FFCP PHASE1:Hg19::chr17:42634734..42634754,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:42634734..42634754,+
|short_description=p3@FZD2
|description=CAGE_peak_3_at_FZD2_5end
|association_with_transcript=-57bp_to_NM_001466_5end
|EntrezGene=25...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2535 | |EntrezGene=2535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4040 | |HGNC=4040 | ||
|TSSclassifier=strong | |||
|UniProt=Q14332,Q86UZ8 | |UniProt=Q14332,Q86UZ8 | ||
|association_with_transcript=-57bp_to_NM_001466_5end | |||
|cluster_id=chr17:42634734..42634754,+ | |||
|coexpression_cluster_id=C1781 | |||
|description=CAGE_peak_3_at_FZD2_5end | |||
|id=chr17:42634734..42634754,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.89e-31!180;CL:0000057!2.67e-18!75;CL:0000548!6.37e-11!679;CL:0000004!6.37e-11!679;CL:0000255!6.37e-11!679;CL:0000012!3.16e-10!682;CL:0000183!4.84e-09!59;CL:0002620!5.68e-09!23;CL:0000393!1.09e-08!60;CL:0000211!1.09e-08!60;CL:0000680!2.55e-08!57;CL:0000056!2.55e-08!57;CL:0000355!2.55e-08!57;CL:0000133!4.30e-08!59;CL:0000187!6.55e-08!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.42e-10;23!CL:0000057;8.51e-09;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.52e-20,76;CL:0002620,3.81e-10,23;CL:0000393,3.50e-09,61;CL:0000211,3.50e-09,61;CL:0000680,3.85e-09,58;CL:0000056,3.85e-09,58;CL:0000355,3.85e-09,58;CL:0000187,1.25e-08,55;CL:0000133,3.26e-08,59;CL:0002321,6.40e-07,250;CL:0000222,6.40e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.02e-10!83;UBERON:0002329!2.02e-10!83;UBERON:0003077!2.02e-10!83;UBERON:0003059!2.02e-10!83;UBERON:0007282!2.02e-10!83;UBERON:0009618!2.02e-10!83;UBERON:0007285!2.02e-10!83;UBERON:0000475!4.98e-09!365;UBERON:0004290!8.09e-09!70;UBERON:0000486!9.36e-08!82;UBERON:0004923!2.25e-07!57;UBERON:0005256!2.59e-07!143;UBERON:0001134!6.09e-07!61;UBERON:0002036!6.09e-07!61;UBERON:0003082!6.09e-07!61;UBERON:0002097!6.33e-07!40;UBERON:0007625!6.40e-07!11;UBERON:0003102!8.05e-07!95;UBERON:0002100!8.58e-07!216;UBERON:0002199!8.69e-07!45;UBERON:0002416!8.69e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.53e-08;11!UBERON:0006876;5.72e-08;11!UBERON:0002384;2.66e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.09e-10,73;UBERON:0002329,1.36e-09,71;UBERON:0003059,1.36e-09,71;UBERON:0007282,1.36e-09,71;UBERON:0004290,1.36e-09,71;UBERON:0009618,1.36e-09,71;UBERON:0007503,2.28e-09,78;UBERON:0003077,2.98e-09,72;UBERON:0007285,2.98e-09,72;UBERON:0007625,2.29e-08,11;UBERON:0006876,4.77e-08,11;UBERON:0000486,6.68e-08,83;UBERON:0001134,9.64e-08,62;UBERON:0002036,9.64e-08,62;UBERON:0003082,9.64e-08,62;UBERON:0002385,3.97e-07,64;UBERON:0001015,3.97e-07,64;UBERON:0000383,3.97e-07,64;UBERON:0003104,4.22e-07,160;UBERON:0009142,4.22e-07,160 | |||
|phase1_expression=2.54349730978779,1.2846031433459,0.986680828671798,3.00219895059391,3.5756887554183,1.74467704820074,2.53299878168311,0,0.261185628199839,2.21160542851358,4.18680700783456,0.655324116390517,1.05506791291381,5.321953177282,6.2965501388304,4.03395087871065,2.41077811209591,5.11217063271161,1.95173119516203,6.64853713614655,9.79203317972414,1.88072832886853,6.01095572975219,7.25434452886286,6.02604670055053,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.434021741431704,2.01523926815932,1.29557466407592,1.54545340580512,0,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.639312809217652,0,1.50401373190767,0.144846518960824,0,0.973269740605272,8.79173799625831,5.09977614163897,6.67544371267758,0.654895377488563,0,0,2.59637914923747,1.74129737299267,2.26028532882071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0.872188104285069,2.98183171017191,6.71141711822273,4.50191214764944,14.3418310374407,3.54668382198357,6.72813120170769,2.1349799145941,5.42668606517752,1.8672662123986,0.404132016209064,0.326923806226917,17.4061041791671,25.35174067712,8.90421440968427,1.5608003841516,0.570471821544449,0.298897361103602,3.05329696473789,2.91371299862637,2.80901613404497,1.22492502752936,10.6865856061238,1.23990937410919,3.56400857184616,6.67620709052104,0.910161361938026,5.74894513452991,6.90178067211671,5.12985931475053,0.554128230968366,7.02364193409341,5.21029252858333,6.00952235626387,0.680593098960126,5.38168907066586,6.83383644219416,4.02670612203168,9.30282397861647,4.74041634496819,6.69865404118636,5.3973888336161,6.07594796068558,3.31285817548075,5.55354303337052,7.36399189138395,5.81925804547723,13.845374108148,8.06016785821122,8.64759020783487,0.773043412653187,0.545492241181669,0,0.731842236777572,2.25300606146525,1.85910308591229,3.52447587052259,1.51392510525377,1.82488679537915,23.4674298494724,27.0161194041012,12.4321429217232,3.71494342425583,4.33127689001751,1.53798840051797,2.19160097101532,1.20505514941741,1.21323370005633,0.871517776369625,1.66089433377768,1.07865046528132,2.15843611637881,0.38474715694639,0,1.40241773803446,2.4694440679884,4.41026134156626,0,0,0,0,2.58275720940538,2.74508496477641,0,1.1240175325762,0.301586917234893,0.370353780634118,11.4032906858614,0,10.1031939417691,6.02838105870399,6.92711295991348,0,0,0,1.58040879591855,0.858486162094873,1.47730203652438,0.234004265139238,0.297262324577456,0,0.671928512795438,0,0.179117045405697,0.290633938513962,1.15014803749563,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0.285826432630578,13.2314679527526,6.10344096366592,13.200891447771,2.19761916788222,3.57656445851882,1.690605505112,9.0418959638856,7.28052058379563,5.91576960802927,2.83698264046557,5.59486575933809,1.14382394926518,2.17048642156577,3.29296134712308,0,1.06617584622764,0.791951872933429,0.904318131178758,0.871533458600294,0.299918973546171,0,0.502257091432126,0,6.9491208092559,17.2292903751171,4.27910715122155,1.59259437334337,2.4657158706046,1.43248770591916,0.672510863961164,0,0,0,0.508189248444927,1.30139853857622,2.31986643833309,3.18280904135263,1.27587750330633,0,0,0,8.09763845346323,12.0040925054323,6.78162559249339,4.99130067673937,5.35286966391485,8.51593041183247,7.61419197452636,4.8151375956435,6.82222512167955,15.5209606938757,7.3064815838898,7.55913591020983,6.95068915744663,27.2163608873209,15.7845974952994,0,0,0,0.909382714338778,3.32870879020994,7.25736703991233,1.98486246255021,2.91577749247319,3.36792113319688,2.30650468660262,2.04682899626681,5.62988724002626,4.45254199334973,2.46735510084249,2.30830242907065,1.47828880824856,1.03850885836724,1.62694529843943,1.57117284469109,0,0,2.64073230778596,8.01201139229555,3.01586154406675,1.35359883872224,0.539107359730903,5.49044838423799,0,0.422206515571503,0,0,0.215915916102139,0,3.52230368807009,8.02703638167765,0.254876273045038,0,3.80587083027703,0,0,5.38545262744417,9.84043937099117,6.83294628795036,0.103041011647722,0.0915694648183434,