FFCP PHASE1:Hg19::chr12:113346589..113346602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113346589..113346602,+ | |||
|description=CAGE_peak_at_chr12:113346589..113346602,+ | |description=CAGE_peak_at_chr12:113346589..113346602,+ | ||
|id=chr12:113346589..113346602,+ | |id=chr12:113346589..113346602,+ | ||
|ontology_enrichment_celltype=CL:0002194!3.96e-18!63;CL:0000576!3.96e-18!63;CL:0000040!3.96e-18!63;CL:0000559!3.96e-18!63;CL:0000860!4.45e-18!45;CL:0002057!2.72e-17!42;CL:0002009!3.50e-17!65;CL:0002087!9.34e-17!119;CL:0000839!4.56e-15!70;CL:0000557!1.11e-14!71;CL:0000766!9.94e-14!76;CL:0002031!2.61e-13!124;CL:0000738!2.78e-12!140;CL:0002032!4.58e-09!165;CL:0000837!4.58e-09!165;CL:0000037!5.73e-09!172;CL:0000566!5.73e-09!172;CL:0000988!4.74e-08!182;CL:0000763!8.76e-08!112;CL:0000049!8.76e-08!112 | |ontology_enrichment_celltype=CL:0002194!3.96e-18!63;CL:0000576!3.96e-18!63;CL:0000040!3.96e-18!63;CL:0000559!3.96e-18!63;CL:0000860!4.45e-18!45;CL:0002057!2.72e-17!42;CL:0002009!3.50e-17!65;CL:0002087!9.34e-17!119;CL:0000839!4.56e-15!70;CL:0000557!1.11e-14!71;CL:0000766!9.94e-14!76;CL:0002031!2.61e-13!124;CL:0000738!2.78e-12!140;CL:0002032!4.58e-09!165;CL:0000837!4.58e-09!165;CL:0000037!5.73e-09!172;CL:0000566!5.73e-09!172;CL:0000988!4.74e-08!182;CL:0000763!8.76e-08!112;CL:0000049!8.76e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-18;33!CL:0002057;3.90e-18;33!CL:0000473;5.69e-15;39!CL:0000234;5.69e-15;39!CL:0000576;1.16e-13;48!CL:0002379;6.73e-11;1!CL:0002595;2.73e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.35e-20,42;CL:0002057,4.35e-20,42;CL:0000473,2.15e-17,48;CL:0000234,2.15e-17,48;CL:0002194,1.28e-13,59;CL:0000576,1.28e-13,59;CL:0000040,1.28e-13,59;CL:0000559,1.28e-13,59;CL:0002009,3.92e-13,61;CL:0000839,4.84e-12,66;CL:0000557,7.65e-12,67;CL:0000766,6.27e-11,72;CL:0002379,6.73e-11,1;CL:0002595,2.73e-08,5;CL:0000763,8.00e-07,108;CL:0000049,8.00e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;6.73e-11;1!DOID:3565;6.73e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.73e-11,1;DOID:3565,6.73e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.86e-16!102;UBERON:0003061!5.86e-16!102;UBERON:0002193!7.94e-14!112;UBERON:0002371!1.79e-13!80;UBERON:0001474!1.55e-12!86;UBERON:0004765!3.57e-11!101;UBERON:0001434!3.57e-11!101;UBERON:0002405!1.20e-08!115;UBERON:0001737!6.80e-08!9 | |ontology_enrichment_uberon=UBERON:0002390!5.86e-16!102;UBERON:0003061!5.86e-16!102;UBERON:0002193!7.94e-14!112;UBERON:0002371!1.79e-13!80;UBERON:0001474!1.55e-12!86;UBERON:0004765!3.57e-11!101;UBERON:0001434!3.57e-11!101;UBERON:0002405!1.20e-08!115;UBERON:0001737!6.80e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.73e-08;5!UBERON:0001533;2.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-10,76;UBERON:0001474,1.97e-09,82;UBERON:0002390,2.33e-09,98;UBERON:0003061,2.33e-09,98;UBERON:0004765,1.80e-08,90;UBERON:0002193,2.42e-08,108;UBERON:0003834,2.73e-08,5;UBERON:0001533,2.73e-08,5;UBERON:0002405,3.76e-08,93;UBERON:0001434,1.75e-07,100 | |||
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| ||
|short_description=p@chr12:113346589..113346602,+ | |short_description=p@chr12:113346589..113346602,+ | ||
}} | }} |
Latest revision as of 05:08, 24 July 2015
Short description: | p@chr12:113346589..113346602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113346589..113346602, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.35e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.35e-20 | 42 |
defensive cell | 2.15e-17 | 48 |
phagocyte | 2.15e-17 | 48 |
monopoietic cell | 1.28e-13 | 59 |
monocyte | 1.28e-13 | 59 |
monoblast | 1.28e-13 | 59 |
promonocyte | 1.28e-13 | 59 |
macrophage dendritic cell progenitor | 3.92e-13 | 61 |
myeloid lineage restricted progenitor cell | 4.84e-12 | 66 |
granulocyte monocyte progenitor cell | 7.65e-12 | 67 |
myeloid leukocyte | 6.27e-11 | 72 |
meningothelial cell | 6.73e-11 | 1 |
smooth muscle cell of the subclavian artery | 2.73e-08 | 5 |
myeloid cell | 8.00e-07 | 108 |
common myeloid progenitor | 8.00e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.77e-10 | 76 |
bone element | 1.97e-09 | 82 |
hematopoietic system | 2.33e-09 | 98 |
blood island | 2.33e-09 | 98 |
skeletal element | 1.80e-08 | 90 |
hemolymphoid system | 2.42e-08 | 108 |
thoracic segment blood vessel | 2.73e-08 | 5 |
subclavian artery | 2.73e-08 | 5 |
immune system | 3.76e-08 | 93 |
skeletal system | 1.75e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.73e-11 | 1 |
meningioma | 6.73e-11 | 1 |