FFCP PHASE1:Hg19::chr17:39740633..39740663,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39740633..39740663,-
|short_description=p3@KRT14
|description=CAGE_peak_3_at_KRT14_5end
|association_with_transcript=59bp_to_ENST00000476662_5end
|Entrez...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3861 | |EntrezGene=3861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6416 | |HGNC=6416 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000476662_5end | |||
|cluster_id=chr17:39740633..39740663,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_3_at_KRT14_5end | |||
|id=chr17:39740633..39740663,- | |||
|ontology_enrichment_celltype=CL:0002076!7.71e-27!43;CL:0002159!2.37e-18!13;CL:0000223!1.21e-17!59;CL:0002368!1.64e-17!13;CL:0000622!2.27e-13!5;CL:0000066!3.08e-12!254;CL:0002251!3.52e-12!21;CL:0000154!4.74e-11!6;CL:0002202!4.61e-10!9;CL:0002632!4.61e-10!9;CL:0000244!1.66e-09!4;CL:0000731!1.66e-09!4;CL:0002623!7.09e-09!3;CL:0002328!8.24e-09!3;CL:0000068!1.92e-08!3;CL:0000069!1.92e-08!3;CL:0000307!1.92e-08!3;CL:0000377!1.92e-08!3;CL:0002077!2.49e-08!33;CL:0002621!2.63e-08!3;CL:0000362!3.61e-08!8;CL:0002166!3.78e-08!3;CL:0000240!2.11e-07!6;CL:0000311!2.11e-07!6;CL:0000079!2.11e-07!6;CL:0000237!2.11e-07!6;CL:0000036!2.11e-07!6;CL:0000357!2.11e-07!6;CL:0000114!2.11e-07!6;CL:0000150!3.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;8.89e-27;14!CL:0002076;5.15e-25;42!CL:0002368;8.66e-23;13!CL:0000622;1.94e-20;5!CL:0000154;5.57e-17;6!CL:0002202;1.00e-15;9!CL:0002632;1.00e-15;9!CL:0002251;1.00e-14;20!CL:0002623;2.99e-13;3!CL:0002328;3.96e-13;3!CL:0000307;1.49e-12;3!CL:0002621;2.16e-12;3!CL:0002166;5.86e-12;3!CL:0000240;2.72e-11;6!CL:0000311;2.72e-11;6!CL:0000079;2.72e-11;6!CL:0000237;2.72e-11;6!CL:0000362;3.17e-11;9!CL:0000150;3.31e-11;9!CL:0002327;1.74e-09;4!CL:0000575;2.29e-09;2!CL:0002077;4.57e-09;34!CL:0000317;6.34e-09;2!CL:1000448;6.34e-09;2!CL:0002308;6.34e-09;2!CL:0002140;6.34e-09;2!CL:0000244;9.09e-09;4!CL:0000731;9.09e-09;4!CL:0000312;4.00e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.60e-32,42;CL:0002159,7.25e-27,14;CL:0002368,9.87e-23,13;CL:0000223,3.80e-22,58;CL:0000622,2.02e-20,5;CL:0000154,5.76e-17,6;CL:0002202,9.92e-16,9;CL:0002632,9.92e-16,9;CL:0000066,1.37e-15,253;CL:0002251,1.06e-14,20;CL:0002623,3.05e-13,3;CL:0002328,3.89e-13,3;CL:0000068,1.49e-12,3;CL:0000069,1.49e-12,3;CL:0000307,1.49e-12,3;CL:0000377,1.49e-12,3;CL:0002621,2.47e-12,3;CL:0002166,4.40e-12,3;CL:0000240,2.69e-11,6;CL:0000311,2.69e-11,6;CL:0000079,2.69e-11,6;CL:0000237,2.69e-11,6;CL:0000036,2.69e-11,6;CL:0000357,2.69e-11,6;CL:0000114,2.69e-11,6;CL:0000362,3.17e-11,9;CL:0000150,3.38e-11,9;CL:0002077,7.47e-10,34;CL:0002327,1.70e-09,4;CL:0000575,2.29e-09,2;CL:0000317,6.47e-09,2;CL:1000448,6.47e-09,2;CL:0002308,6.47e-09,2;CL:0002140,6.47e-09,2;CL:0000244,8.97e-09,4;CL:0000731,8.97e-09,4;CL:0000312,3.96e-08,5;CL:0002321,6.44e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.49e-12;3!CL:0000223;5.32e-12;58!CL:0000357;2.72e-11;6!CL:0000114;2.72e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!5.68e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!5.65e-17!21;UBERON:0001004!2.61e-14!72;UBERON:0000165!5.15e-14!28;UBERON:0000930!5.15e-14!28;UBERON:0000161!3.68e-12!35;UBERON:0004119!1.27e-11!169;UBERON:0000925!1.27e-