FFCP PHASE1:Hg19::chr11:18548407..18548424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7251 | |EntrezGene=7251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15971 | |HGNC=15971 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000545247_5end | |association_with_transcript=1bp_to_ENST00000545247_5end | ||
|cluster_id=chr11:18548407..18548424,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_TSG101_5end | |description=CAGE_peak_2_at_TSG101_5end | ||
|id=chr11:18548407..18548424,- | |id=chr11:18548407..18548424,- | ||
|ontology_enrichment_celltype=CL:0002057!1.50e-26!42;CL:0000766!8.94e-26!76;CL:0000860!3.09e-23!45;CL:0002009!2.49e-21!65;CL:0000557!9.19e-21!71;CL:0000839!2.25e-20!70;CL:0002194!2.58e-20!63;CL:0000576!2.58e-20!63;CL:0000040!2.58e-20!63;CL:0000559!2.58e-20!63;CL:0000738!2.11e-14!140;CL:0000763!1.05e-13!112;CL:0000049!1.05e-13!112;CL:0002031!1.71e-11!124;CL:0002087!3.62e-11!119;CL:0000037!8.39e-09!172;CL:0000566!8.39e-09!172;CL:0000988!1.62e-08!182;CL:0002032!1.64e-08!165;CL:0000837!1.64e-08!165;CL:0000081!6.13e-07!11;CL:0000094!9.15e-07!8 | |ontology_enrichment_celltype=CL:0002057!1.50e-26!42;CL:0000766!8.94e-26!76;CL:0000860!3.09e-23!45;CL:0002009!2.49e-21!65;CL:0000557!9.19e-21!71;CL:0000839!2.25e-20!70;CL:0002194!2.58e-20!63;CL:0000576!2.58e-20!63;CL:0000040!2.58e-20!63;CL:0000559!2.58e-20!63;CL:0000738!2.11e-14!140;CL:0000763!1.05e-13!112;CL:0000049!1.05e-13!112;CL:0002031!1.71e-11!124;CL:0002087!3.62e-11!119;CL:0000037!8.39e-09!172;CL:0000566!8.39e-09!172;CL:0000988!1.62e-08!182;CL:0002032!1.64e-08!165;CL:0000837!1.64e-08!165;CL:0000081!6.13e-07!11;CL:0000094!9.15e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-22;33!CL:0002057;2.23e-22;33!CL:0000473;1.76e-18;39!CL:0000234;1.76e-18;39!CL:0000576;3.78e-16;48!CL:0000766;3.38e-14;69!CL:0000081;8.54e-08;11!CL:0000094;1.71e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.57e-30,72;CL:0000860,8.83e-29,42;CL:0002057,8.83e-29,42;CL:0000473,3.49e-28,48;CL:0000234,3.49e-28,48;CL:0002009,2.10e-25,61;CL:0000557,6.10e-25,67;CL:0002194,2.89e-24,59;CL:0000576,2.89e-24,59;CL:0000040,2.89e-24,59;CL:0000559,2.89e-24,59;CL:0000839,3.83e-24,66;CL:0000738,1.41e-16,136;CL:0000763,4.75e-16,108;CL:0000049,4.75e-16,108;CL:0002031,1.06e-13,120;CL:0002087,3.97e-13,115;CL:0000037,2.22e-10,168;CL:0000988,3.25e-10,177;CL:0002032,5.12e-10,161;CL:0000837,5.12e-10,161;CL:0000081,2.03e-07,11;CL:0000094,3.13e-07,8;CL:0002393,9.71e-07,9;CL:0002397,9.71e-07,9;CL:0002139,9.93e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.25e-20!112;UBERON:0002390!8.97e-20!102;UBERON:0003061!8.97e-20!102;UBERON:0002371!7.06e-19!80;UBERON:0001474!2.72e-16!86;UBERON:0004765!1.60e-15!101;UBERON:0001434!1.60e-15!101;UBERON:0003081!2.03e-13!216;UBERON:0002405!1.32e-11!115;UBERON:0002204!1.18e-10!167 | |ontology_enrichment_uberon=UBERON:0002193!3.25e-20!112;UBERON:0002390!8.97e-20!102;UBERON:0003061!8.97e-20!102;UBERON:0002371!7.06e-19!80;UBERON:0001474!2.72e-16!86;UBERON:0004765!1.60e-15!101;UBERON:0001434!1.60e-15!101;UBERON:0003081!2.03e-13!216;UBERON:0002405!1.32e-11!115;UBERON:0002204!1.18e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.99e-24,108;UBERON:0002390,6.42e-24,98;UBERON:0003061,6.42e-24,98;UBERON:0002371,8.40e-23,76;UBERON:0002405,3.92e-20,93;UBERON:0001474,3.03e-19,82;UBERON:0004765,4.54e-19,90;UBERON:0003081,5.44e-19,203;UBERON:0001434,6.07e-17,100;UBERON:0000926,9.38e-14,315;UBERON:0004120,9.38e-14,315;UBERON:0006603,9.38e-14,315;UBERON:0002204,3.99e-11,167 | |||
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| ||
|short_description=p2@TSG101 | |short_description=p2@TSG101 | ||
}} | }} |
Latest revision as of 02:53, 17 September 2015
Short description: | p2@TSG101 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSG101_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 1bp_to_ENST00000545247_5end |
EntrezGene: | TSG101 |
HGNC: | 15971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.57e-30 | 72 |
classical monocyte | 8.83e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.83e-29 | 42 |
defensive cell | 3.49e-28 | 48 |
phagocyte | 3.49e-28 | 48 |
macrophage dendritic cell progenitor | 2.10e-25 | 61 |
granulocyte monocyte progenitor cell | 6.10e-25 | 67 |
monopoietic cell | 2.89e-24 | 59 |
monocyte | 2.89e-24 | 59 |
monoblast | 2.89e-24 | 59 |
promonocyte | 2.89e-24 | 59 |
myeloid lineage restricted progenitor cell | 3.83e-24 | 66 |
leukocyte | 1.41e-16 | 136 |
myeloid cell | 4.75e-16 | 108 |
common myeloid progenitor | 4.75e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.06e-13 | 120 |
nongranular leukocyte | 3.97e-13 | 115 |
hematopoietic stem cell | 2.22e-10 | 168 |
hematopoietic cell | 3.25e-10 | 177 |
hematopoietic oligopotent progenitor cell | 5.12e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.12e-10 | 161 |
blood cell | 2.03e-07 | 11 |
granulocyte | 3.13e-07 | 8 |
intermediate monocyte | 9.71e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.71e-07 | 9 |
endothelial cell of vascular tree | 9.93e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.99e-24 | 108 |
hematopoietic system | 6.42e-24 | 98 |
blood island | 6.42e-24 | 98 |
bone marrow | 8.40e-23 | 76 |
immune system | 3.92e-20 | 93 |
bone element | 3.03e-19 | 82 |
skeletal element | 4.54e-19 | 90 |
lateral plate mesoderm | 5.44e-19 | 203 |
skeletal system | 6.07e-17 | 100 |
mesoderm | 9.38e-14 | 315 |
mesoderm-derived structure | 9.38e-14 | 315 |
presumptive mesoderm | 9.38e-14 | 315 |
musculoskeletal system | 3.99e-11 | 167 |