FFCP PHASE1:Hg19::chr12:56105984..56106019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3679 | |EntrezGene=3679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6143 | |HGNC=6143 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553276_5end | |association_with_transcript=0bp_to_ENST00000553276_5end | ||
|cluster_id=chr12:56105984..56106019,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_4_at_ITGA7_5end | |description=CAGE_peak_4_at_ITGA7_5end | ||
|id=chr12:56105984..56106019,- | |id=chr12:56105984..56106019,- | ||
|ontology_enrichment_celltype=CL:0000136!6.45e-21!15;CL:0002521!3.93e-08!3;CL:0002615!9.76e-08!3;CL:0000325!2.16e-07!39 | |ontology_enrichment_celltype=CL:0000136!6.45e-21!15;CL:0002521!3.93e-08!3;CL:0002615!9.76e-08!3;CL:0000325!2.16e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.25e-57;13!CL:0002521;9.98e-20;3!CL:0002615;9.87e-19;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.36e-49,15;CL:0002521,1.06e-19,3;CL:0002615,1.30e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.01e-08;1!UBERON:0010226;1.18e-07;1!UBERON:0004140;1.18e-07;1!UBERON:0010227;1.74e-07;1!UBERON:0005062;2.55e-07;4!UBERON:0007284;2.55e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.27e-13;2!DOID:178;1.18e-07;1!DOID:326;1.18e-07;1!DOID:3978;1.18e-07;1!DOID:3394;1.18e-07;1!DOID:5844;1.18e-07;1!DOID:1287;3.08e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.44e-13,2;DOID:178,1.30e-07,1;DOID:326,1.30e-07,1;DOID:3978,1.30e-07,1;DOID:3394,1.30e-07,1;DOID:5844,1.30e-07,1;DOID:1287,3.28e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002190;9.98e-20;3!UBERON:0007100;5.58e-15;25!UBERON:0002072;4.66e-12;5!UBERON:0003688;1.21e-09;6!UBERON:0002358;1.21e-09;6!UBERON:0003684;1.21e-09;6!UBERON:0001178;1.21e-09;6!UBERON:0003978;1.73e-09;3!UBERON:0000946;1.73e-09;3!UBERON:0004151;2.87e-09;3!UBERON:0001723;6.05e-09;3!UBERON:0001033;6.05e-09;3!UBERON:0000989;8.01e-08;1!UBERON:0002146;8.01e-08;1!UBERON:0008811;8.01e-08;1!UBERON:0002426;8.01e-08;1!UBERON:0003831;8.01e-08;1!UBERON:0003898;8.01e-08;1!UBERON:0004830;8.01e-08;1!UBERON:0005623;8.01e-08;1!UBERON:0003830;8.01e-08;1!UBERON:0005175;8.01e-08;1!UBERON:0001774;8.01e-08;1!UBERON:0001103;8.01e-08;1!UBERON:0002084;1.18e-07;1!UBERON:0002135;1.18e-07;1!UBERON:0002082;1.18e-07;1!UBERON:0001013;1.65e-07;14!UBERON:0002079;1.74e-07;1!UBERON:0007029;2.54e-07;1!UBERON:0001874;2.54e-07;1!UBERON:0000948;5.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.06e-19,3;UBERON:0007100,8.74e-14,27;UBERON:0002072,4.84e-12,5;UBERON:0003688,1.39e-09,6;UBERON:0002358,1.39e-09,6;UBERON:0003684,1.39e-09,6;UBERON:0001178,1.39e-09,6;UBERON:0003978,2.05e-09,3;UBERON:0009751,2.05e-09,3;UBERON:0000946,2.05e-09,3;UBERON:0002523,2.05e-09,3;UBERON:0005983,2.05e-09,3;UBERON:0002165,2.05e-09,3;UBERON:0002062,2.05e-09,3;UBERON:0007280,2.05e-09,3;UBERON:0004151,2.64e-09,3;UBERON:0007023,2.82e-09,114;UBERON:0001723,5.35e-09,3;UBERON:0001033,5.35e-09,3;UBERON:0010056,5.35e-09,3;UBERON:0000989,7.26e-08,1;UBERON:0008811,7.26e-08,1;UBERON:0006258,7.26e-08,1;UBERON:0005876,7.26e-08,1;UBERON:0004874,7.26e-08,1;UBERON:0002146,8.28e-08,1;UBERON:0005623,8.28e-08,1;UBERON:0002426,8.84e-08,1;UBERON:0003831,8.84e-08,1;UBERON:0003898,8.84e-08,1;UBERON:0004830,8.84e-08,1;UBERON:0003830,8.84e-08,1;UBERON:0005175,8.84e-08,1;UBERON:0001774,8.84e-08,1;UBERON:0001103,8.84e-08,1;UBERON:0010084,8.84e-08,1;UBERON:0002084,9.44e-08,1;UBERON:0002082,9.44e-08,1;UBERON:0010226,9.44e-08,1;UBERON:0002135,1.48e-07,1;UBERON:0001013,1.68e-07,14;UBERON:0003103,1.89e-07,68;UBERON:0002079,1.91e-07,1;UBERON:0007029,2.17e-07,1;UBERON:0001874,2.98e-07,1 | |||
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|short_description=p4@ITGA7 | |short_description=p4@ITGA7 | ||
}} | }} |
Latest revision as of 07:51, 19 September 2015
Short description: | p4@ITGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA7_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000553276_5end |
EntrezGene: | ITGA7 |
HGNC: | 6143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.36e-49 | 15 |
subcutaneous fat cell | 1.06e-19 | 3 |
adipocyte of omentum tissue | 1.30e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.44e-13 | 2 |
vascular disease | 1.30e-07 | 1 |
ischemia | 1.30e-07 | 1 |
extrinsic cardiomyopathy | 1.30e-07 | 1 |
myocardial ischemia | 1.30e-07 | 1 |
myocardial infarction | 1.30e-07 | 1 |
cardiovascular system disease | 3.28e-07 | 4 |