FFCP PHASE1:Hg19::chr17:78695021..78695044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=335bp_to_BC127818_5end | |association_with_transcript=335bp_to_BC127818_5end | ||
|cluster_id=chr17:78695021..78695044,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_1_at_BC127818_5end | |description=CAGE_peak_1_at_BC127818_5end | ||
|id=chr17:78695021..78695044,+ | |id=chr17:78695021..78695044,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.34e-25!18;CL:0000789!4.34e-25!18;CL:0002420!4.34e-25!18;CL:0002419!4.34e-25!18;CL:0000790!4.34e-25!18;CL:0000084!3.92e-24!25;CL:0000827!3.92e-24!25;CL:0000625!1.43e-20!11;CL:0000542!8.43e-15!53;CL:0000051!8.43e-15!53;CL:0000838!8.59e-14!52;CL:0002087!7.01e-11!119;CL:0000738!6.47e-10!140;CL:0002031!3.98e-07!124;CL:0000623!7.54e-07!3;CL:0000825!7.54e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.34e-25!18;CL:0000789!4.34e-25!18;CL:0002420!4.34e-25!18;CL:0002419!4.34e-25!18;CL:0000790!4.34e-25!18;CL:0000084!3.92e-24!25;CL:0000827!3.92e-24!25;CL:0000625!1.43e-20!11;CL:0000542!8.43e-15!53;CL:0000051!8.43e-15!53;CL:0000838!8.59e-14!52;CL:0002087!7.01e-11!119;CL:0000738!6.47e-10!140;CL:0002031!3.98e-07!124;CL:0000623!7.54e-07!3;CL:0000825!7.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.23e-49;11!CL:0000084;4.30e-48;25!CL:0000791;2.04e-46;18!CL:0000789;2.04e-46;18!CL:0002419;2.04e-46;18!CL:0000542;7.03e-23;53!CL:0000623;2.12e-12;3!CL:0002127;6.32e-10;1!CL:0000785;6.32e-10;1!CL:0000911;6.32e-10;1!CL:0000895;6.32e-10;1!CL:0000819;6.32e-10;1!CL:0000814;6.32e-10;1!CL:0002087;1.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.09e-49,11;CL:0000084,4.15e-48,25;CL:0000827,4.15e-48,25;CL:0000791,1.96e-46,18;CL:0000789,1.96e-46,18;CL:0002420,1.96e-46,18;CL:0002419,1.96e-46,18;CL:0000790,1.96e-46,18;CL:0000838,6.80e-35,52;CL:0000542,3.44e-34,53;CL:0000051,3.44e-34,53;CL:0000893,2.43e-18,2;CL:0002489,2.43e-18,2;CL:0000809,2.43e-18,2;CL:0000808,2.43e-18,2;CL:0000894,2.43e-18,2;CL:0000806,2.43e-18,2;CL:0000807,2.43e-18,2;CL:0000805,2.43e-18,2;CL:0002425,2.43e-18,2;CL:0002087,2.99e-14,115;CL:0002031,1.48e-13,120;CL:0000738,1.59e-13,136;CL:0000623,2.25e-12,3;CL:0000825,2.25e-12,3;CL:0000037,1.93e-10,168;CL:0002127,3.71e-10,1;CL:0000914,3.71e-10,1;CL:0000911,3.71e-10,1;CL:0000814,3.71e-10,1;CL:0002042,3.71e-10,1;CL:0002039,3.71e-10,1;CL:0002040,3.71e-10,1;CL:0002041,3.71e-10,1;CL:0000810,6.33e-10,1;CL:0000895,6.33e-10,1;CL:0002436,6.33e-10,1;CL:0002427,6.33e-10,1;CL:0002428,6.33e-10,1;CL:0002429,6.33e-10,1;CL:0002433,6.33e-10,1;CL:0002431,6.33e-10,1;CL:0002432,6.33e-10,1;CL:0000988,9.01e-10,177;CL:0000819,9.82e-10,1;CL:0002032,1.81e-09,161;CL:0000837,1.81e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.04e-46;18!CL:0000051;7.03e-23;53!CL:0002425;4.10e-18;2!CL:0002427;6.32e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;6.32e-10;1!DOID:8675;6.32e-10;1!DOID:0060058;1.37e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.82e-10,1;DOID:8675,9.82e-10,1;DOID:0060058,1.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.34e-11!15;UBERON:0000179!5.34e-11!15;UBERON:0000463!5.34e-11!15;UBERON:0004177!1.43e-08!7;UBERON:0002370!7.42e-08!4;UBERON:0005058!7.42e-08!4;UBERON:0009113!7.42e-08!4;UBERON:0003295!7.42e-08!4;UBERON:0005562!7.42e-08!4 | |ontology_enrichment_uberon=UBERON:0000178!5.34e-11!15;UBERON:0000179!5.34e-11!15;UBERON:0000463!5.34e-11!15;UBERON:0004177!1.43e-08!7;UBERON:0002370!7.42e-08!4;UBERON:0005058!7.42e-08!4;UBERON:0009113!7.42e-08!4;UBERON:0003295!7.42e-08!4;UBERON:0005562!7.42e-08!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.22e-09,4;UBERON:0005058,1.22e-09,4;UBERON:0009113,1.22e-09,4;UBERON:0003295,1.22e-09,4;UBERON:0005562,1.22e-09,4 | |||
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| ||
|short_description=p1@BC127818 | |short_description=p1@BC127818 | ||
}} | }} |
Latest revision as of 22:33, 25 July 2015
Short description: | p1@BC127818 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC127818_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 335bp_to_BC127818_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.22e-09 | 4 |
hemolymphoid system gland | 1.22e-09 | 4 |
thymic region | 1.22e-09 | 4 |
pharyngeal gland | 1.22e-09 | 4 |
thymus primordium | 1.22e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.82e-10 | 1 |
lymphosarcoma | 9.82e-10 | 1 |
lymphoma | 1.56e-08 | 10 |