FFCP PHASE1:Hg19::chr10:125821523..125821528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125821523..125821528,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:125821523..125821528,- | |description=CAGE_peak_at_chr10:125821523..125821528,- | ||
|id=chr10:125821523..125821528,- | |id=chr10:125821523..125821528,- | ||
|ontology_enrichment_celltype=CL:0002057!4.29e-32!42;CL:0000860!1.25e-30!45;CL:0000766!1.91e-27!76;CL:0002194!2.58e-27!63;CL:0000576!2.58e-27!63;CL:0000040!2.58e-27!63;CL:0000559!2.58e-27!63;CL:0002009!5.14e-26!65;CL:0000839!4.19e-23!70;CL:0000557!1.42e-22!71;CL:0002087!1.41e-15!119;CL:0000738!6.09e-15!140;CL:0002031!1.23e-13!124;CL:0000763!1.42e-13!112;CL:0000049!1.42e-13!112;CL:0002032!1.14e-09!165;CL:0000837!1.14e-09!165;CL:0000037!4.10e-09!172;CL:0000566!4.10e-09!172;CL:0000988!2.93e-08!182;CL:0002393!5.96e-08!9;CL:0002397!5.96e-08!9 | |ontology_enrichment_celltype=CL:0002057!4.29e-32!42;CL:0000860!1.25e-30!45;CL:0000766!1.91e-27!76;CL:0002194!2.58e-27!63;CL:0000576!2.58e-27!63;CL:0000040!2.58e-27!63;CL:0000559!2.58e-27!63;CL:0002009!5.14e-26!65;CL:0000839!4.19e-23!70;CL:0000557!1.42e-22!71;CL:0002087!1.41e-15!119;CL:0000738!6.09e-15!140;CL:0002031!1.23e-13!124;CL:0000763!1.42e-13!112;CL:0000049!1.42e-13!112;CL:0002032!1.14e-09!165;CL:0000837!1.14e-09!165;CL:0000037!4.10e-09!172;CL:0000566!4.10e-09!172;CL:0000988!2.93e-08!182;CL:0002393!5.96e-08!9;CL:0002397!5.96e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-43;33!CL:0002057;2.50e-43;33!CL:0000473;3.79e-37;39!CL:0000234;3.79e-37;39!CL:0000576;9.53e-21;48!CL:0000771;2.77e-18;2!CL:0000766;5.10e-16;69!CL:0000763;2.12e-10;100!CL:0000094;2.49e-10;8!CL:0000081;1.22e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.58e-42,42;CL:0002057,7.58e-42,42;CL:0000473,2.00e-41,48;CL:0000234,2.00e-41,48;CL:0000766,3.98e-38,72;CL:0002194,1.33e-32,59;CL:0000576,1.33e-32,59;CL:0000040,1.33e-32,59;CL:0000559,1.33e-32,59;CL:0002009,1.83e-31,61;CL:0000839,6.51e-29,66;CL:0000557,1.90e-28,67;CL:0000763,1.69e-24,108;CL:0000049,1.69e-24,108;CL:0000738,7.75e-19,136;CL:0000771,2.24e-18,2;CL:0002087,1.58e-15,115;CL:0002032,1.99e-15,161;CL:0000837,1.99e-15,161;CL:0002031,9.04e-15,120;CL:0000037,1.18e-14,168;CL:0000988,9.54e-14,177;CL:0000094,2.27e-10,8;CL:0000081,1.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-29;42!CL:0000049;2.54e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.50e-23!112;UBERON:0002390!2.91e-23!102;UBERON:0003061!2.91e-23!102;UBERON:0002371!1.66e-20!80;UBERON:0002405!3.69e-20!115;UBERON:0001474!4.75e-18!86;UBERON:0004765!8.94e-16!101;UBERON:0001434!8.94e-16!101;UBERON:0002020!9.38e-07!34;UBERON:0003528!9.38e-07!34 | |ontology_enrichment_uberon=UBERON:0002193!2.50e-23!112;UBERON:0002390!2.91e-23!102;UBERON:0003061!2.91e-23!102;UBERON:0002371!1.66e-20!80;UBERON:0002405!3.69e-20!115;UBERON:0001474!4.75e-18!86;UBERON:0004765!8.94e-16!101;UBERON:0001434!8.94e-16!101;UBERON:0002020!9.38e-07!34;UBERON:0003528!9.38e-07!34 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.39e-25,76;UBERON:0002390,4.81e-24,98;UBERON:0003061,4.81e-24,98;UBERON:0001474,8.24e-23,82;UBERON:0002193,1.48e-21,108;UBERON:0004765,1.46e-20,90;UBERON:0002405,8.12e-20,93;UBERON:0001434,2.99e-18,100;UBERON:0003081,4.65e-10,203;UBERON:0002204,7.60e-10,167 | |||
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| ||
|short_description=p@chr10:125821523..125821528,- | |short_description=p@chr10:125821523..125821528,- | ||
}} | }} |
Latest revision as of 11:18, 23 July 2015
Short description: | p@chr10:125821523..125821528, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125821523..125821528, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.58e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.58e-42 | 42 |
defensive cell | 2.00e-41 | 48 |
phagocyte | 2.00e-41 | 48 |
myeloid leukocyte | 3.98e-38 | 72 |
monopoietic cell | 1.33e-32 | 59 |
monocyte | 1.33e-32 | 59 |
monoblast | 1.33e-32 | 59 |
promonocyte | 1.33e-32 | 59 |
macrophage dendritic cell progenitor | 1.83e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.51e-29 | 66 |
granulocyte monocyte progenitor cell | 1.90e-28 | 67 |
myeloid cell | 1.69e-24 | 108 |
common myeloid progenitor | 1.69e-24 | 108 |
leukocyte | 7.75e-19 | 136 |
eosinophil | 2.24e-18 | 2 |
nongranular leukocyte | 1.58e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.99e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 9.04e-15 | 120 |
hematopoietic stem cell | 1.18e-14 | 168 |
hematopoietic cell | 9.54e-14 | 177 |
granulocyte | 2.27e-10 | 8 |
blood cell | 1.14e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.39e-25 | 76 |
hematopoietic system | 4.81e-24 | 98 |
blood island | 4.81e-24 | 98 |
bone element | 8.24e-23 | 82 |
hemolymphoid system | 1.48e-21 | 108 |
skeletal element | 1.46e-20 | 90 |
immune system | 8.12e-20 | 93 |
skeletal system | 2.99e-18 | 100 |
lateral plate mesoderm | 4.65e-10 | 203 |
musculoskeletal system | 7.60e-10 | 167 |