FFCP PHASE1:Hg19::chr12:124873905..124873916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124873905..124873916,- | |||
|coexpression_cluster_id=C2195 | |coexpression_cluster_id=C2195 | ||
|description=CAGE_peak_at_chr12:124873905..124873916,- | |description=CAGE_peak_at_chr12:124873905..124873916,- | ||
|id=chr12:124873905..124873916,- | |id=chr12:124873905..124873916,- | ||
|ontology_enrichment_celltype=CL:0002057!4.76e-17!42;CL:0000766!1.12e-15!76;CL:0002009!1.57e-14!65;CL:0000860!2.06e-14!45;CL:0002194!8.85e-14!63;CL:0000576!8.85e-14!63;CL:0000040!8.85e-14!63;CL:0000559!8.85e-14!63;CL:0000557!1.28e-12!71;CL:0000839!2.15e-11!70 | |ontology_enrichment_celltype=CL:0002057!4.76e-17!42;CL:0000766!1.12e-15!76;CL:0002009!1.57e-14!65;CL:0000860!2.06e-14!45;CL:0002194!8.85e-14!63;CL:0000576!8.85e-14!63;CL:0000040!8.85e-14!63;CL:0000559!8.85e-14!63;CL:0000557!1.28e-12!71;CL:0000839!2.15e-11!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-27;33!CL:0002057;2.44e-27;33!CL:0000473;6.08e-21;39!CL:0000234;6.08e-21;39!CL:0000576;5.28e-15;48!CL:0000766;1.03e-10;69!CL:0000094;1.27e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-27,42;CL:0002057,1.51e-27,42;CL:0000473,5.66e-26,48;CL:0000234,5.66e-26,48;CL:0000766,1.17e-25,72;CL:0002009,2.36e-23,61;CL:0002194,6.23e-23,59;CL:0000576,6.23e-23,59;CL:0000040,6.23e-23,59;CL:0000559,6.23e-23,59;CL:0000557,4.46e-20,67;CL:0000839,3.86e-19,66;CL:0000763,3.44e-13,108;CL:0000049,3.44e-13,108;CL:0000738,1.63e-09,136;CL:0000094,1.53e-07,8;CL:0002087,2.17e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.75e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.96e-14!216;UBERON:0000467!2.53e-10!625;UBERON:0000480!3.97e-10!626;UBERON:0002371!6.17e-10!80;UBERON:0000926!9.64e-10!448;UBERON:0004120!9.64e-10!448;UBERON:0006603!9.64e-10!448;UBERON:0001474!1.87e-09!86;UBERON:0000062!2.95e-09!511;UBERON:0000468!4.95e-09!659;UBERON:0000025!2.94e-08!194;UBERON:0000923!3.66e-08!604;UBERON:0005291!3.66e-08!604;UBERON:0006598!3.66e-08!604;UBERON:0002532!3.66e-08!604;UBERON:0004765!3.92e-08!101;UBERON:0001434!3.92e-08!101;UBERON:0002050!5.43e-08!605;UBERON:0005423!5.43e-08!605;UBERON:0000922!1.50e-07!612;UBERON:0003914!1.74e-07!118;UBERON:0002204!2.73e-07!167 | |ontology_enrichment_uberon=UBERON:0003081!6.96e-14!216;UBERON:0000467!2.53e-10!625;UBERON:0000480!3.97e-10!626;UBERON:0002371!6.17e-10!80;UBERON:0000926!9.64e-10!448;UBERON:0004120!9.64e-10!448;UBERON:0006603!9.64e-10!448;UBERON:0001474!1.87e-09!86;UBERON:0000062!2.95e-09!511;UBERON:0000468!4.95e-09!659;UBERON:0000025!2.94e-08!194;UBERON:0000923!3.66e-08!604;UBERON:0005291!3.66e-08!604;UBERON:0006598!3.66e-08!604;UBERON:0002532!3.66e-08!604;UBERON:0004765!3.92e-08!101;UBERON:0001434!3.92e-08!101;UBERON:0002050!5.43e-08!605;UBERON:0005423!5.43e-08!605;UBERON:0000922!1.50e-07!612;UBERON:0003914!1.74e-07!118;UBERON:0002204!2.73e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.73e-19,203;UBERON:0002371,2.12e-17,76;UBERON:0001474,2.36e-16,82;UBERON:0004765,9.58e-14,90;UBERON:0002405,9.16e-13,93;UBERON:0001434,1.74e-12,100;UBERON:0002390,2.40e-12,98;UBERON:0003061,2.40e-12,98;UBERON:0002193,8.82e-11,108;UBERON:0002204,5.26e-10,167;UBERON:0000926,1.77e-09,315;UBERON:0004120,1.77e-09,315;UBERON:0006603,1.77e-09,315;UBERON:0001637,6.02e-07,42;UBERON:0003509,6.02e-07,42;UBERON:0004572,6.02e-07,42 