FFCP PHASE1:Hg19::chr17:39845134..39845142,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39845134..39845142,+
|short_description=p1@EIF1
|description=CAGE_peak_1_at_EIF1_5end
|association_with_transcript=0bp_to_ENST00000462917_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10209 | |EntrezGene=10209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3249 | |HGNC=3249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462917_5end | |||
|cluster_id=chr17:39845134..39845142,+ | |||
|coexpression_cluster_id=C290 | |||
|description=CAGE_peak_1_at_EIF1_5end | |||
|id=chr17:39845134..39845142,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.25e-26!42;CL:0000860!2.11e-22!45;CL:0000738!1.92e-18!140;CL:0000766!5.65e-15!76;CL:0002087!7.21e-15!119;CL:0002031!3.84e-14!124;CL:0000003!4.87e-14!722;CL:0002009!1.72e-13!65;CL:0002194!8.10e-13!63;CL:0000576!8.10e-13!63;CL:0000040!8.10e-13!63;CL:0000559!8.10e-13!63;CL:0002320!5.67e-12!365;CL:0000839!9.22e-12!70;CL:0000557!2.50e-11!71;CL:0000134!1.32e-10!358;CL:0002371!5.30e-10!591;CL:0000988!2.39e-09!182;CL:0000048!3.59e-09!430;CL:0000063!3.94e-09!578;CL:0000144!4.56e-09!625;CL:0000723!4.89e-09!436;CL:0000012!7.87e-09!682;CL:0000037!1.09e-08!172;CL:0000566!1.09e-08!172;CL:0000548!2.66e-08!679;CL:0000004!2.66e-08!679;CL:0000255!2.66e-08!679;CL:0000034!2.70e-08!444;CL:0002032!1.24e-07!165;CL:0000837!1.24e-07!165;CL:0000219!2.56e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.22e-19;33!CL:0002057;3.22e-19;33!CL:0000473;2.57e-13;39!CL:0000234;2.57e-13;39!CL:0000576;1.81e-12;48!CL:0000766;2.45e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.25e-26,42;CL:0002057,6.25e-26,42;CL:0000473,3.39e-22,48;CL:0000234,3.39e-22,48;CL:0000738,8.71e-20,136;CL:0000766,9.22e-17,72;CL:0002087,3.71e-16,115;CL:0002031,2.37e-15,120;CL:0002009,2.40e-15,61;CL:0002194,1.20e-14,59;CL:0000576,1.20e-14,59;CL:0000040,1.20e-14,59;CL:0000559,1.20e-14,59;CL:0000839,2.41e-13,66;CL:0000557,7.50e-13,67;CL:0002320,1.31e-12,361;CL:0000134,3.34e-11,354;CL:0000988,4.60e-10,177;CL:0000048,6.40e-10,427;CL:0000723,8.89e-10,433;CL:0000037,2.17e-09,168;CL:0000034,5.35e-09,441;CL:0002032,2.74e-08,161;CL:0000837,2.74e-08,161;CL:0000219,8.84e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.38e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.65e-12!216;UBERON:0002371!9.06e-11!80;UBERON:0002390!1.59e-10!102;UBERON:0003061!1.59e-10!102;UBERON:0002384!1.98e-10!375;UBERON:0002193!1.82e-09!112;UBERON:0001474!7.57e-09!86;UBERON:0004765!8.12e-08!101;UBERON:0001434!8.12e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.98e-12,203;UBERON:0002371,4.10e-12,76;UBERON:0002390,1.22e-11,98;UBERON:0003061,1.22e-11,98;UBERON:0002384,5.20e-11,371;UBERON:0004765,9.13e-11,90;UBERON:0002193,1.94e-10,108;UBERON:0001474,5.97e-10,82;UBERON:0001434,2.08e-09,100;UBERON:0002405,1.35e-08,93;UBERON:0002204,7.23e-08,167 | |||
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| ||
|short_description=p1@EIF1 | |||
}} | }} |
Latest revision as of 06:55, 20 September 2015
Short description: | p1@EIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EIF1_5end |
Coexpression cluster: | C290_Eosinophils_CD14_Basophils_Mast_CD4_CD8_immature |
Association with transcript: | 0bp_to_ENST00000462917_5end |
EntrezGene: | EIF1 |
HGNC: | 3249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.25e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.25e-26 | 42 |
defensive cell | 3.39e-22 | 48 |
phagocyte | 3.39e-22 | 48 |
leukocyte | 8.71e-20 | 136 |
myeloid leukocyte | 9.22e-17 | 72 |
nongranular leukocyte | 3.71e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.37e-15 | 120 |
macrophage dendritic cell progenitor | 2.40e-15 | 61 |
monopoietic cell | 1.20e-14 | 59 |
monocyte | 1.20e-14 | 59 |
monoblast | 1.20e-14 | 59 |
promonocyte | 1.20e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.41e-13 | 66 |
granulocyte monocyte progenitor cell | 7.50e-13 | 67 |
connective tissue cell | 1.31e-12 | 361 |
mesenchymal cell | 3.34e-11 | 354 |
hematopoietic cell | 4.60e-10 | 177 |
multi fate stem cell | 6.40e-10 | 427 |
somatic stem cell | 8.89e-10 | 433 |
hematopoietic stem cell | 2.17e-09 | 168 |
stem cell | 5.35e-09 | 441 |
hematopoietic oligopotent progenitor cell | 2.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-08 | 161 |
motile cell | 8.84e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.98e-12 | 203 |
bone marrow | 4.10e-12 | 76 |
hematopoietic system | 1.22e-11 | 98 |
blood island | 1.22e-11 | 98 |
connective tissue | 5.20e-11 | 371 |
skeletal element | 9.13e-11 | 90 |
hemolymphoid system | 1.94e-10 | 108 |
bone element | 5.97e-10 | 82 |
skeletal system | 2.08e-09 | 100 |
immune system | 1.35e-08 | 93 |
musculoskeletal system | 7.23e-08 | 167 |