11!169;UBERON:0006595!1.27e-11!169;UBERON:0003102!1.63e-10!95;UBERON:0001044!1.74e-10!6;UBERON:0003293!1.74e-10!6;UBERON:0003294!1.74e-10!6;UBERON:0010047!1.74e-10!6;UBERON:0000167!1.74e-10!6;UBERON:0000078!2.50e-09!18;UBERON:0001444!2.82e-09!48;UBERON:0004815!8.24e-09!3;UBERON:0002031!8.24e-09!3;UBERON:0001949!2.63e-08!3;UBERON:0003124!2.97e-08!7;UBERON:0003408!3.31e-08!10;UBERON:0007196!5.20e-08!14;UBERON:0001558!5.20e-08!14;UBERON:0001723!8.87e-08!3;UBERON:0001033!8.87e-08!3;UBERON:0010056!8.87e-08!3;UBERON:0000365!1.34e-07!5;UBERON:0000065!1.42e-07!53;UBERON:0005631!1.51e-07!14;UBERON:0000158!1.51e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.13e-15;28!UBERON:0004815;3.96e-13;3!UBERON:0002031;3.96e-13;3!UBERON:0001949;2.16e-12;3!UBERON:0000161;3.63e-12;19!UBERON:0000166;3.63e-12;19!UBERON:0001044;5.99e-11;6!UBERON:0003293;5.99e-11;6!UBERON:0003294;5.99e-11;6!UBERON:0010047;5.99e-11;6!UBERON:0003408;5.99e-11;6!UBERON:0000167;5.99e-11;6!UBERON:0000486;8.78e-11;12!UBERON:0001911;1.74e-09;4!UBERON:0001003;3.75e-09;15!UBERON:0007376;3.75e-09;15!UBERON:0007196;3.75e-09;15!UBERON:0001558;3.75e-09;15!UBERON:0001708;4.41e-09;4!UBERON:0008895;4.41e-09;4!UBERON:0002419;6.34e-09;2!UBERON:0007771;6.34e-09;2!UBERON:0003297;6.34e-09;2!UBERON:0001821;6.34e-09;2!UBERON:0003487;6.34e-09;2!UBERON:0001820;6.34e-09;2!UBERON:0010371;8.95e-09;31!UBERON:0002365;9.96e-09;31!UBERON:0002330;9.96e-09;31!UBERON:0002185;4.95e-08;5!UBERON:0003729;2.08e-07;13!UBERON:0011159;2.39e-07;5!UBERON:0000365;4.23e-07;5!UBERON:0007811;4.29e-07;52!UBERON:0001041;6.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.87e-17,99;UBERON:0000166,3.72e-16,22;UBERON:0001004,1.75e-14,74;UBERON:0000165,2.54e-14,29;UBERON:0000930,2.54e-14,29;UBERON:0000033,2.84e-14,56;UBERON:0000161,3.62e-13,36;UBERON:0004815,3.89e-13,3;UBERON:0002031,3.89e-13,3;UBERON:0000153,1.59e-12,62;UBERON:0007811,1.59e-12,62;UBERON:0001949,2.47e-12,3;UBERON:0004119,5.34e-12,160;UBERON:0000925,5.34e-12,160;UBERON:0006595,5.34e-12,160;UBERON:0001044,5.55e-11,6;UBERON:0003293,5.55e-11,6;UBERON:0003294,5.55e-11,6;UBERON:0010047,5.55e-11,6;UBERON:0000167,5.55e-11,6;UBERON:0001444,7.11e-11,49;UBERON:0001911,1.70e-09,4;UBERON:0005333,1.70e-09,4;UBERON:0008425,1.70e-09,4;UBERON:0005311,1.70e-09,4;UBERON:0005631,3.13e-09,14;UBERON:0000158,3.13e-09,14;UBERON:0001708,3.57e-09,4;UBERON:0008895,3.57e-09,4;UBERON:0007196,3.73e-09,15;UBERON:0001558,3.73e-09,15;UBERON:0001003,3.84e-09,15;UBERON:0007376,3.84e-09,15;UBERON:0007383,3.84e-09,15;UBERON:0002419,6.47e-09,2;UBERON:0007771,6.47e-09,2;UBERON:0003297,6.47e-09,2;UBERON:0001821,6.47e-09,2;UBERON:0003487,6.47e-09,2;UBERON:0001820,6.47e-09,2;UBERON:0005089,6.47e-09,2;UBERON:0005088,6.47e-09,2;UBERON:0002365,8.87e-09,31;UBERON:0002330,8.87e-09,31;UBERON:0003124,1.19e-08,7;UBERON:0002185,4.89e-08,5;UBERON:0011159,2.02e-07,5;UBERON:0003729,2.18e-07,13;UBERON:0004121,2.37e-07,171;UBERON:0000924,2.37e-07,171;UBERON:0006601,2.37e-07,171;UBERON:0000365,4.19e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3409004078046,18.9759728830298,12.9413903558376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3860398019464,38.5615820495807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,6.3776081543888,4.09119180886252,7.7437240755031