FFCP PHASE1:Hg19::chr18:47340623..47340647,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47340623..47340647,-
|short_description=p9@ACAA2
|description=CAGE_peak_9_at_ACAA2_5end
|association_with_transcript=-340bp_to_uc002ldx.3_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-340bp_to_uc002ldx.3_5end | |||
|cluster_id=chr18:47340623..47340647,- | |||
|description=CAGE_peak_9_at_ACAA2_5end | |||
|id=chr18:47340623..47340647,- | |||
|ontology_enrichment_celltype=CL:0000791!2.80e-09!18;CL:0000789!2.80e-09!18;CL:0002420!2.80e-09!18;CL:0002419!2.80e-09!18;CL:0000790!2.80e-09!18;CL:0000084!3.86e-07!25;CL:0000827!3.86e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.80e-21;18!CL:0000789;5.80e-21;18!CL:0002419;5.80e-21;18!CL:0000084;3.64e-14;25!CL:0000624;1.23e-10;6!CL:0000625;1.66e-10;11!CL:0000623;2.81e-09;3!CL:0000226;1.81e-08;3!CL:0000842;1.81e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.65e-21,18;CL:0000789,2.65e-21,18;CL:0002420,2.65e-21,18;CL:0002419,2.65e-21,18;CL:0000790,2.65e-21,18;CL:0000084,2.12e-14,25;CL:0000827,2.12e-14,25;CL:0000624,7.06e-11,6;CL:0000625,1.47e-10,11;CL:0000838,4.00e-10,52;CL:0000542,7.49e-10,53;CL:0000051,7.49e-10,53;CL:0000623,2.78e-09,3;CL:0000825,2.78e-09,3;CL:0000226,3.98e-08,3;CL:0000842,3.98e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.80e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.41e-15;15!UBERON:0000179;5.41e-15;15!UBERON:0000463;5.41e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.19e-15,15;UBERON:0000179,7.19e-15,15;UBERON:0000463,7.19e-15,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,5.06599756336621,0,1.56711376919903,0.245733936501509,0.697801167972428,0.218441372130172,0.791300934685361,0,1.32558950291166,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0.286235987131057,0,0,0,0,0,0.393364276848904,1.91914699048606,0.77408061658038,0,0,0.369754010166788,0,0,0,2.21598163412751,0.601633342410425,2.17010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,1.1507695692886,0,0,0.689491361473237,0,0,0.752969358170419,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0,0.661044872784862,0,1.70763890732835,0,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,2.16380747125216,4.32311839024081,2.2616164889946,0.334372990781356,1.95553359980154,0.946895611469467,3.89653456815823,0.557052284425868,0.589211814949674,0.443067789167242,0.270803863765016,0.640456598628376,1.1705341280389,1.80881695064044,1.10540007114339,0.579606171470105,0.741432815810302,1.07016331235885,2.09071047609954,0.339928028092699,1.53288197440768,1.71813722741315,0.759059076058509,1.27426165729639,1.30216690771284,1.90090408889675,0.301150238155546,0.255973222308837,0,1.18388626022008,0.821127996921047,3.42731463482045,6.41856469880418,6.37227377084316,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0.665188192387692,0.263504357079378,0.72038491523742,0,0.370784442784429,0.649094787309367,0,0.398873881556595,0.476981248610684,0,0.371457501329565,0,0,0,0.56530794192401,0.838998872419812,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0.12663051166458,2.25095607382472,0.286836620748814,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0.624320153660641,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0.340296549480063,0,0.427114777637135,0,1.20036438433761,0,0.515281080091258,0,0.843881661206331,0,1.00973509697646,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.731842236777572,0.397589304964456,0.348581828608555,0.621966330092223,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0,0,0.220587945464788,0,0,0.943819157121151,1.17732879075208,0.38474715694639,0,0,0,0,1.26755034821831,0,2.36315962672562,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.570762456703795,0,0,0.738651018262192,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0.621984346622316,0,0.37872730027914,0.063497894292169,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,1.56919201590938,3.34952292343276,4.74380664690938,9.36904164842163,0,0,0.773288812777695,0.837581326671744,1.91381625495949,0,0,0.414415513436035,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,1.03384013061444,3.01999881146064,2.02782359826544,0.303127571446259,1.66435439510497,0,0,1.07423381301644,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0.447749509444357,1.97333888981341,1.3071772551245,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.660075999364704,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.551346289938122,0,0.435050081742686,0.426133137080504,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0.632758849437452,0.190630193923825,0.511795582622668,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.376575203107117,0.86101074534246,0,0.443430153536676,0.229723400206959,1.01489521846434,1.52927441428475,1.70894156152249,1.66762242820452,3.29089818468955,0,0,3.17250070517708,0.320472213382419,0.962479855263359,0,0,0,0,0.159426272728822,0.199579371432817,0.383010740264733,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0.293016358543788,0.36408156524854,0.334330152832435,0.284136146806413,0.47748896947538,0,0,0,0.281338832821026,0.222617410045812,0.329607748453519,0,0.597743964753209,0.276283915531148,0.755798243562828,0.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| ||
|short_description=p9@ACAA2 | |||
}} | }} |
Latest revision as of 18:00, 19 September 2015
Short description: | p9@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACAA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -340bp_to_uc002ldx.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.65e-21 | 18 |
alpha-beta T cell | 2.65e-21 | 18 |
immature T cell | 2.65e-21 | 18 |
mature T cell | 2.65e-21 | 18 |
immature alpha-beta T cell | 2.65e-21 | 18 |
T cell | 2.12e-14 | 25 |
pro-T cell | 2.12e-14 | 25 |
CD4-positive, alpha-beta T cell | 7.06e-11 | 6 |
CD8-positive, alpha-beta T cell | 1.47e-10 | 11 |
lymphoid lineage restricted progenitor cell | 4.00e-10 | 52 |
lymphocyte | 7.49e-10 | 53 |
common lymphoid progenitor | 7.49e-10 | 53 |
natural killer cell | 2.78e-09 | 3 |
pro-NK cell | 2.78e-09 | 3 |
single nucleate cell | 3.98e-08 | 3 |
mononuclear cell | 3.98e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.19e-15 | 15 |
haemolymphatic fluid | 7.19e-15 | 15 |
organism substance | 7.19e-15 | 15 |