FFCP PHASE1:Hg19::chr14:105939326..105939337,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1397 | |EntrezGene=1397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2361 | |HGNC=2361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc010tyr.1_5end | |association_with_transcript=-5bp_to_uc010tyr.1_5end | ||
|cluster_id=chr14:105939326..105939337,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_16_at_CRIP2_5end | |description=CAGE_peak_16_at_CRIP2_5end | ||
|id=chr14:105939326..105939337,+ | |id=chr14:105939326..105939337,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.73e-09!9 | |ontology_enrichment_celltype=CL:0000188!1.73e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000632;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.07e-55;4!UBERON:0007284;1.07e-55;4!UBERON:0004140;2.15e-26;1!UBERON:0010226;6.72e-26;1!UBERON:0003104;1.07e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.36e-19!2;DOID:178!1.57e-10!1;DOID:326!1.57e-10!1;DOID:3978!1.57e-10!1;DOID:3394!1.57e-10!1;DOID:5844!1.57e-10!1;DOID:1287!2.88e-10!4 | |ontology_enrichment_disease=DOID:114!1.36e-19!2;DOID:178!1.57e-10!1;DOID:326!1.57e-10!1;DOID:3978!1.57e-10!1;DOID:3394!1.57e-10!1;DOID:5844!1.57e-10!1;DOID:1287!2.88e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.14e-13;2!DOID:1287;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.28e-14,2;DOID:1287,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.42e-28!3;UBERON:0009751!1.42e-28!3;UBERON:0000946!1.42e-28!3;UBERON:0002523!1.42e-28!3;UBERON:0005983!1.42e-28!3;UBERON:0002165!1.42e-28!3;UBERON:0002062!1.42e-28!3;UBERON:0007280!1.42e-28!3;UBERON:0004151!2.99e-28!3;UBERON:0007100!1.21e-26!27;UBERON:0002133!1.36e-19!2;UBERON:0002081!1.97e-19!2;UBERON:0000948!1.54e-13!24;UBERON:0005498!1.54e-13!24;UBERON:0004140!1.54e-13!24;UBERON:0009881!1.54e-13!24;UBERON:0004141!1.54e-13!24;UBERON:0003084!1.54e-13!24;UBERON:0007005!1.54e-13!24;UBERON:0004139!1.54e-13!24;UBERON:0004291!1.54e-13!24;UBERON:0003103!6.40e-12!69;UBERON:0002146!8.95e-11!1;UBERON:0005623!8.95e-11!1;UBERON:0002134!1.08e-10!1;UBERON:0005208!1.08e-10!1;UBERON:0005946!1.08e-10!1;UBERON:0005965!1.08e-10!1;UBERON:0002078!1.08e-10!1;UBERON:0002135!1.19e-10!1;UBERON:0002084!1.30e-10!1;UBERON:0002082!1.30e-10!1;UBERON:0004706!1.30e-10!1;UBERON:0002079!1.73e-10!1 | |ontology_enrichment_uberon=UBERON:0003978!1.42e-28!3;UBERON:0009751!1.42e-28!3;UBERON:0000946!1.42e-28!3;UBERON:0002523!1.42e-28!3;UBERON:0005983!1.42e-28!3;UBERON:0002165!1.42e-28!3;UBERON:0002062!1.42e-28!3;UBERON:0007280!1.42e-28!3;UBERON:0004151!2.99e-28!3;UBERON:0007100!1.21e-26!27;UBERON:0002133!1.36e-19!2;UBERON:0002081!1.97e-19!2;UBERON:0000948!1.54e-13!24;UBERON:0005498!1.54e-13!24;UBERON:0004140!1.54e-13!24;UBERON:0009881!1.54e-13!24;UBERON:0004141!1.54e-13!24;UBERON:0003084!1.54e-13!24;UBERON:0007005!1.54e-13!24;UBERON:0004139!1.54e-13