FFCP PHASE1:Hg19::chr17:49187745..49187750,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:49187745..49187750,-
|short_description=p@chr17:49187745..49187750,-
|description=CAGE_peak_at_chr17:49187745..49187750,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:49187745..49187750,- | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr17:49187745..49187750,- | |||
|id=chr17:49187745..49187750,- | |||
|ontology_enrichment_celltype=CL:0002057!8.01e-23!42;CL:0000860!2.31e-21!45;CL:0000738!4.98e-19!140;CL:0000766!1.86e-16!76;CL:0002087!4.24e-15!119;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0002031!1.55e-14!124;CL:0002009!1.17e-13!65;CL:0000557!1.67e-13!71;CL:0002032!2.23e-13!165;CL:0000837!2.23e-13!165;CL:0000988!3.94e-13!182;CL:0002194!8.06e-13!63;CL:0000576!8.06e-13!63;CL:0000040!8.06e-13!63;CL:0000559!8.06e-13!63;CL:0000839!1.16e-12!70;CL:0000763!4.99e-11!112;CL:0000049!4.99e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-28;33!CL:0002057;3.16e-28;33!CL:0000473;1.49e-19;39!CL:0000234;1.49e-19;39!CL:0000576;4.65e-17;48!CL:0000766;5.45e-13;69!CL:0002087;2.50e-09;104!CL:0000738;3.74e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.24e-34,42;CL:0002057,3.24e-34,42;CL:0000738,3.24e-29,136;CL:0000473,6.03e-29,48;CL:0000234,6.03e-29,48;CL:0000766,9.61e-26,72;CL:0002087,1.86e-24,115;CL:0002031,6.62e-24,120;CL:0002009,2.92e-22,61;CL:0000557,3.92e-22,67;CL:0002194,7.01e-21,59;CL:0000576,7.01e-21,59;CL:0000040,7.01e-21,59;CL:0000559,7.01e-21,59;CL:0000839,3.26e-20,66;CL:0000037,1.49e-19,168;CL:0002032,4.53e-18,161;CL:0000837,4.53e-18,161;CL:0000988,8.94e-18,177;CL:0000763,6.04e-14,108;CL:0000049,6.04e-14,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.33e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.75e-15!102;UBERON:0003061!4.75e-15!102;UBERON:0002193!3.09e-12!112;UBERON:0002371!1.36e-11!80;UBERON:0001474!1.88e-11!86;UBERON:0007023!1.55e-09!115;UBERON:0004765!1.93e-08!101;UBERON:0001434!1.93e-08!101;UBERON:0002405!1.77e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.49e-20,98;UBERON:0003061,1.49e-20,98;UBERON:0002371,1.63e-18,76;UBERON:0001474,2.28e-17,82;UBERON:0002193,9.40e-17,108;UBERON:0004765,6.39e-15,90;UBERON:0002405,3.71e-14,93;UBERON:0001434,2.17e-12,100 | |||
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| ||
|short_description=p@chr17:49187745..49187750,- | |||
}} | }} |
Latest revision as of 18:53, 25 July 2015
Short description: | p@chr17:49187745..49187750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:49187745..49187750, - |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.24e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-34 | 42 |
leukocyte | 3.24e-29 | 136 |
defensive cell | 6.03e-29 | 48 |
phagocyte | 6.03e-29 | 48 |
myeloid leukocyte | 9.61e-26 | 72 |
nongranular leukocyte | 1.86e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 6.62e-24 | 120 |
macrophage dendritic cell progenitor | 2.92e-22 | 61 |
granulocyte monocyte progenitor cell | 3.92e-22 | 67 |
monopoietic cell | 7.01e-21 | 59 |
monocyte | 7.01e-21 | 59 |
monoblast | 7.01e-21 | 59 |
promonocyte | 7.01e-21 | 59 |
myeloid lineage restricted progenitor cell | 3.26e-20 | 66 |
hematopoietic stem cell | 1.49e-19 | 168 |
hematopoietic oligopotent progenitor cell | 4.53e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-18 | 161 |
hematopoietic cell | 8.94e-18 | 177 |
myeloid cell | 6.04e-14 | 108 |
common myeloid progenitor | 6.04e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.49e-20 | 98 |
blood island | 1.49e-20 | 98 |
bone marrow | 1.63e-18 | 76 |
bone element | 2.28e-17 | 82 |
hemolymphoid system | 9.40e-17 | 108 |
skeletal element | 6.39e-15 | 90 |
immune system | 3.71e-14 | 93 |
skeletal system | 2.17e-12 | 100 |