FFCP PHASE1:Hg19::chr17:76732851..76732873,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76732851..76732873,-
|short_description=p4@CYTH1
|description=CAGE_peak_4_at_CYTH1_5end
|association_with_transcript=98bp_to_ENST00000416418_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9267 | |EntrezGene=9267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9501 | |HGNC=9501 | ||
|TSSclassifier=strong | |||
|UniProt=C9JG04 | |UniProt=C9JG04 | ||
|association_with_transcript=98bp_to_ENST00000416418_5end | |||
|cluster_id=chr17:76732851..76732873,- | |||
|coexpression_cluster_id=C2440 | |||
|description=CAGE_peak_4_at_CYTH1_5end | |||
|id=chr17:76732851..76732873,- | |||
|ontology_enrichment_celltype=CL:0000738!1.73e-34!140;CL:0002087!3.64e-27!119;CL:0002031!8.53e-27!124;CL:0000037!4.76e-25!172;CL:0000566!4.76e-25!172;CL:0002032!4.79e-24!165;CL:0000837!4.79e-24!165;CL:0000988!2.93e-23!182;CL:0002057!1.78e-19!42;CL:0000860!6.57e-18!45;CL:0000766!2.02e-17!76;CL:0000557!5.90e-15!71;CL:0002009!1.68e-14!65;CL:0002194!2.19e-13!63;CL:0000576!2.19e-13!63;CL:0000040!2.19e-13!63;CL:0000559!2.19e-13!63;CL:0000839!4.07e-13!70;CL:0000542!9.76e-13!53;CL:0000051!9.76e-13!53;CL:0000838!1.15e-12!52;CL:0000763!7.41e-12!112;CL:0000049!7.41e-12!112;CL:0000945!2.02e-09!24;CL:0000826!2.02e-09!24;CL:0000236!6.23e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.85e-19;33!CL:0002057;3.85e-19;33!CL:0000473;2.00e-14;39!CL:0000234;2.00e-14;39!CL:0000576;2.30e-10;48!CL:0002087;1.34e-09;104!CL:0000766;3.27e-09;69!CL:0000945;4.57e-09;24!CL:0000738;2.98e-08;136!CL:0000542;2.73e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.54e-36,136;CL:0002087,4.81e-29,115;CL:0002031,5.79e-28,120;CL:0000037,1.78e-25,168;CL:0002032,1.29e-24,161;CL:0000837,1.29e-24,161;CL:0000988,2.26e-23,177;CL:0000860,1.83e-21,42;CL:0002057,1.83e-21,42;CL:0000473,1.59e-19,48;CL:0000234,1.59e-19,48;CL:0000766,3.82e-19,72;CL:0000557,2.25e-16,67;CL:0002009,3.74e-16,61;CL:0002194,6.91e-15,59;CL:0000576,6.91e-15,59;CL:0000040,6.91e-15,59;CL:0000559,6.91e-15,59;CL:0000839,6.32e-14,66;CL:0000542,6.36e-13,53;CL:0000051,6.36e-13,53;CL:0000838,7.77e-13,52;CL:0000763,3.65e-12,108;CL:0000049,3.65e-12,108;CL:0000945,4.78e-09,24;CL:0000826,4.78e-09,24;CL:0000236,4.22e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-16;42!CL:0000051;2.73e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.26e-17!112;UBERON:0002390!7.38e-17!102;UBERON:0003061!7.38e-17!102;UBERON:0007023!4.16e-13!115;UBERON:0002371!9.78e-12!80;UBERON:0001474!6.39e-09!86;UBERON:0002405!1.45e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-18,98;UBERON:0003061,2.39e-18,98;UBERON:0002193,4.59e-18,108;UBERON:0002405,8.53e-14,93;UBERON:0002371,8.17e-13,76;UBERON:0001474,2.89e-10,82;UBERON:0007023,3.19e-10,114;UBERON:0004765,1.24e-09,90 | |||
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|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,4.66894479352867,2.09340350391728,2.40285509343189,2.90143676051299,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,10.7742902104611,11.6582837018923,10.0749800081509,20.8483066729919,9.21190555433311,4.79929982279836,7.35536979583142,7.8313538882345,5.54631015250181,0.542270404062111,4.97592313705975,1.17440175733939,9.97191735357379,10.0272223735071,8.24641308720237,0.223915474239924,0.647787332037959,0,6.83371722263954,6.04601509902095,5.33684934613196,16.967319694115,17.2690512969167,16.1047312865454,17.5492359316512,18.6997315766243,20.5739540003069,18.961012440514,27.1103567105207,14.8969135253776,14.6829024843232,13.0994952027766,17.9778787556068,24.7927952820431,32.4138317346855,30.688182038354,10.8850929061616,9.97318288108159,20.4587880255693,22.0559021357724,25.5323351111013,20.553134216854,16.5824119069451,14.6015217157656,22.1532621599219,22.3997815974346,44.9298715904829,45.8870461789282,3.16882929467913,2.33864729961548,1.67726916406701,2.2465726229299,2.4028302854641,3.85741408072992,3.13514018115373,1.39241674039363,1.46131323011707,7.03984977845291,9.83049500271837,7.11607403090844,14.9355577898278,10.0098996759003,15.518315878771,13.8819423284821,8.58648379081828,15.9379631350646,21.1405388173538,16.4377488093848,2.64342657158052,10.6496626966492,1.05353633910031,11.6058764367162,9.03924754323079,7.81285696198135,4.68122187093899,3.91106719960308,3.78758244587787,1.94826728407911,4.67923918917729,4.12448270464772,4.87374568083967,2.43723477388514,4.35510487067296,4.03183977435623,3.78207180588455,3.03985019564433,7.82468331484642,15.5700891320163,11.7717964359474,17.7710390468461,7.0251792472491,7.2811893784365,4.46715679127419,9.36172860472161,4.14135038621326,3