FFCP PHASE1:Hg19::chr10:6442902..6442932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6442902..6442932,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:6442902..6442932,- | |description=CAGE_peak_at_chr10:6442902..6442932,- | ||
|id=chr10:6442902..6442932,- | |id=chr10:6442902..6442932,- | ||
|ontology_enrichment_celltype=CL:0002057!2.64e-90!42;CL:0000860!8.49e-84!45;CL:0000766!4.89e-72!76;CL:0002194!4.51e-69!63;CL:0000576!4.51e-69!63;CL:0000040!4.51e-69!63;CL:0000559!4.51e-69!63;CL:0002009!9.63e-67!65;CL:0000839!1.71e-61!70;CL:0000557!1.57e-60!71;CL:0000738!8.07e-50!140;CL:0000763!4.01e-49!112;CL:0000049!4.01e-49!112;CL:0002087!1.86e-45!119;CL:0000037!5.83e-39!172;CL:0000566!5.83e-39!172;CL:0002031!3.55e-38!124;CL:0002032!1.59e-36!165;CL:0000837!1.59e-36!165;CL:0000988!2.41e-36!182;CL:0002393!7.37e-23!9;CL:0002397!7.37e-23!9;CL:0000134!4.37e-15!358;CL:0002320!1.28e-14!365;CL:0000767!3.59e-14!3;CL:0000219!5.59e-13!390;CL:0000048!5.17e-11!430;CL:0000723!9.85e-11!436;CL:0000034!2.26e-10!444;CL:0000094!3.38e-09!8;CL:0000842!5.64e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.64e-90!42;CL:0000860!8.49e-84!45;CL:0000766!4.89e-72!76;CL:0002194!4.51e-69!63;CL:0000576!4.51e-69!63;CL:0000040!4.51e-69!63;CL:0000559!4.51e-69!63;CL:0002009!9.63e-67!65;CL:0000839!1.71e-61!70;CL:0000557!1.57e-60!71;CL:0000738!8.07e-50!140;CL:0000763!4.01e-49!112;CL:0000049!4.01e-49!112;CL:0002087!1.86e-45!119;CL:0000037!5.83e-39!172;CL:0000566!5.83e-39!172;CL:0002031!3.55e-38!124;CL:0002032!1.59e-36!165;CL:0000837!1.59e-36!165;CL:0000988!2.41e-36!182;CL:0002393!7.37e-23!9;CL:0002397!7.37e-23!9;CL:0000134!4.37e-15!358;CL:0002320!1.28e-14!365;CL:0000767!3.59e-14!3;CL:0000219!5.59e-13!390;CL:0000048!5.17e-11!430;CL:0000723!9.85e-11!436;CL:0000034!2.26e-10!444;CL:0000094!3.38e-09!8;CL:0000842!5.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.62e-26;6!CL:0002397;6.62e-26;6!CL:0000767;8.98e-23;3!CL:0000094;4.78e-19;8!CL:0000081;4.83e-14;11!CL:0000766;3.88e-11;69!CL:0000576;4.64e-11;48!CL:0000771;1.57e-09;2!CL:0000860;2.03e-07;33!CL:0002057;2.03e-07;33!CL:0000226;7.08e-07;3!CL:0000842;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,8.04e-23,3;CL:0000766,7.05e-22,72;CL:0000094,4.49e-19,8;CL:0000860,5.13e-19,42;CL:0002057,5.13e-19,42;CL:0002393,1.62e-17,9;CL:0002397,1.62e-17,9;CL:0000473,1.34e-16,48;CL:0000234,1.34e-16,48;CL:0000763,2.08e-14,108;CL:0000049,2.08e-14,108;CL:0000081,4.62e-14,11;CL:0000738,8.70e-14,136;CL:0002194,3.29e-13,59;CL:0000576,3.29e-13,59;CL:0000040,3.29e-13,59;CL:0000559,3.29e-13,59;CL:0002009,9.02e-13,61;CL:0000839,8.65e-12,66;CL:0000557,1.31e-11,67;CL:0000037,5.26e-11,168;CL:0000988,2.11e-10,177;CL:0000771,1.57e-09,2;CL:0002032,2.03e-09,161;CL:0000837,2.03e-09,161;CL:0002087,1.30e-08,115;CL:0000226,7.28e-07,3;CL:0000842,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.14e-53!80;UBERON:0001474!9.51e-49!86;UBERON:0002390!1.14e-45!102;UBERON:0003061!1.14e-45!102;UBERON:0002193!6.54e-41!112;UBERON:0004765!1.98e-40!101;UBERON:0001434!1.98e-40!101;UBERON:0002405!1.32e-34!115;UBERON:0002204!3.93e-23!167;UBERON:0003081!5.34e-20!216;UBERON:0002384!5.51e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!6.14e-53!80;UBERON:0001474!9.51e-49!86;UBERON:0002390!1.14e-45!102;UBERON:0003061!1.14e-45!102;UBERON:0002193!6.54e-41!112;UBERON:0004765!1.98e-40!101;UBERON:0001434!1.98e-40!101;UBERON:0002405!1.32e-34!115;UBERON:0002204!3.93e-23!167;UBERON:0003081!5.34e-20!216;UBERON:0002384!5.51e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-10,76;UBERON:0002390,3.36e-10,98;UBERON:0003061,3.36e-10,98;UBERON:0001474,1.95e-09,82;UBERON:0002193,3.30e-09,108;UBERON:0004765,1.44e-08,90;UBERON:0002405,2.81e-08,93;UBERON:0001434,1.13e-07,100 | |||
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|short_description=p@chr10:6442902..6442932,- | |short_description=p@chr10:6442902..6442932,- | ||
}} | }} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:6442902..6442932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6442902..6442932, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 8.04e-23 | 3 |
myeloid leukocyte | 7.05e-22 | 72 |
granulocyte | 4.49e-19 | 8 |
classical monocyte | 5.13e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.13e-19 | 42 |
intermediate monocyte | 1.62e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.62e-17 | 9 |
defensive cell | 1.34e-16 | 48 |
phagocyte | 1.34e-16 | 48 |
myeloid cell | 2.08e-14 | 108 |
common myeloid progenitor | 2.08e-14 | 108 |
blood cell | 4.62e-14 | 11 |
leukocyte | 8.70e-14 | 136 |
monopoietic cell | 3.29e-13 | 59 |
monocyte | 3.29e-13 | 59 |
monoblast | 3.29e-13 | 59 |
promonocyte | 3.29e-13 | 59 |
macrophage dendritic cell progenitor | 9.02e-13 | 61 |
myeloid lineage restricted progenitor cell | 8.65e-12 | 66 |
granulocyte monocyte progenitor cell | 1.31e-11 | 67 |
hematopoietic stem cell | 5.26e-11 | 168 |
hematopoietic cell | 2.11e-10 | 177 |
eosinophil | 1.57e-09 | 2 |
hematopoietic oligopotent progenitor cell | 2.03e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-09 | 161 |
nongranular leukocyte | 1.30e-08 | 115 |
single nucleate cell | 7.28e-07 | 3 |
mononuclear cell | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-10 | 76 |
hematopoietic system | 3.36e-10 | 98 |
blood island | 3.36e-10 | 98 |
bone element | 1.95e-09 | 82 |
hemolymphoid system | 3.30e-09 | 108 |
skeletal element | 1.44e-08 | 90 |
immune system | 2.81e-08 | 93 |
skeletal system | 1.13e-07 | 100 |