FFCP PHASE1:Hg19::chr17:76408829..76408836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76408829..76408836,+ | |||
|coexpression_cluster_id=C3259 | |||
|description=CAGE_peak_at_chr17:76408829..76408836,+ | |description=CAGE_peak_at_chr17:76408829..76408836,+ | ||
|id=chr17:76408829..76408836,+ | |id=chr17:76408829..76408836,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.86e-81!42;CL:0000860!1.09e-75!45;CL:0000766!1.15e-66!76;CL:0002194!1.24e-60!63;CL:0000576!1.24e-60!63;CL:0000040!1.24e-60!63;CL:0000559!1.24e-60!63;CL:0002009!1.24e-58!65;CL:0000839!3.97e-54!70;CL:0000557!2.66e-53!71;CL:0000763!1.32e-43!112;CL:0000049!1.32e-43!112;CL:0000738!1.84e-41!140;CL:0002087!1.51e-37!119;CL:0000037!1.07e-32!172;CL:0000566!1.07e-32!172;CL:0002031!9.11e-31!124;CL:0000988!1.39e-30!182;CL:0002032!6.61e-30!165;CL:0000837!6.61e-30!165;CL:0000767!7.56e-18!3;CL:0000134!1.38e-12!358;CL:0002320!3.16e-12!365;CL:0000094!6.56e-12!8;CL:0000219!5.92e-11!390;CL:0000048!1.99e-09!430;CL:0000723!3.28e-09!436;CL:0000034!6.26e-09!444;CL:0000081!1.09e-08!11;CL:0000842!2.75e-08!3 | |ontology_enrichment_celltype=CL:0002057!1.86e-81!42;CL:0000860!1.09e-75!45;CL:0000766!1.15e-66!76;CL:0002194!1.24e-60!63;CL:0000576!1.24e-60!63;CL:0000040!1.24e-60!63;CL:0000559!1.24e-60!63;CL:0002009!1.24e-58!65;CL:0000839!3.97e-54!70;CL:0000557!2.66e-53!71;CL:0000763!1.32e-43!112;CL:0000049!1.32e-43!112;CL:0000738!1.84e-41!140;CL:0002087!1.51e-37!119;CL:0000037!1.07e-32!172;CL:0000566!1.07e-32!172;CL:0002031!9.11e-31!124;CL:0000988!1.39e-30!182;CL:0002032!6.61e-30!165;CL:0000837!6.61e-30!165;CL:0000767!7.56e-18!3;CL:0000134!1.38e-12!358;CL:0002320!3.16e-12!365;CL:0000094!6.56e-12!8;CL:0000219!5.92e-11!390;CL:0000048!1.99e-09!430;CL:0000723!3.28e-09!436;CL:0000034!6.26e-09!444;CL:0000081!1.09e-08!11;CL:0000842!2.75e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.47e-32;33!CL:0002057;9.47e-32;33!CL:0000576;1.72e-29;48!CL:0000473;1.94e-23;39!CL:0000234;1.94e-23;39!CL:0000766;2.64e-15;69!CL:0002393;5.10e-13;6!CL:0002397;5.10e-13;6!CL:0000771;1.64e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.88e-42,42;CL:0002057,4.88e-42,42;CL:0000473,9.79e-37,48;CL:0000234,9.79e-37,48;CL:0002194,2.64e-29,59;CL:0000576,2.64e-29,59;CL:0000040,2.64e-29,59;CL:0000559,2.64e-29,59;CL:0000766,3.58e-29,72;CL:0002009,2.41e-28,61;CL:0000839,3.40e-26,66;CL:0000557,8.40e-26,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002087,6.76e-15,115;CL:0002031,2.96e-14,120;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000771,1.57e-10,2;CL:0002393,5.20e-09,9;CL:0002397,5.20e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.57e-33;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.79e-47!80;UBERON:0001474!3.48e-43!86;UBERON:0002390!1.46e-41!102;UBERON:0003061!1.46e-41!102;UBERON:0002193!2.19e-37!112;UBERON:0004765!4.87e-36!101;UBERON:0001434!4.87e-36!101;UBERON:0002405!4.93e-31!115;UBERON:0002204!9.84e-20!167;UBERON:0003081!9.85e-17!216;UBERON:0002384!9.81e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!8.79e-47!80;UBERON:0001474!3.48e-43!86;UBERON:0002390!1.46e-41!102;UBERON:0003061!1.46e-41!102;UBERON:0002193!2.19e-37!112;UBERON:0004765!4.87e-36!101;UBERON:0001434!4.87e-36!101;UBERON:0002405!4.93e-31!115;UBERON:0002204!9.84e-20!167;UBERON:0003081!9.85e-17!216;UBERON:0002384!9.81e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.95e-23,76;UBERON:0001474,4.77e-21,82;UBERON:0004765,3.77e-19,90;UBERON:0002405,1.61e-18,93;UBERON:0002390,1.48e-17,98;UBERON:0003061,1.48e-17,98;UBERON:0001434,3.38e-17,100;UBERON:0002193,6.83e-16,108;UBERON:0002204,4.47e-10,167;UBERON:0003081,3.65e-08,203 | |||
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|short_description=p@chr17:76408829..76408836,+ | |short_description=p@chr17:76408829..76408836,+ | ||
}} | }} |
Latest revision as of 22:01, 25 July 2015
Short description: | p@chr17:76408829..76408836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76408829..76408836, + |
Coexpression cluster: | C3259_Eosinophils_CD14_Basophils_anaplastic_optic_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.88e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-42 | 42 |
defensive cell | 9.79e-37 | 48 |
phagocyte | 9.79e-37 | 48 |
monopoietic cell | 2.64e-29 | 59 |
monocyte | 2.64e-29 | 59 |
monoblast | 2.64e-29 | 59 |
promonocyte | 2.64e-29 | 59 |
myeloid leukocyte | 3.58e-29 | 72 |
macrophage dendritic cell progenitor | 2.41e-28 | 61 |
myeloid lineage restricted progenitor cell | 3.40e-26 | 66 |
granulocyte monocyte progenitor cell | 8.40e-26 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 6.76e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.96e-14 | 120 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
eosinophil | 1.57e-10 | 2 |
intermediate monocyte | 5.20e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.20e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.95e-23 | 76 |
bone element | 4.77e-21 | 82 |
skeletal element | 3.77e-19 | 90 |
immune system | 1.61e-18 | 93 |
hematopoietic system | 1.48e-17 | 98 |
blood island | 1.48e-17 | 98 |
skeletal system | 3.38e-17 | 100 |
hemolymphoid system | 6.83e-16 | 108 |
musculoskeletal system | 4.47e-10 | 167 |
lateral plate mesoderm | 3.65e-08 | 203 |