FFCP PHASE1:Hg19::chr12:40013771..40013792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=225 | |EntrezGene=225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=66 | |HGNC=66 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBJ2 | |UniProt=Q9UBJ2 | ||
|association_with_transcript=50bp_to_NM_005164,uc001rmb.2_5end | |association_with_transcript=50bp_to_NM_005164,uc001rmb.2_5end | ||
|cluster_id=chr12:40013771..40013792,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_ABCD2_5end | |description=CAGE_peak_2_at_ABCD2_5end | ||
|id=chr12:40013771..40013792,- | |id=chr12:40013771..40013792,- | ||
|ontology_enrichment_celltype=CL:0000542!6.15e-38!53;CL:0000051!6.15e-38!53;CL:0000838!4.87e-37!52;CL:0000791!7.13e-21!18;CL:0000789!7.13e-21!18;CL:0002420!7.13e-21!18;CL:0002419!7.13e-21!18;CL:0000790!7.13e-21!18;CL:0000084!5.56e-20!25;CL:0000827!5.56e-20!25;CL:0002087!4.04e-17!119;CL:0000738!5.68e-17!140;CL:0000945!3.49e-15!24;CL:0000826!3.49e-15!24;CL:0000625!8.51e-14!11;CL:0000037!1.08e-13!172;CL:0000566!1.08e-13!172;CL:0000988!1.10e-13!182;CL:0002031!2.10e-12!124;CL:0002032!3.52e-11!165;CL:0000837!3.52e-11!165;CL:0000236!5.75e-11!14;CL:0000624!4.92e-08!6;CL:0000080!6.52e-07!6 | |ontology_enrichment_celltype=CL:0000542!6.15e-38!53;CL:0000051!6.15e-38!53;CL:0000838!4.87e-37!52;CL:0000791!7.13e-21!18;CL:0000789!7.13e-21!18;CL:0002420!7.13e-21!18;CL:0002419!7.13e-21!18;CL:0000790!7.13e-21!18;CL:0000084!5.56e-20!25;CL:0000827!5.56e-20!25;CL:0002087!4.04e-17!119;CL:0000738!5.68e-17!140;CL:0000945!3.49e-15!24;CL:0000826!3.49e-15!24;CL:0000625!8.51e-14!11;CL:0000037!1.08e-13!172;CL:0000566!1.08e-13!172;CL:0000988!1.10e-13!182;CL:0002031!2.10e-12!124;CL:0002032!3.52e-11!165;CL:0000837!3.52e-11!165;CL:0000236!5.75e-11!14;CL:0000624!4.92e-08!6;CL:0000080!6.52e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.20e-36;18!CL:0000789;9.20e-36;18!CL:0002419;9.20e-36;18!CL:0000084;1.88e-33;25!CL:0000542;9.70e-29;53!CL:0000625;1.67e-25;11!CL:0000624;2.84e-14;6!CL:0000945;3.60e-14;24!CL:0000236;3.12e-11;13!CL:0002087;1.78e-08;104!CL:0000898;3.26e-08;3!CL:0000623;2.07e-07;3!CL:0000226;3.18e-07;3!CL:0000842;3.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.63e-52,53;CL:0000051,5.63e-52,53;CL:0000838,2.56e-50,52;CL:0000791,1.01e-35,18;CL:0000789,1.01e-35,18;CL:0002420,1.01e-35,18;CL:0002419,1.01e-35,18;CL:0000790,1.01e-35,18;CL:0000084,1.62e-33,25;CL:0000827,1.62e-33,25;CL:0000738,9.37e-26,136;CL:0000625,1.65e-25,11;CL:0002087,2.24e-25,115;CL:0000988,1.22e-20,177;CL:0000037,2.51e-19,168;CL:0002031,1.03e-18,120;CL:0002032,1.61e-16,161;CL:0000837,1.61e-16,161;CL:0000624,3.17e-14,6;CL:0000945,3.99e-14,24;CL:0000826,3.99e-14,24;CL:0000236,8.82e-13,14;CL:0000898,3.26e-08,3;CL:0000623,2.08e-07,3;CL:0000825,2.08e-07,3;CL:0000226,3.59e-07,3;CL:0000842,3.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.20e-36;18!CL:0000051;9.70e-29;53!UBERON:0006215;2.98e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-25!115;UBERON:0000178!2.47e-15!15;UBERON:0000179!2.47e-15!15;UBERON:0000463!2.47e-15!15;UBERON:0001049!8.70e-10!57;UBERON:0005068!8.70e-10!57;UBERON:0006241!8.70e-10!57;UBERON:0007135!8.70e-10!57;UBERON:0001950!5.30e-09!20;UBERON:0002616!1.68e-08!59;UBERON:0003080!2.94e-08!42;UBERON:0005743!3.40e-08!86;UBERON:0001017!5.85e-08!82;UBERON:0002619!8.14e-08!22;UBERON:0002780!9.75e-08!41;UBERON:0001890!9.75e-08!41;UBERON:0006240!9.75e-08!41;UBERON:0000955!1.63e-07!69;UBERON:0006238!1.63e-07!69;UBERON:0000073!2.63e-07!94;UBERON:0001016!2.63e-07!94;UBERON:0001869!5.16e-07!32;UBERON:0001893!5.85e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!4.52e-25!115;UBERON:0000178!2.47e-15!15;UBERON:0000179!2.47e-15!15;UBERON:0000463!2.47e-15!15;UBERON:0001049!8.70e-10!57;UBERON:0005068!8.70e-10!57;UBERON:0006241!8.70e-10!57;UBERON:0007135!8.70e-10!57;UBERON:0001950!5.30e-09!20;UBERON:0002616!1.68e-08!59;UBERON:0003080!2.94e-08!42;UBERON:0005743!3.40e-08!86;UBERON:0001017!5.85e-08!82;UBERON:0002619!8.14e-08!22;UBERON:0002780!9.75e-08!41;UBERON:0001890!9.75e-08!41;UBERON:0006240!9.75e-08!41;UBERON:0000955!1.63e-07!69;UBERON:0006238!1.63e-07!69;UBERON:0000073!2.63e-07!94;UBERON:0001016!2.63e-07!94;UBERON:0001869!5.16e-07!32;UBERON:0001893!5.85e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.36e-25;15!UBERON:0000179;2.36e-25;15!UBERON:0000463;2.36e-25;15!UBERON:0002390;1.00e-12;32!UBERON:0002193;3.