.90650072313851,1.90090408889675,10.0885329782108,8.06315650272836,8.74515085866421,5.6826540490564,1.64225599384209,6.24980903996671,3.20928234940209,4.05508330871837,0,0,0,0,0,0,2.3858578411533,0.486634870302636,0,0,0.087834785693126,3.53643503843824,1.82147644146271,2.22470665670658,3.57002133020152,4.35324343248168,4.12169677608482,2.8618874916641,2.85997455390064,1.48583000531826,3.9752481473341,0.860234595106124,5.9013885273291,3.95715559346807,2.09749718104953,0.825354125820202,4.38889429727302,6.71883573840255,4.98072767761394,5.02080919147005,0,0,0.24406205754817,3.67663080345869,6.48113558305408,3.66128885964727,1.79623498100936,2.92789849256638,1.53316637465883,1.89853131913626,1.09921046358244,25.038279312852,19.3890132074163,4.36094052142534,0.496971951695318,1.39293562831038,1.85372853138506,1.72101972449288,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,5.21804303540901,14.1827982707234,5.44928731239107,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.220587945464788,1.30727666455444,0.949082476444386,1.48314438976181,2.15843611637881,0.38474715694639,0,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,4.79654910318143,0,7.02401826615204,6.74410519545717,1.40740561376283,2.87024179991442,0,0,0,0,0,1.87676382089396,0.462985512576611,0.951270761172991,1.58040879591855,0.858486162094873,1.47730203652438,2.80805118167085,1.0404181360211,6.56136837907439,21.1657481530563,13.3268591407843,5.1943943167652,4.06887513919547,3.06706143332169,2.46331618947972,0.352193736052904,5.1832028885193,4.17947864909188,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,3.31583314765545,3.48613383440118,1.49959486773086,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0.224170287987055,5.91092280605782,4.9594342217689,4.74869234235069,0,0,0,0,0,16.478154526838,5.9832291840805,11.603634376209,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,6.82334486205528,7.76571122947021,6.29692591040322,2.12189300012382,3.32870879020994,1.20956117331872,0.744323423456331,0.153461973288062,0,0,0,0,0,0.462629081407967,0,0.328508624055237,0,0.116210378459959,2.05461064305758,5.21316822788541,2.85451065701279,0,0,0,1.35359883872224,1.30926073077505,0.784349769176855,0,2.32213583564327,0,1.53084334748864,1.29549549661284,0,0.270946437543853,0.501689773854853,1.27438136522519,2.49322802678617,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,2.67906630284078,0,0,9.18824860793876,6.50060246036521,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0,9.58652509093673,8.64855303142978,28.5852475987868,2.93357564481095,0,0,0,0,1.06461206063404,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0.92947049429925,0,0.430234056612155,0.392996164052485,0.35667105148125,0,0.211107635297664,0.329294892959902,0,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| ||
|short_description=p4@CYTH1 | |||
}} | }} |
Latest revision as of 22:42, 17 September 2015
Short description: | p4@CYTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYTH1_5end |
Coexpression cluster: | C2440_CD14_lymphoma_migratory_CD19_b_splenic_immature |
Association with transcript: | 98bp_to_ENST00000416418_5end |
EntrezGene: | CYTH1 |
HGNC: | 9501 |
UniProt: | C9JG04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.54e-36 | 136 |
nongranular leukocyte | 4.81e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 5.79e-28 | 120 |
hematopoietic stem cell | 1.78e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.29e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-24 | 161 |
hematopoietic cell | 2.26e-23 | 177 |
classical monocyte | 1.83e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-21 | 42 |
defensive cell | 1.59e-19 | 48 |
phagocyte | 1.59e-19 | 48 |
myeloid leukocyte | 3.82e-19 | 72 |
granulocyte monocyte progenitor cell | 2.25e-16 | 67 |
macrophage dendritic cell progenitor | 3.74e-16 | 61 |
monopoietic cell | 6.91e-15 | 59 |
monocyte | 6.91e-15 | 59 |
monoblast | 6.91e-15 | 59 |
promonocyte | 6.91e-15 | 59 |
myeloid lineage restricted progenitor cell | 6.32e-14 | 66 |
lymphocyte | 6.36e-13 | 53 |
common lymphoid progenitor | 6.36e-13 | 53 |
lymphoid lineage restricted progenitor cell | 7.77e-13 | 52 |
myeloid cell | 3.65e-12 | 108 |
common myeloid progenitor | 3.65e-12 | 108 |
lymphocyte of B lineage | 4.78e-09 | 24 |
pro-B cell | 4.78e-09 | 24 |
B cell | 4.22e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-18 | 98 |
blood island | 2.39e-18 | 98 |
hemolymphoid system | 4.59e-18 | 108 |
immune system | 8.53e-14 | 93 |
bone marrow | 8.17e-13 | 76 |
bone element | 2.89e-10 | 82 |
adult organism | 3.19e-10 | 114 |
skeletal element | 1.24e-09 | 90 |