FFCP PHASE1:Hg19::chr16:30386115..30386129,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29895 | |EntrezGene=29895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29824 | |HGNC=29824 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A32 | |UniProt=Q96A32 | ||
|association_with_transcript=0bp_to_NM_013292,uc002dxv.1_5end | |association_with_transcript=0bp_to_NM_013292,uc002dxv.1_5end | ||
|cluster_id=chr16:30386115..30386129,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_MYLPF_5end | |description=CAGE_peak_1_at_MYLPF_5end | ||
|id=chr16:30386115..30386129,+ | |id=chr16:30386115..30386129,+ | ||
|ontology_enrichment_celltype=CL:0000188!2.29e-14!9;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:0000594!5.38e-07!3 | |ontology_enrichment_celltype=CL:0000188!2.29e-14!9;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:0000594!5.38e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;5.09e-21;9!CL:0000680;9.47e-15;7!CL:0000594;9.91e-10;3!CL:0000515;2.64e-09;3!CL:0002575;3.50e-07;2!CL:0000056;4.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.16e-21,9;CL:0000594,1.01e-09,3;CL:0000680,3.71e-09,58;CL:0000056,3.71e-09,58;CL:0000355,3.71e-09,58;CL:0002575,3.60e-07,2;CL:0000515,4.50e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;4.50e-07;4!UBERON:0006965;8.32e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!8.10e-12!63;UBERON:0001015!8.10e-12!63;UBERON:0000383!8.10e-12!63;UBERON:0001134!2.75e-11!61;UBERON:0002036!2.75e-11!61;UBERON:0003082!2.75e-11!61;UBERON:0004290!4.95e-09!70;UBERON:0007023!3.01e-08!115;UBERON:0000914!3.10e-08!83;UBERON:0002329!3.10e-08!83;UBERON:0003077!3.10e-08!83;UBERON:0003059!3.10e-08!83;UBERON:0007282!3.10e-08!83;UBERON:0009618!3.10e-08!83;UBERON:0007285!3.10e-08!83;UBERON:0000078!2.31e-07!18;UBERON:0000486!7.46e-07!82 | |ontology_enrichment_uberon=UBERON:0002385!8.10e-12!63;UBERON:0001015!8.10e-12!63;UBERON:0000383!8.10e-12!63;UBERON:0001134!2.75e-11!61;UBERON:0002036!2.75e-11!61;UBERON:0003082!2.75e-11!61;UBERON:0004290!4.95e-09!70;UBERON:0007023!3.01e-08!115;UBERON:0000914!3.10e-08!83;UBERON:0002329!3.10e-08!83;UBERON:0003077!3.10e-08!83;UBERON:0003059!3.10e-08!83;UBERON:0007282!3.10e-08!83;UBERON:0009618!3.10e-08!83;UBERON:0007285!3.10e-08!83;UBERON:0000078!2.31e-07!18;UBERON:0000486!7.46e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.23e-40;16!UBERON:0002036;1.23e-40;16!UBERON:0002385;2.40e-21;31!UBERON:0001015;2.40e-21;31!UBERON:0000383;2.40e-21;31!UBERON:0005090;9.17e-08;2!UBERON:0001630;9.17e-08;2!UBERON:0000341;1.38e-07;2!UBERON:0002204;2.03e-07;70!UBERON:0003127;3.71e-07;2!UBERON:0001829;5.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.24e-14,62;UBERON:0002036,2.24e-14,62;UBERON:0003082,2.24e-14,62;UBERON:0002385,9.16e-14,64;UBERON:0001015,9.16e-14,64;UBERON:0000383,9.16e-14,64;UBERON:0002329,6.65e-12,71;UBERON:0003059,6.65e-12,71;UBERON:0007282,6.65e-12,71;UBERON:0004290,6.65e-12,71;UBERON:0009618,6.65e-12,71;UBERON:0003077,1.14e-11,72;UBERON:0007285,1.14e-11,72;UBERON:0007524,1.94e-11,73;UBERON:0007503,2.18e-10,78;UBERON:0005256,8.90e-10,122;UBERON:0000486,1.82e-09,83;UBERON:0000490,1.92e-08,148;UBERON:0005090,9.17e-08,2;UBERON:0001630,9.17e-08,2;UBERON:0000341,1.38e-07,2;UBERON:0003104,2.19e-07,160;UBERON:0009142,2.19e-07,160;UBERON:0001042,2.49e-07,10;UBERON:0009145,2.49e-07,10;UBERON:0003127,3.72e-07,2;UBERON:0001829,5.49e-07,2;UBERON:0003408,5.65e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65939452896706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,4.8796222750066,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,605.675890908433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.1482086936746,5.95881335396112,6.26713371339634,