0060061;6.58e-50;1!DOID:8691;6.58e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.58e-50,1;DOID:0060061,6.58e-50,1;DOID:8691,6.58e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0001154!2.33e-08!1;UBERON:0001153!2.33e-08!1;UBERON:0001134!8.60e-08!61;UBERON:0002036!8.60e-08!61;UBERON:0003082!8.60e-08!61;UBERON:0002385!1.68e-07!63;UBERON:0001015!1.68e-07!63;UBERON:0000383!1.68e-07!63;UBERON:0000478!2.69e-07!24;UBERON:0002331!3.94e-07!10;UBERON:0000358!3.94e-07!10;UBERON:0000307!3.94e-07!10;UBERON:0000091!3.94e-07!10;UBERON:0000087!3.94e-07!10;UBERON:0007806!3.94e-07!10;UBERON:0008780!3.94e-07!10;UBERON:0005728!3.94e-07!10 | |ontology_enrichment_uberon=UBERON:0001154!2.33e-08!1;UBERON:0001153!2.33e-08!1;UBERON:0001134!8.60e-08!61;UBERON:0002036!8.60e-08!61;UBERON:0003082!8.60e-08!61;UBERON:0002385!1.68e-07!63;UBERON:0001015!1.68e-07!63;UBERON:0000383!1.68e-07!63;UBERON:0000478!2.69e-07!24;UBERON:0002331!3.94e-07!10;UBERON:0000358!3.94e-07!10;UBERON:0000307!3.94e-07!10;UBERON:0000091!3.94e-07!10;UBERON:0000087!3.94e-07!10;UBERON:0007806!3.94e-07!10;UBERON:0008780!3.94e-07!10;UBERON:0005728!3.94e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.18e-45;10!UBERON:0000178;1.81e-30;15!UBERON:0000179;1.81e-30;15!UBERON:0000463;1.81e-30;15!UBERON:0000478;1.88e-19;24!UBERON:0002390;5.90e-15;32!UBERON:0000922;9.47e-10;49!UBERON:0002193;7.35e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.18e-45,10;UBERON:0000358,4.18e-45,10;UBERON:0000307,4.18e-45,10;UBERON:0000091,4.18e-45,10;UBERON:0000087,4.18e-45,10;UBERON:0007010,4.18e-45,10;UBERON:0007806,4.18e-45,10;UBERON:0008780,4.18e-45,10;UBERON:0005728,4.18e-45,10;UBERON:0000178,1.81e-30,15;UBERON:0000179,1.81e-30,15;UBERON:0000463,1.81e-30,15;UBERON:0000478,1.88e-19,24 | |||
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|short_description=p@chr17:1985423..1985434,- | |short_description=p@chr17:1985423..1985434,- | ||
}} | }} |
Latest revision as of 14:35, 25 July 2015
Short description: | p@chr17:1985423..1985434, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1985423..1985434, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.18e-45 | 10 |
blastocyst | 4.18e-45 | 10 |
blastula | 4.18e-45 | 10 |
bilaminar disc | 4.18e-45 | 10 |
inner cell mass | 4.18e-45 | 10 |
cleaving embryo | 4.18e-45 | 10 |
connecting stalk | 4.18e-45 | 10 |
inner cell mass derived epiblast | 4.18e-45 | 10 |
extraembryonic mesoderm | 4.18e-45 | 10 |
blood | 1.81e-30 | 15 |
haemolymphatic fluid | 1.81e-30 | 15 |
organism substance | 1.81e-30 | 15 |
extraembryonic structure | 1.88e-19 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.58e-50 | 1 |
cutaneous T cell lymphoma | 6.58e-50 | 1 |
mycosis fungoides | 6.58e-50 | 1 |