!24;UBERON:0004291!1.54e-13!24;UBERON:0003103!6.40e-12!69;UBERON:0002146!8.95e-11!1;UBERON:0005623!8.95e-11!1;UBERON:0002134!1.08e-10!1;UBERON:0005208!1.08e-10!1;UBERON:0005946!1.08e-10!1;UBERON:0005965!1.08e-10!1;UBERON:0002078!1.08e-10!1;UBERON:0002135!1.19e-10!1;UBERON:0002084!1.30e-10!1;UBERON:0002082!1.30e-10!1;UBERON:0004706!1.30e-10!1;UBERON:0002079!1.73e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.61e-74;3!UBERON:0000946;6.61e-74;3!UBERON:0002133;6.61e-50;2!UBERON:0007100;2.97e-48;25!UBERON:0004151;1.07e-33;3!UBERON:0000948;2.77e-28;22!UBERON:0002084;6.72e-26;1!UBERON:0002135;6.72e-26;1!UBERON:0002146;6.72e-26;1!UBERON:0002134;6.72e-26;1!UBERON:0002082;6.72e-26;1!UBERON:0005208;6.72e-26;1!UBERON:0005623;6.72e-26;1!UBERON:0004145;6.72e-26;1!UBERON:0005946;6.72e-26;1!UBERON:0005965;6.72e-26;1!UBERON:0002078;6.72e-26;1!UBERON:0010313;7.74e-23;10!UBERON:0002081;1.14e-13;2!UBERON:0003103;2.71e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.51e-74,3;UBERON:0009751,7.51e-74,3;UBERON:0000946,7.51e-74,3;UBERON:0002523,7.51e-74,3;UBERON:0005983,7.51e-74,3;UBERON:0002165,7.51e-74,3;UBERON:0002062,7.51e-74,3;UBERON:0007280,7.51e-74,3;UBERON:0002133,1.09e-49,2;UBERON:0007100,1.09e-44,27;UBERON:0004151,1.77e-33,3;UBERON:0004797,3.19e-32,7;UBERON:0002146,4.61e-26,1;UBERON:0005623,4.61e-26,1;UBERON:0000948,6.76e-26,24;UBERON:0005498,6.76e-26,24;UBERON:0004140,6.76e-26,24;UBERON:0009881,6.76e-26,24;UBERON:0004141,6.76e-26,24;UBERON:0003084,6.76e-26,24;UBERON:0007005,6.76e-26,24;UBERON:0004139,6.76e-26,24;UBERON:0004291,6.76e-26,24;UBERON:0002134,7.62e-26,1;UBERON:0005208,7.62e-26,1;UBERON:0005946,7.62e-26,1;UBERON:0005965,7.62e-26,1;UBERON:0002078,7.62e-26,1;UBERON:0002135,9.79e-26,1;UBERON:0002084,1.26e-25,1;UBERON:0002082,1.26e-25,1;UBERON:0010226,1.26e-25,1;UBERON:0010313,8.04e-23,10;UBERON:0002342,8.04e-23,10;UBERON:0005062,8.04e-23,10;UBERON:0003103,7.24e-18,68;UBERON:0002081,1.21e-13,2;UBERON:0010227,1.21e-13,2;UBERON:0001009,7.30e-11,112;UBERON:0004145,1.54e-09,3;UBERON:0007023,6.74e-08,114;UBERON:0003914,1.09e-07,117;UBERON:0004872,1.12e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.60412296808179,1.43574604915363,0.798716001995964,1.71690419254628,3.57074331906996,9.67442003808858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.60412296808179,1.43574604915363,0.798716001995964,1.71690419254628,3.57074331906996,9.67442003808858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@CRIP2 | |short_description=p16@CRIP2 | ||
}} | }} |
Latest revision as of 19:05, 18 September 2015
Short description: | p16@CRIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CRIP2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -5bp_to_uc010tyr.1_5end |
EntrezGene: | CRIP2 |
HGNC: | 2361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.28e-14 | 2 |
cardiovascular system disease | 1.49e-07 | 4 |