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,10.5035809422532,0.813795071099207,0,0,0,0,0,0,1.03473071292505,0,0,0,9.20265440074881,2859.41415061586,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,1.27463817604702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0,0,0.0915694648183434,0.082509499920588,0,0,0,190.731327190357,57.9222800351063,151.968637978868,239.559962978114,5.04875150880886,104.992086393901,234.117545512029,3723.49779481785,0,0,0,0,0,0,0,0,0,0,0,0,15.2584931437464,1.89827654831236,0,0,0,0,0,3.23770423649967,0,0.117812402345686,0,0,0,17.0671808681357,0,0,0,0,0,0,0,0,0,0,0,4.957175969596,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,211.411302689343,0,0,0,0,0,0,0,0,0,0,0,3.78571177677032,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8683.0875661256,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,29.179353596419,0,0,0,0,65.8555421956368,0,205.868454851065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7826660269455,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76552321627865,36.9804815576285,49.829428409406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.0634158101939068,0,9.3203820365721,2587.74129530017,0,0,0,0,0,0,0,0,0,0,1.05236437700559,0,0,1.49136876415977,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,21.906142310125,0,0,0,0,27.964778323318,0,0,0,0,0,0,0,0,0,6353.21917932481,4740.14711816664,15602.9835447928,1241.96300925222,0,0,0,0,0,0,0,1.09279780251979,0,0.490296643507811,0,0,0,47.7600972169242,0,0,0.128915775947154,0,0,0.352894871715692,0,0,159.63779062478,0,0,0,0,0,1.48798007266701,0,8.21990468035199,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0,0,1702.88657946123,2741.7880571679,1.48554492622814,4.65560357218934,0,9.54707374172474,246.987204906944,2660.06322580507,8575.68205859497,73.8852021570025,13.1968857922524,679.625108423505,0,0,0,0,168.941478530487,0.611207220914332,1.62758471326295,0,112.713324410975,0 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| ||
|short_description=p1@MYLPF | |short_description=p1@MYLPF | ||
}} | }} |
Latest revision as of 07:25, 16 September 2015
Short description: | p1@MYLPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYLPF_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_NM_013292, uc002dxv.1_5end |
EntrezGene: | MYLPF |
HGNC: | 29824 |
UniProt: | Q96A32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.16e-21 | 9 |
skeletal muscle satellite cell | 1.01e-09 | 3 |
muscle precursor cell | 3.71e-09 | 58 |
myoblast | 3.71e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.71e-09 | 58 |
central nervous system pericyte | 3.60e-07 | 2 |
skeletal muscle myoblast | 4.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.24e-14 | 62 |
striated muscle tissue | 2.24e-14 | 62 |
myotome | 2.24e-14 | 62 |
muscle tissue | 9.16e-14 | 64 |
musculature | 9.16e-14 | 64 |
musculature of body | 9.16e-14 | 64 |
somite | 6.65e-12 | 71 |
presomitic mesoderm | 6.65e-12 | 71 |
presumptive segmental plate | 6.65e-12 | 71 |
dermomyotome | 6.65e-12 | 71 |
trunk paraxial mesoderm | 6.65e-12 | 71 |
paraxial mesoderm | 1.14e-11 | 72 |
presumptive paraxial mesoderm | 1.14e-11 | 72 |
dense mesenchyme tissue | 1.94e-11 | 73 |
epithelial vesicle | 2.18e-10 | 78 |
trunk mesenchyme | 8.90e-10 | 122 |
multilaminar epithelium | 1.82e-09 | 83 |
unilaminar epithelium | 1.92e-08 | 148 |
muscle structure | 9.17e-08 | 2 |
muscle organ | 9.17e-08 | 2 |
throat | 1.38e-07 | 2 |
mesenchyme | 2.19e-07 | 160 |
entire embryonic mesenchyme | 2.19e-07 | 160 |
chordate pharynx | 2.49e-07 | 10 |
pharyngeal region of foregut | 2.49e-07 | 10 |
open tracheal system trachea | 3.72e-07 | 2 |
major salivary gland | 5.49e-07 | 2 |
gland of gut | 5.65e-07 | 10 |