FFCP PHASE1:Hg19::chr17:7082560..7082572,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7082560..7082572,-
|short_description=p4@ASGR1
|description=CAGE_peak_4_at_ASGR1_5end
|association_with_transcript=310bp_to_ENST00000269299,NM_001197216,N...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=432 | |EntrezGene=432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |HGNC=742 | ||
|TSSclassifier=strong | |||
|UniProt=P07306,F8W7M3,Q6FGQ5 | |UniProt=P07306,F8W7M3,Q6FGQ5 | ||
|association_with_transcript=310bp_to_ENST00000269299,NM_001197216,NM_001671,uc002ges.3_5end | |||
|cluster_id=chr17:7082560..7082572,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_4_at_ASGR1_5end | |||
|id=chr17:7082560..7082572,- | |||
|ontology_enrichment_celltype=CL:0000181!8.33e-29!12;CL:0000417!8.33e-29!12;CL:0000668!8.33e-29!12;CL:0000414!8.33e-29!12;CL:0000412!8.33e-29!12;CL:0000182!8.33e-29!12;CL:0002322!9.88e-22!5;CL:0000223!2.06e-10!59;CL:0002563!6.04e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-67;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.71e-67,12;CL:0000223,8.59e-18,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.17e-54;11!UBERON:0009497;6.72e-46;13!UBERON:0001041;6.98e-20;30!UBERON:0003104;2.71e-19;31!CL:0000223;4.18e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.62e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.25e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.17e-29!19;UBERON:0006925!2.17e-29!19;UBERON:0008836!2.17e-29!19;UBERON:0008835!3.43e-25!22;UBERON:0003894!3.43e-25!22;UBERON:0009854!4.92e-24!23;UBERON:0007499!5.36e-22!25;UBERON:0009497!5.36e-22!25;UBERON:0000015!5.36e-22!25;UBERON:0002423!5.36e-22!25;UBERON:0006235!5.36e-22!25;UBERON:0004161!5.36e-22!25;UBERON:0005057!4.27e-21!26;UBERON:0009856!4.27e-21!26;UBERON:0003929!9.13e-20!54;UBERON:0002365!1.84e-17!31;UBERON:0002330!1.84e-17!31;UBERON:0002368!2.67e-15!35;UBERON:0002530!1.17e-12!59;UBERON:0004921!2.86e-12!129;UBERON:0004185!2.86e-12!129;UBERON:0005911!3.62e-12!82;UBERON:0000949!1.41e-11!45;UBERON:0005172!2.65e-11!55;UBERON:0005173!2.65e-11!55;UBERON:0002417!5.05e-10!61;UBERON:0000916!5.05e-10!61;UBERON:0001007!1.14e-09!155;UBERON:0001555!1.14e-09!155;UBERON:0007026!1.14e-09!155;UBERON:0004119!1.34e-08!169;UBERON:0000925!1.34e-08!169;UBERON:0006595!1.34e-08!169;UBERON:0000160!2.49e-08!27;UBERON:0001242!6.04e-08!4;UBERON:0001262!6.04e-08!4;UBERON:0004786!6.04e-08!4;UBERON:0004808!6.04e-08!4;UBERON:0001277!6.04e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.65e-70;19!UBERON:0006925;8.65e-70;19!UBERON:0002423;5.90e-53;25!UBERON:0002365;2.77e-41;31!UBERON:0002330;2.77e-41;31!UBERON:0002368;3.11e-36;33!UBERON:0000949;6.76e-26;43!UBERON:0005172;9.14e-16;52!UBERON:0005173;9.14e-16;52!UBERON:0002417;1.19e-14;58!UBERON:0000916;1.19e-14;58!UBERON:0002530;7.26e-13;57!UBERON:0001007;4.64e-11;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.65e-70,19;UBERON:0006925,8.65e-70,19;UBERON:0008836,8.65e-70,19;UBERON:0008835,3.16e-60,22;UBERON:0003894,3.16e-60,22;UBERON:0009854,1.36e-57,23;UBERON:0007499,5.90e-53,25;UBERON:0009497,5.90e-53,25;UBERON:0000015,5.90e-53,25;UBERON:0002423,5.90e-53,25;UBERON:0006235,5.90e-53,25;UBERON:0004161,5.90e-53,25;UBERON:0009856,6.65e-51,26;UBERON:0002365,1.26e-42,31;UBERON:0002330,1.26e-42,31;UBERON:0002368,1.05e-37,35;UBERON:0003929,6.95e-30,54;UBERON:0000949,3.23e-29,45;UBERON:0005172,2.94e-24,54;UBERON:0005173,2.94e-24,54;UBERON:0002530,3.73e-22,59;UBERON:0002417,8.93e-22,60;UBERON:0000916,8.93e-22,60;UBERON:0005911,1.87e-19,82;UBERON:0001041,8.02e-15,87;UBERON:0004921,3.62e-13,118;UBERON:0005177,1.13e-12,101;UBERON:0009569,2.35e-11,112;UBERON:0003914,7.71e-11,117;UBERON:0001007,1.41e-10,145;UBERON:0001555,1.41e-10,145;UBERON:0007026,1.41e-10,145;UBERON:0000490,2.01e-10,148;UBERON:0005256,2.30e-10,122;UBERON:0004119,1.65e-09,160;UBERON:0000925,1.65e-09,160;UBERON:0006595,1.65e-09,160;UBERON:0001048,1.03e-07,160;UBERON:0003104,1.03e-07,160;UBERON:0009142,1.03e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,6.87979051674338,8.86184860022106,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31967596219631,23.241038780631,23.3236879218701,22.4453801034436,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8620893471233,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,6.87979051674338,8.86184860022106,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31967596219631,23.241038780631,23.3236879218701,22.4453801034436,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8620893471233,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ASGR1 | |||
}} | }} |
Latest revision as of 04:21, 17 September 2015
Short description: | p4@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASGR1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 310bp_to_ENST00000269299, NM_001197216, NM_001671, uc002ges.3_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | P07306F8W7M3Q6FGQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.71e-67 | 12 |
endodermal cell | 8.59e-18 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.25e-07 | 39 |