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,5.60690166094307,1.84858340537573,1.38153307253517,1.7918754422989,3.75970857038958,5.80066775656914,3.15338521439573,7.12256285173899,0,0,0,0.30347334256665,1.39453664789186,5.66662224295152,0,0.616067160352178,0.532306030317022,2.60979897622522,0.37064843820784,0.572499546967965,9.67611760335135,6.96034734381197,4.00323407240032,6.39744478278335,8.13084077264449,1.59101623962968,0,3.77732160924961,3.84351841630477,4.71249609382746,0.404364963146632,0,1.68503382495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|phase1_expression=2.54349730978779,1.2846031433459,0.986680828671798,3.00219895059391,3.5756887554183,1.74467704820074,2.53299878168311,0,0.261185628199839,2.21160542851358,4.18680700783456,0.655324116390517,1.05506791291381,5.321953177282,6.2965501388304,4.03395087871065,2.41077811209591,5.11217063271161,1.95173119516203,6.64853713614655,9.79203317972414,1.88072832886853,6.01095572975219,7.25434452886286,6.02604670055053,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.434021741431704,2.01523926815932,1.29557466407592,1.54545340580512,0,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.639312809217652,0,1.50401373190767,0.144846518960824,0,0.973269740605272,8.79173799625831,5.09977614163897,6.67544371267758,0.654895377488563,0,0,2.59637914923747,1.74129737299267,2.26028532882071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0.872188104285069,2.98183171017191,6.71141711822273,4.50191214764944,14.3418310374407,3.54668382198357,6.72813120170769,2.1349799145941,5.42668606517752,1.8672662123986,0.404132016209064,0.326923806226917,17.4061041791671,25.35174067712,8.90421440968427,1.5608003841516,0.570471821544449,0.298897361103602,3.05329696473789,2.91371299862637,2.80901613404497,1.22492502752936,10.6865856061238,1.23990937410919,3.56400857184616,6.67620709052104,0.910161361938026,5.74894513452991,6.90178067211671,5.12985931475053,0.554128230968366,7.02364193409341,5.21029252858333,6.00952235626387,0.680593098960126,5.38168907066586,6.83383644219416,4.02670612203168,9.30282397861647,4.74041634496819,6.69865404118636,5.3973888336161,6.07594796068558,3.31285817548075,5.55354303337052,7.36399189138395,5.81925804547723,13.845374108148,8.06016785821122,8.64759020783487,0.773043412653187,0.545492241181669,0,0.731842236777572,2.25300606146525,1.85910308591229,3.52447587052259,1.51392510525377,1.82488679537915,23.4674298494724,27.0161194041012,12.4321429217232,3.71494342425583,4.33127689001751,1.53798840051797,2.19160097101532,1.20505514941741,1.21323370005633,0.871517776369625,1.66089433377768,1.07865046528132,2.15843611637881,0.38474715694639,0,1.40241773803446,2.4694440679884,4.41026134156626,0,0,0,0,2.58275720940538,2.74508496477641,0,1.1240175325762,0.301586917234893,0.370353780634118,11.4032906858614,0,10.1031939417691,6.02838105870399,6.92711295991348,0,0,0,1.58040879591855,0.858486162094873,1.47730203652438,0.234004265139238,0.297262324577456,0,0.671928512795438,0,0.179117045405697,0.290633938513962,1.15014803749563,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0.285826432630578,13.2314679527526,6.10344096366592,13.200891447771,2.19761916788222,3.57656445851882,1.690605505112,9.0418959638856,7.28052058379563,5.91576960802927,2.83698264046557,5.59486575933809,1.14382394926518,2.17048642156577,3.29296134712308,