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.889296521606,22.4803506515239,47.650732923113,8.51813695458472,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,4.53551746136921,4.96212840348353,3.67189943081678,5.81267877027924,27.6035528998952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,0,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41114234667227,3.86740153530765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44559322797703,23.4021688573148,0,0,0,0,0,0,0,0,0,0.991709492165869,2.49847087574638,2.29702882490251,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42621718537356,15.4169523373231,7.62236894029258,0,1.29151611801369,1.68471475667626,4.43430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2209907826714,0,9.82914246717543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.881931576729399,0.0870592065804026,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1417166699078,0.115525666150338,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,12.0185375214561,30.9000443540049,36.6367620761469,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0.892769693028288,0,0,0,1.83491713361816,0.143339583151451,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,22.424825033387,4.10679961302337,0.606168477131288,0.358611026963382,0,0,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3409004078046,18.9759728830298,12.9413903558376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3860398019464,38.5615820495807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,6.3776081543888,4.09119180886252,7.7437240755031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.889296521606,22.4803506515239,47.650732923113,8.51813695458472,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,4.53551746136921,4.96212840348353,3.67189943081678,5.81267877027924,27.6035528998952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,0,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41114234667227,3.86740153530765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44559322797703,23.4021688573148,0,0,0,0,0,0,0,0,0,0.991709492165869,2.49847087574638,2.29702882490251,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42621718537356,15.4169523373231,7.62236894029258,0,1.29151611801369,1.68471475667626,4.43430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2209907826714,0,9.82914246717543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.881931576729399,0.0870592065804026,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1417166699078,0.115525666150338,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,12.0185375214561,30.9000443540049,36.6367620761469,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0.892769693028288,0,0,0,1.83491713361816,0.143339583151451,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,22.424825033387,4.10679961302337,0.606168477131288,0.358611026963382,0,0,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0 | ||
|short_description=p3@KRT14 | |||
}} | }} |
Latest revision as of 06:12, 20 September 2015
Short description: | p3@KRT14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT14_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 59bp_to_ENST00000476662_5end |
EntrezGene: | KRT14 |
HGNC: | 6416 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data