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.85e-25,15;UBERON:0000179,4.85e-25,15;UBERON:0000463,4.85e-25,15 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96687137361683,6.48594656654571,6.0607301611533,0,3.0706351847777,0,0,0,0,0,0,0,1.66198622559563,0.200544447470142,1.08505435357926,0.223915474239924,2.26725566213286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,1.77901850772711,1.70692089026603,1.60158394814405,1.14950487990897,1.32208974556972,5.72432252721218,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,0,6.09800287352883,4.32311839024081,4.31763147898969,3.67810289859492,9.12582346574053,9.46895611469466,5.84480185223734,7.35309015442146,8.83817722424511,10.6336269400138,18.4146627360211,3.5865569523189,3.51160238411671,13.6483460821051,19.6208512627952,15.6493666296928,5.78317596332036,7.75868401460168,5.22677619024884,9.85791281468826,7.66440987203842,8.59068613706575,8.6026695286631,11.1497895013434,13.6727525309848,14.2567806667256,11.4437090499107,12.6706745042874,12.4930726552346,13.0227488624209,13.1380479507367,4.83856183739358,2.40696176205157,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0.348259474598534,0.26591592103773,0.715471872916026,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.672510863961164,4.53170748464433,4.09692392233083,2.82354679815446,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,2.5885704098234,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,3.04468565539302,2.29391162142713,1.13929437434833,5.24109906007136,5.75907182320672,2.59389324477087,5.40031437238115,0.79312517629427,0,0,0,1.67222857613147,0,0.213425530045242,0,0,0,0,0,0.280797178113459,1.36940807419915,0,0,0,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0.586032717087576,0,1.33732061132974,0,0,0,0,0,0.281338832821026,0,0,0,0,1.93398740871803,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,6.10326945268333,3.53853631779919,1.18219047581419,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.353830258013357,0,2.07564790076435,1.48276726735803,1.25306339406546,0.067401132980677,0,0.234264445725339,0.547364367646998,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0.633107959558787,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,1.8402114799552,0,0.687481272035051,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0,0,0,0.427149650270779,0.157204305099666,0,0.496166021811951,1.18566979138767,0.487170393523584,0,1.63205341010842,1.5041393641362,1.53172788381731,1.63936315354902,0,0,0.732157589411779,0.751145584238999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,2.53318401491205,1.46151324344699,1.79921933681429,0,0,0,4.99968489637325,0,2.75543967457305,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.478901577171454,0.615349092722265,1.26035848110859,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.380494861163441,1.64092442705466,0,0,0,0,0.535701835878287,1.3451348888753,0,0.227662191351298,0,3.11131766400604,0,0.611727596791485,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.845855261818682,0.0644578879735772,4.69723432847166,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.710478008196067,0.186224142887574,0,0.12729431655633,0.2021171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| ||
|short_description=p2@ABCD2 | |short_description=p2@ABCD2 | ||
}} | }} |
Latest revision as of 06:27, 18 September 2015
Short description: | p2@ABCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCD2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 50bp_to_NM_005164, uc001rmb.2_5end |
EntrezGene: | ABCD2 |
HGNC: | 66 |
UniProt: | Q9UBJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.63e-52 | 53 |
common lymphoid progenitor | 5.63e-52 | 53 |
lymphoid lineage restricted progenitor cell | 2.56e-50 | 52 |
mature alpha-beta T cell | 1.01e-35 | 18 |
alpha-beta T cell | 1.01e-35 | 18 |
immature T cell | 1.01e-35 | 18 |
mature T cell | 1.01e-35 | 18 |
immature alpha-beta T cell | 1.01e-35 | 18 |
T cell | 1.62e-33 | 25 |
pro-T cell | 1.62e-33 | 25 |
leukocyte | 9.37e-26 | 136 |
CD8-positive, alpha-beta T cell | 1.65e-25 | 11 |
nongranular leukocyte | 2.24e-25 | 115 |
hematopoietic cell | 1.22e-20 | 177 |
hematopoietic stem cell | 2.51e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.03e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.61e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-16 | 161 |
CD4-positive, alpha-beta T cell | 3.17e-14 | 6 |
lymphocyte of B lineage | 3.99e-14 | 24 |
pro-B cell | 3.99e-14 | 24 |
B cell | 8.82e-13 | 14 |
naive T cell | 3.26e-08 | 3 |
natural killer cell | 2.08e-07 | 3 |
pro-NK cell | 2.08e-07 | 3 |
single nucleate cell | 3.59e-07 | 3 |
mononuclear cell | 3.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.85e-25 | 15 |
haemolymphatic fluid | 4.85e-25 | 15 |
organism substance | 4.85e-25 | 15 |