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.281908808191942,2.00146596706261,0,0,0,0,0,1.22866968250754,2.79120467188971,1.74753097704138,2.37390280405608,0.123766352960047,0,0.672325146451775,0,0,0,0.861847406537515,0.408001382488506,1.56727360739044,0,0.547497700291537,1.12988375635323,0,0,0,0.393364276848904,1.15148819429164,2.63187409637329,0.919421224478927,3.614471025339,0.369754010166788,0,0,0,1.66198622559563,3.20871115952227,1.30206522429511,0.447830948479849,0.32389366601898,0,7.4153101777578,6.04601509902095,7.76268995801012,2.55671940596253,4.52284676824008,3.40677007984614,1.43846196161075,4.35473201099471,2.12834006899727,2.41321976515633,1.29096936716765,2.70852973188684,7.71793592124679,3.82068610080984,2.69668181334102,7.34601341690166,3.53021929783703,3.19668562899521,5.60747210317417,4.9865914405408,5.96714650745772,1.45104619314292,1.13477044938228,0.622822248995575,2.00998932205395,2.08593167368081,1.52032191293582,0,2.57794345191295,1.26584954976354,0.633765858935825,1.06302149982522,0.209658645508376,1.01095768031846,1.05123824989054,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.472674085820339,0.221729397462564,2.19586964232815,0.392937226493138,0.364295288292542,0,2.92092654289215,4.70150290708022,5.31831842075461,0.238490624305342,1.14398982156026,0.74291500265913,1.19257444420023,0.860234595106124,4.16568601929113,1.13061588384802,0.419499436209906,0.550236083880135,2.50793959844173,0,0,0,0,0,0,1.83831540172934,6.48113558305408,0.357198913136319,0.898117490504679,0.788280363383256,1.53316637465883,0,1.28241220751285,6.58902087180316,7.75560528296651,0.436094052142534,0.496971951695318,0.633152558322899,1.05927344650575,0.573673241497627,0,0,3.20246987189115,2.4666754841716,0.311211035399766,0.942974704487816,0.490385709340376,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0.747243402759005,0.117434498643765,0.323745888736263,0.702254033511242,0.61246251376468,0.859840221182376,0.309977343527296,1.18800285728205,0,1.82032272387605,0.718618141816238,0.168336113954066,1.12606667884768,0.277064115484183,0,0.612975591598039,0.901428353439581,0.567160915800105,1.79389635688862,0.85422955527427,0.211931901159562,2.10063767259082,0.515262646192195,0.257640540045629,0.18611685633159,1.85653965465393,1.07180705677318,0.504867548488229,0.276149695926898,0.161646056818812,2.13005755509969,0.906768884048762,0.67824236924195,0.966304265816484,0.272746120590835,0.573609190778008,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0.354920400119532,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0.784885860501384,1.15424147083917,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,0,0,0.514703430895577,0.329250856225877,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,1.71697232418975,0.246217006087397,0.468008530278475,1.33768046059855,0,0,0.425325291727159,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.37872730027914,0.063497894292169,0,1.17217447210047,0,0.411309970813294,0.901029173531752,0,0.336393253036082,0,0.5867062865676,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0,1.62786481617433,0.823240336780769,0,0,0,0.904318131178758,0,1.29964888536674,0,0.502257091432126,4.21667878966063,0.479249710983165,0,1.42636905040718,1.01346914667305,0.821905290201534,0.537182889719687,0,0.394061520403854,0,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,1.24324654030811,0.36807447515742,0,0,1.24782516918484,0.535286966391485,0.473107245101804,0.585707074963566,0,0,0,1.99267679560631,1.29058417979192,0.260650843404249,0.195801157462741,0,2.06768026122887,2.15714200818617,0.853820462427555,1.5156378572313,1.66435439510497,1.20956117331872,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.616838775210622,0.177561725313127,0.410635780069046,1.55776328755086,0.581051892299796,0,0,0,0.229628896329213,0,0,1.80479845162965,0.847168708148562,1.56869953835371,0,0.73886140225013,1.13733384070897,1.36074964221213,1.51141141271498,1.54227252690289,0.270946437543853,0,0.764628819135115,0,2.68649705666614,0,0,2.3080511260475,0.656029291399411,0.976135183992909,0.9273691048295,0.824125183365091,0.577566499444116,1.72279661398852,1.30012049207304,1.6068392984416,0.290012154876366,0.462145851343933,0.460511024178389,0.413509717453592,0.322260734604821,0.290033387828457,0.255679882248303,0.623224249527161,0.165284915360978,0.768760269460425,0.638063562472921,0,0,1.25924938732256,1.3940745403212,1.54016790088044,0.532306030317022,4.34966496037536,2.03856641014312,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| ||
|short_description=p@chr12:124873905..124873916,- | |short_description=p@chr12:124873905..124873916,- | ||
}} | }} |
Latest revision as of 06:23, 24 July 2015
Short description: | p@chr12:124873905..124873916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124873905..124873916, - |
Coexpression cluster: | C2195_liposarcoma_Smooth_Fibroblast_CD14_giant_Hepatic_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-27 | 42 |
defensive cell | 5.66e-26 | 48 |
phagocyte | 5.66e-26 | 48 |
myeloid leukocyte | 1.17e-25 | 72 |
macrophage dendritic cell progenitor | 2.36e-23 | 61 |
monopoietic cell | 6.23e-23 | 59 |
monocyte | 6.23e-23 | 59 |
monoblast | 6.23e-23 | 59 |
promonocyte | 6.23e-23 | 59 |
granulocyte monocyte progenitor cell | 4.46e-20 | 67 |
myeloid lineage restricted progenitor cell | 3.86e-19 | 66 |
myeloid cell | 3.44e-13 | 108 |
common myeloid progenitor | 3.44e-13 | 108 |
leukocyte | 1.63e-09 | 136 |
granulocyte | 1.53e-07 | 8 |
nongranular leukocyte | 2.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.73e-19 | 203 |
bone marrow | 2.12e-17 | 76 |
bone element | 2.36e-16 | 82 |
skeletal element | 9.58e-14 | 90 |
immune system | 9.16e-13 | 93 |
skeletal system | 1.74e-12 | 100 |
hematopoietic system | 2.40e-12 | 98 |
blood island | 2.40e-12 | 98 |
hemolymphoid system | 8.82e-11 | 108 |
musculoskeletal system | 5.26e-10 | 167 |
mesoderm | 1.77e-09 | 315 |
mesoderm-derived structure | 1.77e-09 | 315 |
presumptive mesoderm | 1.77e-09 | 315 |
artery | 6.02e-07 | 42 |
arterial blood vessel | 6.02e-07 | 42 |
arterial system | 6.02e-07 | 42 |