FFCP PHASE1:Hg19::chr13:51381967..51381988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc001vey.2_5end | |association_with_transcript=-2bp_to_uc001vey.2_5end | ||
|cluster_id=chr13:51381967..51381988,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_3_at_uc001vey.2_5end | |description=CAGE_peak_3_at_uc001vey.2_5end | ||
|id=chr13:51381967..51381988,+ | |id=chr13:51381967..51381988,+ | ||
|ontology_enrichment_celltype=CL:0000453!1.09e-28!5;CL:0000819!2.25e-16!1;CL:0000990!2.93e-16!8;CL:0000451!2.02e-13!10;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0000738!4.91e-08!140 | |ontology_enrichment_celltype=CL:0000453!1.09e-28!5;CL:0000819!2.25e-16!1;CL:0000990!2.93e-16!8;CL:0000451!2.02e-13!10;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0000738!4.91e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.89e-45;5!CL:0000990;1.17e-25;8!CL:0000451;3.79e-21;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.89e-45,5;CL:0000990,1.17e-25,8;CL:0000451,3.79e-21,10;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000763,2.70e-08,108;CL:0000049,2.70e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!1.41e-16!1;DOID:0060073!2.25e-16!1;DOID:8675!2.25e-16!1;DOID:2531!1.39e-10!51;DOID:0060083!1.39e-10!51;DOID:1240!7.10e-10!39 | |ontology_enrichment_disease=DOID:12603!1.41e-16!1;DOID:0060073!2.25e-16!1;DOID:8675!2.25e-16!1;DOID:2531!1.39e-10!51;DOID:0060083!1.39e-10!51;DOID:1240!7.10e-10!39 | ||
|ontology_enrichment_disease_v019=DOID:12603;1.11e-25;1!DOID:1240;1.01e-14;39!DOID:2531;1.41e-08;51!DOID:0060083;1.41e-08;51!DOID:8692;1.13e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.26e-25,1;DOID:1240,5.03e-16,39;DOID:2531,2.53e-12,51;DOID:0060083,2.53e-12,51;DOID:8692,7.90e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.62e-20!7;UBERON:0002370!4.87e-16!4;UBERON:0005058!4.87e-16!4;UBERON:0009113!4.87e-16!4;UBERON:0003295!4.87e-16!4;UBERON:0005562!4.87e-16!4;UBERON:0003351!5.09e-11!6;UBERON:0000974!5.76e-07!10;UBERON:0003408!5.76e-07!10;UBERON:0001042!5.76e-07!10;UBERON:0009145!5.76e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!6.62e-20!7;UBERON:0002370!4.87e-16!4;UBERON:0005058!4.87e-16!4;UBERON:0009113!4.87e-16!4;UBERON:0003295!4.87e-16!4;UBERON:0005562!4.87e-16!4;UBERON:0003351!5.09e-11!6;UBERON:0000974!5.76e-07!10;UBERON:0003408!5.76e-07!10;UBERON:0001042!5.76e-07!10;UBERON:0009145!5.76e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@uc001vey.2 | |short_description=p3@uc001vey.2 | ||
}} | }} |
Latest revision as of 16:43, 24 July 2015
Short description: | p3@uc001vey.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001vey.2_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -2bp_to_uc001vey.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.89e-45 | 5 |
conventional dendritic cell | 1.17e-25 | 8 |
dendritic cell | 3.79e-21 | 10 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
myeloid cell | 2.70e-08 | 108 |
common myeloid progenitor | 2.70e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.26e-25 | 1 |
leukemia | 5.03e-16 | 39 |
hematologic cancer | 2.53e-12 | 51 |
immune system cancer | 2.53e-12 | 51 |
myeloid leukemia | 7.90e-08 | 31 |