FFCP PHASE1:Hg19::chr14:23000927..23000938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc001wgb.2_5end | |association_with_transcript=36bp_to_uc001wgb.2_5end | ||
|cluster_id=chr14:23000927..23000938,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_1_at_uc001wgb.2_5end | |description=CAGE_peak_1_at_uc001wgb.2_5end | ||
|id=chr14:23000927..23000938,+ | |id=chr14:23000927..23000938,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.12e-27!52;CL:0000542!8.49e-27!53;CL:0000051!8.49e-27!53;CL:0002087!1.10e-14!119;CL:0002031!6.95e-14!124;CL:0000738!5.56e-13!140;CL:0000084!6.16e-13!25;CL:0000827!6.16e-13!25;CL:0000988!5.15e-12!182;CL:0000945!1.69e-11!24;CL:0000826!1.69e-11!24;CL:0002032!3.32e-10!165;CL:0000837!3.32e-10!165;CL:0000037!1.42e-09!172;CL:0000566!1.42e-09!172;CL:0000791!2.45e-08!18;CL:0000789!2.45e-08!18;CL:0002420!2.45e-08!18;CL:0002419!2.45e-08!18;CL:0000790!2.45e-08!18;CL:0000080!7.98e-08!6;CL:0000624!3.77e-07!6;CL:0000623!6.17e-07!3;CL:0000825!6.17e-07!3 | |ontology_enrichment_celltype=CL:0000838!2.12e-27!52;CL:0000542!8.49e-27!53;CL:0000051!8.49e-27!53;CL:0002087!1.10e-14!119;CL:0002031!6.95e-14!124;CL:0000738!5.56e-13!140;CL:0000084!6.16e-13!25;CL:0000827!6.16e-13!25;CL:0000988!5.15e-12!182;CL:0000945!1.69e-11!24;CL:0000826!1.69e-11!24;CL:0002032!3.32e-10!165;CL:0000837!3.32e-10!165;CL:0000037!1.42e-09!172;CL:0000566!1.42e-09!172;CL:0000791!2.45e-08!18;CL:0000789!2.45e-08!18;CL:0002420!2.45e-08!18;CL:0002419!2.45e-08!18;CL:0000790!2.45e-08!18;CL:0000080!7.98e-08!6;CL:0000624!3.77e-07!6;CL:0000623!6.17e-07!3;CL:0000825!6.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.02e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.92e-19,24;CL:0000826,1.92e-19,24;CL:0000838,2.96e-09,52;CL:0000542,4.34e-09,53;CL:0000051,4.34e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.07e-07!3;UBERON:0004854!8.07e-07!3;UBERON:0009034!8.07e-07!3;UBERON:0002095!8.07e-07!3;UBERON:0004782!8.07e-07!3;UBERON:0003281!8.07e-07!3;UBERON:0009664!8.07e-07!3;UBERON:0002296!8.07e-07!3;UBERON:0005602!8.07e-07!3;UBERON:0001179!8.07e-07!3;UBERON:0006293!8.07e-07!3 | |ontology_enrichment_uberon=UBERON:0002106!8.07e-07!3;UBERON:0004854!8.07e-07!3;UBERON:0009034!8.07e-07!3;UBERON:0002095!8.07e-07!3;UBERON:0004782!8.07e-07!3;UBERON:0003281!8.07e-07!3;UBERON:0009664!8.07e-07!3;UBERON:0002296!8.07e-07!3;UBERON:0005602!8.07e-07!3;UBERON:0001179!8.07e-07!3;UBERON:0006293!8.07e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.81e-12;10!UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.81e-12,10;UBERON:0000358,2.81e-12,10;UBERON:0000307,2.81e-12,10;UBERON:0000091,2.81e-12,10;UBERON:0000087,2.81e-12,10;UBERON:0007010,2.81e-12,10;UBERON:0007806,2.81e-12,10;UBERON:0008780,2.81e-12,10;UBERON:0005728,2.81e-12,10;UBERON:0000178,1.65e-08,15;UBERON:0000179,1.65e-08,15;UBERON:0000463,1.65e-08,15 | |||
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|short_description=p1@uc001wgb.2 | |short_description=p1@uc001wgb.2 | ||
}} | }} |
Latest revision as of 19:15, 24 July 2015
Short description: | p1@uc001wgb.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wgb.2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 36bp_to_uc001wgb.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.92e-19 | 24 |
pro-B cell | 1.92e-19 | 24 |
lymphoid lineage restricted progenitor cell | 2.96e-09 | 52 |
lymphocyte | 4.34e-09 | 53 |
common lymphoid progenitor | 4.34e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.81e-12 | 10 |
blastocyst | 2.81e-12 | 10 |
blastula | 2.81e-12 | 10 |
bilaminar disc | 2.81e-12 | 10 |
inner cell mass | 2.81e-12 | 10 |
cleaving embryo | 2.81e-12 | 10 |
connecting stalk | 2.81e-12 | 10 |
inner cell mass derived epiblast | 2.81e-12 | 10 |
extraembryonic mesoderm | 2.81e-12 | 10 |
blood | 1.65e-08 | 15 |
haemolymphatic fluid | 1.65e-08 | 15 |
organism substance | 1.65e-08 | 15 |