FFCP PHASE1:Hg19::chr10:43428400..43428412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:43428400..43428412,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_at_chr10:43428400..43428412,+ | |description=CAGE_peak_at_chr10:43428400..43428412,+ | ||
|id=chr10:43428400..43428412,+ | |id=chr10:43428400..43428412,+ | ||
|ontology_enrichment_celltype=CL:0000784!1.17e-31!3;CL:0000875!4.73e-14!3;CL:0002396!4.73e-14!3;CL:0000167!2.96e-11!1;CL:0000164!2.96e-11!1;CL:0000502!2.96e-11!1;CL:0000172!2.96e-11!1;CL:0000173!2.96e-11!1;CL:0002351!2.96e-11!1;CL:0000451!4.66e-09!10;CL:0000738!2.22e-08!140;CL:0000624!1.52e-07!6 | |ontology_enrichment_celltype=CL:0000784!1.17e-31!3;CL:0000875!4.73e-14!3;CL:0002396!4.73e-14!3;CL:0000167!2.96e-11!1;CL:0000164!2.96e-11!1;CL:0000502!2.96e-11!1;CL:0000172!2.96e-11!1;CL:0000173!2.96e-11!1;CL:0002351!2.96e-11!1;CL:0000451!4.66e-09!10;CL:0000738!2.22e-08!140;CL:0000624!1.52e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.27e-147;3!CL:0000451;4.07e-41;10!CL:0000840;1.32e-09;5!CL:0000990;7.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.27e-147,3;CL:0000451,4.07e-41,10;CL:0000840,1.32e-09,5;CL:0001029,1.32e-09,5;CL:0000990,7.91e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!2.96e-11!1 | |ontology_enrichment_disease=DOID:4430!2.96e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.33e-11!4;UBERON:0005058!6.33e-11!4;UBERON:0009113!6.33e-11!4;UBERON:0003295!6.33e-11!4;UBERON:0005562!6.33e-11!4;UBERON:0003351!1.43e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!6.33e-11!4;UBERON:0005058!6.33e-11!4;UBERON:0009113!6.33e-11!4;UBERON:0003295!6.33e-11!4;UBERON:0005562!6.33e-11!4;UBERON:0003351!1.43e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.18e-26;2!UBERON:0005058;9.18e-26;2!UBERON:0009113;9.18e-26;2!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0003351,1.57e-09,6;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7 | |||
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|short_description=p@chr10:43428400..43428412,+ | |short_description=p@chr10:43428400..43428412,+ | ||
}} | }} |
Latest revision as of 13:42, 23 July 2015
Short description: | p@chr10:43428400..43428412, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:43428400..43428412, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.27e-147 | 3 |
dendritic cell | 4.07e-41 | 10 |
immature conventional dendritic cell | 1.32e-09 | 5 |
common dendritic progenitor | 1.32e-09 | 5 |
conventional dendritic cell | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
pharyngeal epithelium | 1.57e-09 | 6 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |