FFCP PHASE1:Hg19::chr11:3026677..3026691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:3026677..3026691,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_at_chr11:3026677..3026691,- | |description=CAGE_peak_at_chr11:3026677..3026691,- | ||
|id=chr11:3026677..3026691,- | |id=chr11:3026677..3026691,- | ||
|ontology_enrichment_celltype=CL:0002602!3.86e-07!2 | |ontology_enrichment_celltype=CL:0002602!3.86e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.81e-23;5!CL:0000349;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.81e-23,5;CL:0000349,6.57e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.04e-07;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.89e-29!115;UBERON:0001049!4.98e-27!57;UBERON:0005068!4.98e-27!57;UBERON:0006241!4.98e-27!57;UBERON:0007135!4.98e-27!57;UBERON:0001017!1.63e-21!82;UBERON:0002616!2.26e-21!59;UBERON:0005743!3.37e-20!86;UBERON:0002780!2.30e-19!41;UBERON:0001890!2.30e-19!41;UBERON:0006240!2.30e-19!41;UBERON:0000955!6.61e-19!69;UBERON:0006238!6.61e-19!69;UBERON:0003075!8.32e-19!86;UBERON:0007284!8.32e-19!86;UBERON:0003080!8.35e-19!42;UBERON:0002346!1.14e-17!90;UBERON:0000073!1.21e-17!94;UBERON:0001016!1.21e-17!94;UBERON:0002791!2.07e-14!33;UBERON:0001893!6.65e-14!34;UBERON:0002020!1.01e-13!34;UBERON:0003528!1.01e-13!34;UBERON:0000153!2.31e-12!129;UBERON:0007811!2.31e-12!129;UBERON:0004121!4.81e-12!169;UBERON:0003056!1.19e-11!61;UBERON:0000924!1.40e-11!173;UBERON:0006601!1.40e-11!173;UBERON:0000033!5.00e-11!123;UBERON:0001896!6.21e-11!3;UBERON:0005290!6.21e-11!3;UBERON:0010096!6.21e-11!3;UBERON:0001869!1.21e-10!32;UBERON:0005174!2.31e-10!5;UBERON:0001137!2.31e-10!5;UBERON:0002298!5.26e-10!8;UBERON:0003076!1.85e-09!15;UBERON:0003057!1.85e-09!15;UBERON:0002619!7.66e-09!22;UBERON:0002308!1.16e-08!9;UBERON:0000125!1.16e-08!9;UBERON:0003127!6.92e-08!2;UBERON:0001950!1.07e-07!20;UBERON:0009663!1.12e-07!7;UBERON:0000956!1.23e-07!25;UBERON:0000203!1.23e-07!25;UBERON:0001873!1.41e-07!2;UBERON:0010122!1.41e-07!2;UBERON:0001894!1.50e-07!7;UBERON:0006222!1.50e-07!7;UBERON:0000341!1.66e-07!2;UBERON:0000025!2.29e-07!194;UBERON:0001897!3.86e-07!2;UBERON:0009568!3.86e-07!2;UBERON:0002216!3.86e-07!2;UBERON:0002209!3.86e-07!2;UBERON:0002213!3.86e-07!2;UBERON:0004267!3.86e-07!2;UBERON:0006444!3.86e-07!2;UBERON:0001995!3.86e-07!2;UBERON:0004715!3.86e-07!2;UBERON:0001468!3.86e-07!2;UBERON:0001130!3.86e-07!2;UBERON:0001066!3.86e-07!2;UBERON:0000062!4.25e-07!511;UBERON:0004111!7.97e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!5.89e-29!115;UBERON:0001049!4.98e-27!57;UBERON:0005068!4.98e-27!57;UBERON:0006241!4.98e-27!57;UBERON:0007135!4.98e-27!57;UBERON:0001017!1.63e-21!82;UBERON:0002616!2.26e-21!59;UBERON:0005743!3.37e-20!86;UBERON:0002780!2.30e-19!41;UBERON:0001890!2.30e-19!41;UBERON:0006240!2.30e-19!41;UBERON:0000955!6.61e-19!69;UBERON:0006238!6.61e-19!69;UBERON:0003075!8.32e-19!86;UBERON:0007284!8.32e-19!86;UBERON:0003080!8.35e-19!42;UBERON:0002346!1.14e-17!90;UBERON:0000073!1.21e-17!94;UBERON:0001016!1.21e-17!94;UBERON:0002791!2.07e-14!33;UBERON:0001893!6.65e-14!34;UBERON:0002020!1.01e-13!34;UBERON:0003528!1.01e-13!34;UBERON:0000153!2.31e-12!129;UBERON:0007811!2.31e-12!129;UBERON:0004121!4.81e-12!169;UBERON:0003056!1.19e-11!61;UBERON:0000924!1.40e-11!173;UBERON:0006601!1.40e-11!173;UBERON:0000033!5.00e-11!123;UBERON:0001896!6.21e-11!3;UBERON:0005290!6.21e-11!3;UBERON:0010096!6.21e-11!3;UBERON:0001869!1.21e-10!32;UBERON:0005174!2.31e-10!5;UBERON:0001137!2.31e-10!5;UBERON:0002298!5.26e-10!8;UBERON:0003076!1.85e-09!15;UBERON:0003057!1.85e-09!15;UBERON:0002619!7.66e-09!22;UBERON:0002308!1.16e-08!9;UBERON:0000125!1.16e-08!9;UBERON:0003127!6.92e-08!2;UBERON:0001950!1.07e-07!20;UBERON:0009663!1.12e-07!7;UBERON:0000956!1.23e-07!25;UBERON:0000203!1.23e-07!25;UBERON:0001873!1.41e-07!2;UBERON:0010122!1.41e-07!2;UBERON:0001894!1.50e-07!7;UBERON:0006222!1.50e-07!7;UBERON:0000341!1.66e-07!2;UBERON:0000025!2.29e-07!194;UBERON:0001897!3.86e-07!2;UBERON:0009568!3.86e-07!2;UBERON:0002216!3.86e-07!2;UBERON:0002209!3.86e-07!2;UBERON:0002213!3.86e-07!2;UBERON:0004267!3.86e-07!2;UBERON:0006444!3.86e-07!2;UBERON:0001995!3.86e-07!2;UBERON:0004715!3.86e-07!2;UBERON:0001468!3.86e-07!2;UBERON:0001130!3.86e-07!2;UBERON:0001066!3.86e-07!2;UBERON:0000062!4.25e-07!511;UBERON:0004111!7.97e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.23e-38;3!UBERON:0005290;1.23e-38;3!UBERON:0002298;6.48e-20;6!UBERON:0000305;4.36e-17;7!UBERON:0003127;1.33e-15;2!UBERON:0005631;2.81e-12;10!UBERON:0000158;2.81e-12;10!UBERON:0004733;1.76e-10;12!UBERON:0002028;1.76e-10;12!UBERON:0004732;9.51e-10;13!UBERON:0002046;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.23e-38,3;UBERON:0005290,1.23e-38,3;UBERON:0010096,1.23e-38,3;UBERON:0002298,6.48e-20,6;UBERON:0000305,4.36e-17,7;UBERON:0003127,1.33e-15,2;UBERON:0004871,4.37e-15,8;UBERON:0004733,1.77e-10,12;UBERON:0002028,1.77e-10,12;UBERON:0007277,1.77e-10,12;UBERON:0004732,9.51e-10,13;UBERON:0005631,4.75e-09,14;UBERON:0000158,4.75e-09,14;UBERON:0003076,1.42e-08,15;UBERON:0003057,1.42e-08,15;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
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| ||
|short_description=p@chr11:3026677..3026691,- | |short_description=p@chr11:3026677..3026691,- | ||
}} | }} |
Latest revision as of 21:25, 23 July 2015
Short description: | p@chr11:3026677..3026691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:3026677..3026691, - |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.81e-23 | 5 |
extraembryonic cell | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.23e-38 | 3 |
myelencephalon | 1.23e-38 | 3 |
future myelencephalon | 1.23e-38 | 3 |
brainstem | 6.48e-20 | 6 |
amnion | 4.36e-17 | 7 |
open tracheal system trachea | 1.33e-15 | 2 |
somatic layer of lateral plate mesoderm | 4.37e-15 | 8 |
segmental subdivision of hindbrain | 1.77e-10 | 12 |
hindbrain | 1.77e-10 | 12 |
presumptive hindbrain | 1.77e-10 | 12 |
segmental subdivision of nervous system | 9.51e-10 | 13 |
extraembryonic membrane | 4.75e-09 | 14 |
membranous layer | 4.75e-09 | 14 |
posterior neural tube | 1.42e-08 | 15 |
chordal neural plate | 1.42e-08 | 15 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |