FFCP PHASE1:Hg19::chr11:35334939..35334950,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35334939..35334950,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr11:35334939..35334950,- | |description=CAGE_peak_at_chr11:35334939..35334950,- | ||
|id=chr11:35334939..35334950,- | |id=chr11:35334939..35334950,- | ||
|ontology_enrichment_celltype=CL:0002057!2.62e-116!42;CL:0000860!3.76e-108!45;CL:0002194!3.10e-74!63;CL:0000576!3.10e-74!63;CL:0000040!3.10e-74!63;CL:0000559!3.10e-74!63;CL:0002009!8.46e-72!65;CL:0000766!3.82e-69!76;CL:0000839!2.61e-66!70;CL:0000557!2.65e-65!71;CL:0002087!4.29e-48!119;CL:0000738!3.26e-45!140;CL:0000763!4.30e-45!112;CL:0000049!4.30e-45!112;CL:0002031!3.79e-40!124;CL:0000037!1.26e-35!172;CL:0000566!1.26e-35!172;CL:0000988!2.57e-33!182;CL:0002032!8.69e-33!165;CL:0000837!8.69e-33!165;CL:0002393!3.66e-15!9;CL:0002397!3.66e-15!9;CL:0000134!1.21e-13!358;CL:0002320!3.00e-13!365;CL:0000219!7.37e-12!390;CL:0000048!3.42e-10!430;CL:0000723!5.91e-10!436;CL:0000034!1.20e-09!444;CL:0000842!3.19e-08!3;CL:0000767!1.02e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.62e-116!42;CL:0000860!3.76e-108!45;CL:0002194!3.10e-74!63;CL:0000576!3.10e-74!63;CL:0000040!3.10e-74!63;CL:0000559!3.10e-74!63;CL:0002009!8.46e-72!65;CL:0000766!3.82e-69!76;CL:0000839!2.61e-66!70;CL:0000557!2.65e-65!71;CL:0002087!4.29e-48!119;CL:0000738!3.26e-45!140;CL:0000763!4.30e-45!112;CL:0000049!4.30e-45!112;CL:0002031!3.79e-40!124;CL:0000037!1.26e-35!172;CL:0000566!1.26e-35!172;CL:0000988!2.57e-33!182;CL:0002032!8.69e-33!165;CL:0000837!8.69e-33!165;CL:0002393!3.66e-15!9;CL:0002397!3.66e-15!9;CL:0000134!1.21e-13!358;CL:0002320!3.00e-13!365;CL:0000219!7.37e-12!390;CL:0000048!3.42e-10!430;CL:0000723!5.91e-10!436;CL:0000034!1.20e-09!444;CL:0000842!3.19e-08!3;CL:0000767!1.02e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-54;33!CL:0002057;2.52e-54;33!CL:0000473;8.56e-39;39!CL:0000234;8.56e-39;39!CL:0000576;2.26e-37;48!CL:0000766;1.53e-22;69!CL:0002393;6.40e-17;6!CL:0002397;6.40e-17;6!CL:0002087;2.88e-16;104!CL:0000226;1.15e-14;3!CL:0000842;1.15e-14;3!CL:0000763;5.34e-11;100!CL:0000738;4.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-69,42;CL:0002057,1.02e-69,42;CL:0000473,9.49e-61,48;CL:0000234,9.49e-61,48;CL:0002194,3.49e-48,59;CL:0000576,3.49e-48,59;CL:0000040,3.49e-48,59;CL:0000559,3.49e-48,59;CL:0002009,1.46e-46,61;CL:0000839,6.27e-43,66;CL:0000557,2.89e-42,67;CL:0000766,3.18e-39,72;CL:0002087,3.08e-30,115;CL:0000763,1.53e-25,108;CL:0000049,1.53e-25,108;CL:0000738,2.99e-25,136;CL:0002031,8.79e-23,120;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0000226,9.97e-15,3;CL:0000842,9.97e-15,3;CL:0002393,1.77e-11,9;CL:0002397,1.77e-11,9;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-51;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.31e-57!80;UBERON:0002390!1.26e-53!102;UBERON:0003061!1.26e-53!102;UBERON:0001474!5.59e-53!86;UBERON:0002193!2.60e-48!112;UBERON:0004765!2.83e-44!101;UBERON:0001434!2.83e-44!101;UBERON:0002405!6.91e-41!115;UBERON:0002204!2.07e-24!167;UBERON:0003081!5.11e-22!216;UBERON:0002384!1.04e-12!375;UBERON:0000926!3.90e-07!448;UBERON:0004120!3.90e-07!448;UBERON:0006603!3.90e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!2.31e-57!80;UBERON:0002390!1.26e-53!102;UBERON:0003061!1.26e-53!102;UBERON:0001474!5.59e-53!86;UBERON:0002193!2.60e-48!112;UBERON:0004765!2.83e-44!101;UBERON:0001434!2.83e-44!101;UBERON:0002405!6.91e-41!115;UBERON:0002204!2.07e-24!167;UBERON:0003081!5.11e-22!216;UBERON:0002384!1.04e-12!375;UBERON:0000926!3.90e-07!448;UBERON:0004120!3.90e-07!448;UBERON:0006603!3.90e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.48e-37,76;UBERON:0002390,8.11e-36,98;UBERON:0003061,8.11e-36,98;UBERON:0001474,3.08e-34,82;UBERON:0002193,2.52e-32,108;UBERON:0004765,4.92e-31,90;UBERON:0002405,5.66e-30,93;UBERON:0001434,9.65e-28,100;UBERON:0003081,3.56e-16,203;UBERON:0002204,9.36e-16,167;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0002384,1.05e-07,371 | |||
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|short_description=p@chr11:35334939..35334950,- | |short_description=p@chr11:35334939..35334950,- | ||
}} | }} |
Latest revision as of 21:57, 23 July 2015
Short description: | p@chr11:35334939..35334950, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35334939..35334950, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.02e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-69 | 42 |
defensive cell | 9.49e-61 | 48 |
phagocyte | 9.49e-61 | 48 |
monopoietic cell | 3.49e-48 | 59 |
monocyte | 3.49e-48 | 59 |
monoblast | 3.49e-48 | 59 |
promonocyte | 3.49e-48 | 59 |
macrophage dendritic cell progenitor | 1.46e-46 | 61 |
myeloid lineage restricted progenitor cell | 6.27e-43 | 66 |
granulocyte monocyte progenitor cell | 2.89e-42 | 67 |
myeloid leukocyte | 3.18e-39 | 72 |
nongranular leukocyte | 3.08e-30 | 115 |
myeloid cell | 1.53e-25 | 108 |
common myeloid progenitor | 1.53e-25 | 108 |
leukocyte | 2.99e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 8.79e-23 | 120 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-16 | 161 |
single nucleate cell | 9.97e-15 | 3 |
mononuclear cell | 9.97e-15 | 3 |
intermediate monocyte | 1.77e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.77e-11 | 9 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.48e-37 | 76 |
hematopoietic system | 8.11e-36 | 98 |
blood island | 8.11e-36 | 98 |
bone element | 3.08e-34 | 82 |
hemolymphoid system | 2.52e-32 | 108 |
skeletal element | 4.92e-31 | 90 |
immune system | 5.66e-30 | 93 |
skeletal system | 9.65e-28 | 100 |
lateral plate mesoderm | 3.56e-16 | 203 |
musculoskeletal system | 9.36e-16 | 167 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
connective tissue | 1.05e-07 | 371 |