FFCP PHASE1:Hg19::chr19:14546214..14546245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:14546214..14546245,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr19:14546214..14546245,+ | |description=CAGE_peak_at_chr19:14546214..14546245,+ | ||
|id=chr19:14546214..14546245,+ | |id=chr19:14546214..14546245,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.36e-18!24;CL:0000860!8.97e-17!45;CL:0002057!9.68e-17!42;CL:0002078!4.23e-15!44;CL:0000071!1.77e-13!18;CL:0002546!1.77e-13!18;CL:0000115!1.03e-12!35;CL:1000413!3.50e-12!9;CL:0000213!1.14e-11!57;CL:0000215!1.14e-11!57;CL:0000766!1.22e-11!76;CL:0002194!4.70e-10!63;CL:0000576!4.70e-10!63;CL:0000040!4.70e-10!63;CL:0000559!4.70e-10!63;CL:0002393!1.01e-09!9;CL:0002397!1.01e-09!9;CL:0002009!1.40e-09!65;CL:0000839!1.60e-08!70;CL:0000875!1.86e-08!3;CL:0002396!1.86e-08!3;CL:0000557!2.49e-08!71;CL:0000767!1.58e-07!3;CL:0000842!2.05e-07!3;CL:0000763!3.71e-07!112;CL:0000049!3.71e-07!112;CL:0002541!5.95e-07!3 | |ontology_enrichment_celltype=CL:0002139!6.36e-18!24;CL:0000860!8.97e-17!45;CL:0002057!9.68e-17!42;CL:0002078!4.23e-15!44;CL:0000071!1.77e-13!18;CL:0002546!1.77e-13!18;CL:0000115!1.03e-12!35;CL:1000413!3.50e-12!9;CL:0000213!1.14e-11!57;CL:0000215!1.14e-11!57;CL:0000766!1.22e-11!76;CL:0002194!4.70e-10!63;CL:0000576!4.70e-10!63;CL:0000040!4.70e-10!63;CL:0000559!4.70e-10!63;CL:0002393!1.01e-09!9;CL:0002397!1.01e-09!9;CL:0002009!1.40e-09!65;CL:0000839!1.60e-08!70;CL:0000875!1.86e-08!3;CL:0002396!1.86e-08!3;CL:0000557!2.49e-08!71;CL:0000767!1.58e-07!3;CL:0000842!2.05e-07!3;CL:0000763!3.71e-07!112;CL:0000049!3.71e-07!112;CL:0002541!5.95e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000875;2.40e-55;3!CL:0002396;2.40e-55;3!CL:0002393;1.34e-27;6!CL:0002397;1.34e-27;6!CL:0000576;1.28e-14;48!CL:0000766;1.36e-14;69!CL:0002545;2.99e-10;2!CL:1000413;6.88e-09;9!CL:0000775;2.32e-07;3!CL:0000763;8.45e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.53e-72,9;CL:0002397,4.53e-72,9;CL:0000875,2.40e-55,3;CL:0002396,2.40e-55,3;CL:0000860,5.16e-27,42;CL:0002057,5.16e-27,42;CL:0000473,1.34e-23,48;CL:0000234,1.34e-23,48;CL:0000766,1.76e-19,72;CL:0002194,8.27e-19,59;CL:0000576,8.27e-19,59;CL:0000040,8.27e-19,59;CL:0000559,8.27e-19,59;CL:0002009,3.44e-18,61;CL:0000839,8.38e-17,66;CL:0000557,1.50e-16,67;CL:0000763,7.17e-13,108;CL:0000049,7.17e-13,108;CL:0002545,2.49e-10,2;CL:0000738,4.09e-10,136;CL:0002087,1.66e-09,115;CL:0002031,4.33e-09,120;CL:1000413,6.36e-09,9;CL:0002032,1.89e-08,161;CL:0000837,1.89e-08,161;CL:0000037,4.52e-08,168;CL:0000988,1.26e-07,177;CL:0000775,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.77e-13!18;UBERON:0004638!1.77e-13!18;UBERON:0004852!1.77e-13!18;UBERON:0003915!3.50e-12!9;UBERON:0004700!3.50e-12!9;UBERON:0001917!3.50e-12!9;UBERON:0003081!3.86e-12!216;UBERON:0006914!1.30e-10!25;UBERON:0000487!1.59e-10!22;UBERON:0002193!1.93e-10!112;UBERON:0002390!1.56e-08!102;UBERON:0003061!1.56e-08!102;UBERON:0000476!5.95e-07!3;UBERON:0000920!5.95e-07!3;UBERON:0002371!7.90e-07!80;UBERON:0002405!9.90e-07!115 | |ontology_enrichment_uberon=UBERON:0001986!1.77e-13!18;UBERON:0004638!1.77e-13!18;UBERON:0004852!1.77e-13!18;UBERON:0003915!3.50e-12!9;UBERON:0004700!3.50e-12!9;UBERON:0001917!3.50e-12!9;UBERON:0003081!3.86e-12!216;UBERON:0006914!1.30e-10!25;UBERON:0000487!1.59e-10!22;UBERON:0002193!1.93e-10!112;UBERON:0002390!1.56e-08!102;UBERON:0003061!1.56e-08!102;UBERON:0000476!5.95e-07!3;UBERON:0000920!5.95e-07!3;UBERON:0002371!7.90e-07!80;UBERON:0002405!9.90e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005800;2.99e-10;2!UBERON:0001515;2.99e-10;2!UBERON:0003915;6.88e-09;9!UBERON:0004700;6.88e-09;9!UBERON:0001917;6.88e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-14,76;UBERON:0001474,1.76e-13,82;UBERON:0004765,2.96e-12,90;UBERON:0002405,7.54e-12,93;UBERON:0002390,3.17e-11,98;UBERON:0003061,3.17e-11,98;UBERON:0001434,5.40e-11,100;UBERON:0005800,2.49e-10,2;UBERON:0001515,2.49e-10,2;UBERON:0002193,3.77e-10,108;UBERON:0003915,6.36e-09,9;UBERON:0004700,6.36e-09,9;UBERON:0001917,6.36e-09,9;UBERON:0003081,3.56e-08,203 | |||
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| ||
|short_description=p@chr19:14546214..14546245,+ | |short_description=p@chr19:14546214..14546245,+ | ||
}} | }} |
Latest revision as of 04:23, 26 July 2015
Short description: | p@chr19:14546214..14546245, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:14546214..14546245, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.53e-72 | 9 |
CD14-positive, CD16-positive monocyte | 4.53e-72 | 9 |
non-classical monocyte | 2.40e-55 | 3 |
CD14-low, CD16-positive monocyte | 2.40e-55 | 3 |
classical monocyte | 5.16e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.16e-27 | 42 |
defensive cell | 1.34e-23 | 48 |
phagocyte | 1.34e-23 | 48 |
myeloid leukocyte | 1.76e-19 | 72 |
monopoietic cell | 8.27e-19 | 59 |
monocyte | 8.27e-19 | 59 |
monoblast | 8.27e-19 | 59 |
promonocyte | 8.27e-19 | 59 |
macrophage dendritic cell progenitor | 3.44e-18 | 61 |
myeloid lineage restricted progenitor cell | 8.38e-17 | 66 |
granulocyte monocyte progenitor cell | 1.50e-16 | 67 |
myeloid cell | 7.17e-13 | 108 |
common myeloid progenitor | 7.17e-13 | 108 |
thoracic aorta endothelial cell | 2.49e-10 | 2 |
leukocyte | 4.09e-10 | 136 |
nongranular leukocyte | 1.66e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.33e-09 | 120 |
endothelial cell of artery | 6.36e-09 | 9 |
hematopoietic oligopotent progenitor cell | 1.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-08 | 161 |
hematopoietic stem cell | 4.52e-08 | 168 |
hematopoietic cell | 1.26e-07 | 177 |
neutrophil | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-14 | 76 |
bone element | 1.76e-13 | 82 |
skeletal element | 2.96e-12 | 90 |
immune system | 7.54e-12 | 93 |
hematopoietic system | 3.17e-11 | 98 |
blood island | 3.17e-11 | 98 |
skeletal system | 5.40e-11 | 100 |
segment of aorta | 2.49e-10 | 2 |
thoracic aorta | 2.49e-10 | 2 |
hemolymphoid system | 3.77e-10 | 108 |
endothelial tube | 6.36e-09 | 9 |
arterial system endothelium | 6.36e-09 | 9 |
endothelium of artery | 6.36e-09 | 9 |
lateral plate mesoderm | 3.56e-08 | 203 |