FFCP PHASE1:Hg19::chr17:73075143..73075146,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:73075143..73075146,+
|short_description=p@chr17:73075143..73075146,+
|description=CAGE_peak_at_chr17:73075143..73075146,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73075143..73075146,+ | |||
|description=CAGE_peak_at_chr17:73075143..73075146,+ | |||
|id=chr17:73075143..73075146,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.83e-13!254;CL:0002620!4.40e-12!23;CL:0002559!5.38e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.93e-19;3!CL:0000346;9.07e-19;3!CL:1000428;9.07e-19;3!CL:0002586;1.62e-18;3!CL:0000313;4.72e-15;1!CL:0000149;3.85e-14;4!CL:0002559;1.18e-11;5!CL:0002149;7.25e-10;6!CL:0002255;7.25e-10;6!CL:0000159;3.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.63e-19,3;CL:0000346,7.94e-19,3;CL:1000428,7.94e-19,3;CL:0002586,1.48e-18,3;CL:0000313,4.73e-15,1;CL:0000149,3.61e-14,4;CL:0002559,1.09e-11,5;CL:0002149,6.21e-10,6;CL:0002255,6.21e-10,6;CL:0000159,3.56e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.74e-11!106;DOID:299!5.51e-10!25;DOID:0050687!2.54e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.12e-27;2!DOID:299;7.35e-19;25!DOID:2152;4.72e-15;1!DOID:120;2.44e-12;27!DOID:193;1.74e-11;29!DOID:3001;7.25e-10;6!DOID:4929;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.10e-27,2;DOID:299,8.75e-19,25;DOID:2152,4.73e-15,1;DOID:120,2.53e-12,27;DOID:193,1.80e-11,29;DOID:3001,6.21e-10,6;DOID:4929,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.64e-12!9;UBERON:0002097!7.26e-10!40;UBERON:0002199!3.75e-09!45;UBERON:0002416!3.75e-09!45;UBERON:0002073!5.38e-08!4;UBERON:0005086!5.38e-08!4;UBERON:0003102!8.95e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.93e-19;3!UBERON:0000920;7.93e-19;3!UBERON:0000412;9.07e-19;3!UBERON:0001992;9.07e-19;3!UBERON:0001781;1.62e-18;3!UBERON:0001782;1.62e-18;3!UBERON:0004911;4.72e-15;1!UBERON:0004913;1.61e-14;1!UBERON:0003703;1.61e-14;1!UBERON:0001174;1.61e-14;1!UBERON:0004914;1.61e-14;1!UBERON:0002073;1.18e-11;5!UBERON:0000966;1.66e-11;5!UBERON:0005388;1.66e-11;5!UBERON:0001802;1.66e-11;5!UBERON:0004909;3.56e-08;2!UBERON:0002067;7.31e-07;9!UBERON:0010371;9.11e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.63e-19,3;UBERON:0000412,7.94e-19,3;UBERON:0001992,7.94e-19,3;UBERON:0001782,1.48e-18,3;UBERON:0005424,1.48e-18,3;UBERON:0004911,4.73e-15,1;UBERON:0004913,2.75e-14,1;UBERON:0003703,2.75e-14,1;UBERON:0001174,2.75e-14,1;UBERON:0004914,2.75e-14,1;UBERON:0001781,3.61e-14,4;UBERON:0002073,1.09e-11,5;UBERON:0005086,1.09e-11,5;UBERON:0000966,9.26e-10,6;UBERON:0005388,9.26e-10,6;UBERON:0001802,9.26e-10,6;UBERON:0003124,1.22e-08,7;UBERON:0004909,3.56e-08,2;UBERON:0005085,4.03e-07,31;UBERON:0004923,5.72e-07,66;UBERON:0002067,7.00e-07,9;UBERON:0004016,7.00e-07,9;UBERON:0010083,7.00e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.747243402759005,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0.930584281657949,0.675105328965065,0.0974370051611986,0.252433774244115,0.460249493211497,0,0.355009592516614,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.630809660135739,0.468565659970853,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,1.64007322849853,1.30151357865721,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0,0,0,1.47698645169619,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0,0,0,0,0.941798755221676,0,1.70765727617876,0,0,0.489961987071888,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0.271808412147228,0.523014231561666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.367182116944987,0,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0.684347351537318,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,1.23520578864389,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.737318726261158,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,1.41832609060762,0.333694205676207,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0.93061915699296,0,4.92163899910286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.747243402759005,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0.930584281657949,0.675105328965065,0.0974370051611986,0.252433774244115,0.460249493211497,0,0.355009592516614,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.630809660135739,0.468565659970853,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,1.64007322849853,1.30151357865721,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0,0,0,1.47698645169619,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0,0,0,0,0.941798755221676,0,1.70765727617876,0,0,0.489961987071888,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0.271808412147228,0.523014231561666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.367182116944987,0,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0.684347351537318,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,1.23520578864389,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.737318726261158,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,1.41832609060762,0.333694205676207,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0.93061915699296,0,4.92163899910286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr17:73075143..73075146,+ | |||
}} | }} |
Latest revision as of 21:00, 25 July 2015
Short description: | p@chr17:73075143..73075146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73075143..73075146, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.63e-19 | 3 |
hair follicle dermal papilla cell | 7.94e-19 | 3 |
stem cell of epidermis | 7.94e-19 | 3 |
retinal pigment epithelial cell | 1.48e-18 | 3 |
serous secreting cell | 4.73e-15 | 1 |
visual pigment cell | 3.61e-14 | 4 |
hair follicle cell | 1.09e-11 | 5 |
epithelial cell of uterus | 6.21e-10 | 6 |
stromal cell of endometrium | 6.21e-10 | 6 |
seromucus secreting cell | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.63e-19 | 3 |
dermal papilla | 7.94e-19 | 3 |
papillary layer of dermis | 7.94e-19 | 3 |
pigmented layer of retina | 1.48e-18 | 3 |
presumptive retinal pigmented epithelium | 1.48e-18 | 3 |
epithelium of female gonad | 4.73e-15 | 1 |
hepatopancreatic ampulla | 2.75e-14 | 1 |
extrahepatic bile duct | 2.75e-14 | 1 |
common bile duct | 2.75e-14 | 1 |
duodenal papilla | 2.75e-14 | 1 |
layer of retina | 3.61e-14 | 4 |
hair follicle | 1.09e-11 | 5 |
hair follicle placode | 1.09e-11 | 5 |
retina | 9.26e-10 | 6 |
photoreceptor array | 9.26e-10 | 6 |
posterior segment of eyeball | 9.26e-10 | 6 |
chorion | 1.22e-08 | 7 |
epithelium of gonad | 3.56e-08 | 2 |
ectodermal placode | 4.03e-07 | 31 |
organ component layer | 5.72e-07 | 66 |
dermis | 7.00e-07 | 9 |
dermatome | 7.00e-07 | 9 |
future dermis | 7.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.10e-27 | 2 |
adenocarcinoma | 8.75e-19 | 25 |
ovary epithelial cancer | 4.73e-15 | 1 |
female reproductive organ cancer | 2.53e-12 | 27 |
reproductive organ cancer | 1.80e-11 | 29 |
female reproductive endometrioid cancer | 6.21e-10 | 6 |
tubular adenocarcinoma | 8.60e-08 | 2 |