0,1.06617584622764,0.791951872933429,0.904318131178758,0.871533458600294,0.299918973546171,0,0.502257091432126,0,6.9491208092559,17.2292903751171,4.27910715122155,1.59259437334337,2.4657158706046,1.43248770591916,0.672510863961164,0,0,0,0.508189248444927,1.30139853857622,2.31986643833309,3.18280904135263,1.27587750330633,0,0,0,8.09763845346323,12.0040925054323,6.78162559249339,4.99130067673937,5.35286966391485,8.51593041183247,7.61419197452636,4.8151375956435,6.82222512167955,15.5209606938757,7.3064815838898,7.55913591020983,6.95068915744663,27.2163608873209,15.7845974952994,0,0,0,0.909382714338778,3.32870879020994,7.25736703991233,1.98486246255021,2.91577749247319,3.36792113319688,2.30650468660262,2.04682899626681,5.62988724002626,4.45254199334973,2.46735510084249,2.30830242907065,1.47828880824856,1.03850885836724,1.62694529843943,1.57117284469109,0,0,2.64073230778596,8.01201139229555,3.01586154406675,1.35359883872224,0.539107359730903,5.49044838423799,0,0.422206515571503,0,0,0.215915916102139,0,3.52230368807009,8.02703638167765,0.254876273045038,0,3.80587083027703,0,0,5.38545262744417,9.84043937099117,6.83294628795036,0.103041011647722,0.0915694648183434,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,5.60690166094307,1.84858340537573,1.38153307253517,1.7918754422989,3.75970857038958,5.80066775656914,3.15338521439573,7.12256285173899,0,0,0,0.30347334256665,1.39453664789186,5.66662224295152,0,0.616067160352178,0.532306030317022,2.60979897622522,0.37064843820784,0.572499546967965,9.67611760335135,6.96034734381197,4.00323407240032,6.39744478278335,8.13084077264449,1.59101623962968,0,3.77732160924961,3.84351841630477,4.71249609382746,0.404364963146632,0,1.68503382495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| ||
|short_description=p3@FZD2 | |||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p3@FZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FZD2_5end |
Coexpression cluster: | C1781_anaplastic_Hair_Pericytes_mesothelioma_Fibroblast_lens_transitionalcell |
Association with transcript: | -57bp_to_NM_001466_5end |
EntrezGene: | FZD2 |
HGNC: | 4040 |
UniProt: | Q14332Q86UZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.52e-20 | 76 |
skin fibroblast | 3.81e-10 | 23 |
electrically responsive cell | 3.50e-09 | 61 |
electrically active cell | 3.50e-09 | 61 |
muscle precursor cell | 3.85e-09 | 58 |
myoblast | 3.85e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.85e-09 | 58 |
muscle cell | 1.25e-08 | 55 |
neurectodermal cell | 3.26e-08 | 59 |
embryonic cell | 6.40e-07 | 250 |
mesodermal cell | 6.40e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 9.09e-10 | 73 |
somite | 1.36e-09 | 71 |
presomitic mesoderm | 1.36e-09 | 71 |
presumptive segmental plate | 1.36e-09 | 71 |
dermomyotome | 1.36e-09 | 71 |
trunk paraxial mesoderm | 1.36e-09 | 71 |
epithelial vesicle | 2.28e-09 | 78 |
paraxial mesoderm | 2.98e-09 | 72 |
presumptive paraxial mesoderm | 2.98e-09 | 72 |
pigment epithelium of eye | 2.29e-08 | 11 |
vasculature of organ | 4.77e-08 | 11 |
multilaminar epithelium | 6.68e-08 | 83 |
skeletal muscle tissue | 9.64e-08 | 62 |
striated muscle tissue | 9.64e-08 | 62 |
myotome | 9.64e-08 | 62 |
muscle tissue | 3.97e-07 | 64 |
musculature | 3.97e-07 | 64 |
musculature of body | 3.97e-07 | 64 |
mesenchyme | 4.22e-07 | 160 |
entire embryonic mesenchyme | 4.22e-07 | 160 |