FFCP PHASE1:Hg19::chr1:154942390..154942401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:154942390..154942401,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr1:154942390..154942401,- | |description=CAGE_peak_at_chr1:154942390..154942401,- | ||
|id=chr1:154942390..154942401,- | |id=chr1:154942390..154942401,- | ||
|ontology_enrichment_celltype=CL:0000064!5.98e-11!3;CL:0005012!5.98e-11!3;CL:0000067!5.98e-11!3;CL:0002304!5.98e-11!3;CL:0000306!3.72e-08!4;CL:0002222!3.72e-08!4;CL:0002224!3.72e-08!4 | |ontology_enrichment_celltype=CL:0000064!5.98e-11!3;CL:0005012!5.98e-11!3;CL:0000067!5.98e-11!3;CL:0002304!5.98e-11!3;CL:0000306!3.72e-08!4;CL:0002222!3.72e-08!4;CL:0002224!3.72e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;3.27e-23;3!CL:0000737;8.69e-18;4!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.27e-23,3;CL:0000513,3.27e-23,3;CL:0000737,8.69e-18,4;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000513;3.27e-23;3 | |||
|ontology_enrichment_disease=DOID:3371!3.06e-09!1;DOID:4549!3.06e-09!1;DOID:5861!3.06e-09!1;DOID:6496!3.06e-09!1;DOID:6193!1.05e-08!1 | |ontology_enrichment_disease=DOID:3371!3.06e-09!1;DOID:4549!3.06e-09!1;DOID:5861!3.06e-09!1;DOID:6496!3.06e-09!1;DOID:6193!1.05e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001778!5.98e-11!3;UBERON:0001775!5.98e-11!3;UBERON:0007625!6.69e-11!11;UBERON:0002134!3.87e-09!1;UBERON:0005208!3.87e-09!1;UBERON:0005946!3.87e-09!1;UBERON:0005965!3.87e-09!1;UBERON:0002078!3.87e-09!1;UBERON:0000076!7.89e-09!8;UBERON:0001801!1.35e-08!14;UBERON:0000488!1.99e-08!4;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0010077!3.72e-08!4;UBERON:0005389!3.72e-08!4;UBERON:0000484!3.72e-08!4;UBERON:0002546!3.72e-08!4;UBERON:0000965!3.72e-08!4;UBERON:0001803!3.72e-08!4;UBERON:0003073!3.72e-08!4;UBERON:0005426!3.72e-08!4;UBERON:0002465!4.32e-07!10 | |ontology_enrichment_uberon=UBERON:0001778!5.98e-11!3;UBERON:0001775!5.98e-11!3;UBERON:0007625!6.69e-11!11;UBERON:0002134!3.87e-09!1;UBERON:0005208!3.87e-09!1;UBERON:0005946!3.87e-09!1;UBERON:0005965!3.87e-09!1;UBERON:0002078!3.87e-09!1;UBERON:0000076!7.89e-09!8;UBERON:0001801!1.35e-08!14;UBERON:0000488!1.99e-08!4;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0010077!3.72e-08!4;UBERON:0005389!3.72e-08!4;UBERON:0000484!3.72e-08!4;UBERON:0002546!3.72e-08!4;UBERON:0000965!3.72e-08!4;UBERON:0001803!3.72e-08!4;UBERON:0003073!3.72e-08!4;UBERON:0005426!3.72e-08!4;UBERON:0002465!4.32e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001871;9.89e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0001871,9.89e-11,6 | |||
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|short_description=p@chr1:154942390..154942401,- | |short_description=p@chr1:154942390..154942401,- | ||
}} | }} |
Latest revision as of 22:07, 27 July 2015
Short description: | p@chr1:154942390..154942401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154942390..154942401, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.27e-23 | 3 |
cardiac muscle myoblast | 3.27e-23 | 3 |
striated muscle cell | 8.69e-18 | 4 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
temporal lobe | 9.89e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |