FFCP PHASE1:Hg19::chr19:1030818..1030839,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1030818..1030839,+ | |||
|coexpression_cluster_id=C1370 | |coexpression_cluster_id=C1370 | ||
|description=CAGE_peak_at_chr19:1030818..1030839,+ | |description=CAGE_peak_at_chr19:1030818..1030839,+ | ||
|id=chr19:1030818..1030839,+ | |id=chr19:1030818..1030839,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.62e-33!18;CL:0000789!3.62e-33!18;CL:0002420!3.62e-33!18;CL:0002419!3.62e-33!18;CL:0000790!3.62e-33!18;CL:0000084!1.84e-25!25;CL:0000827!1.84e-25!25;CL:0000625!4.27e-24!11;CL:0002087!5.27e-15!119;CL:0000738!6.38e-14!140;CL:0000838!1.43e-13!52;CL:0000542!3.36e-13!53;CL:0000051!3.36e-13!53;CL:0000624!5.86e-13!6;CL:0002031!4.75e-11!124;CL:0000037!2.34e-09!172;CL:0000566!2.34e-09!172;CL:0000988!2.72e-08!182;CL:0002032!5.22e-08!165;CL:0000837!5.22e-08!165;CL:0000842!1.89e-07!3;CL:0000623!2.71e-07!3;CL:0000825!2.71e-07!3;CL:0000898!3.78e-07!3;CL:0000767!5.84e-07!3 | |ontology_enrichment_celltype=CL:0000791!3.62e-33!18;CL:0000789!3.62e-33!18;CL:0002420!3.62e-33!18;CL:0002419!3.62e-33!18;CL:0000790!3.62e-33!18;CL:0000084!1.84e-25!25;CL:0000827!1.84e-25!25;CL:0000625!4.27e-24!11;CL:0002087!5.27e-15!119;CL:0000738!6.38e-14!140;CL:0000838!1.43e-13!52;CL:0000542!3.36e-13!53;CL:0000051!3.36e-13!53;CL:0000624!5.86e-13!6;CL:0002031!4.75e-11!124;CL:0000037!2.34e-09!172;CL:0000566!2.34e-09!172;CL:0000988!2.72e-08!182;CL:0002032!5.22e-08!165;CL:0000837!5.22e-08!165;CL:0000842!1.89e-07!3;CL:0000623!2.71e-07!3;CL:0000825!2.71e-07!3;CL:0000898!3.78e-07!3;CL:0000767!5.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-53;18!CL:0000789;1.94e-53;18!CL:0002419;1.94e-53;18!CL:0000625;3.69e-48;11!CL:0000084;5.19e-43;25!CL:0000542;2.69e-13;53!CL:0000624;3.30e-12;6!CL:0000226;3.61e-07;3!CL:0000842;3.61e-07;3!CL:0000623;9.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.58e-53,18;CL:0000789,1.58e-53,18;CL:0002420,1.58e-53,18;CL:0002419,1.58e-53,18;CL:0000790,1.58e-53,18;CL:0000625,2.47e-48,11;CL:0000084,4.46e-43,25;CL:0000827,4.46e-43,25;CL:0000838,4.76e-24,52;CL:0000542,1.63e-23,53;CL:0000051,1.63e-23,53;CL:0002087,5.39e-15,115;CL:0000738,3.73e-13,136;CL:0000624,3.66e-12,6;CL:0002031,2.45e-11,120;CL:0000037,1.26e-09,168;CL:0000988,7.22e-09,177;CL:0002032,3.41e-08,161;CL:0000837,3.41e-08,161;CL:0000226,3.84e-07,3;CL:0000842,3.84e-07,3;CL:0000623,7.60e-07,3;CL:0000825,7.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-53;18!CL:0000051;2.69e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.85e-19!15;UBERON:0000179!2.85e-19!15;UBERON:0000463!2.85e-19!15;UBERON:0002193!1.10e-09!112;UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0007023!1.54e-08!115 | |ontology_enrichment_uberon=UBERON:0000178!2.85e-19!15;UBERON:0000179!2.85e-19!15;UBERON:0000463!2.85e-19!15;UBERON:0002193!1.10e-09!112;UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0007023!1.54e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-33;15!UBERON:0000179;1.53e-33;15!UBERON:0000463;1.53e-33;15!UBERON:0002390;1.01e-13;32!UBERON:0002193;2.75e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.35e-33,15;UBERON:0000179,1.35e-33,15;UBERON:0000463,1.35e-33,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.512321413058201,0,0,1.29096936716765,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.16380747125216,1.57204305099666,7.19605246498282,0,0.977766799900771,0.946895611469467,0,0.891283655081389,0.589211814949674,2.21533894583621,1.35401931882508,1.66518715643378,0.910415432919148,0.164437904603676,0,0.289803085735052,3.11401782640327,3.47803076516627,1.04535523804977,1.92625882585863,7.2811893784365,17.5249997196141,13.4100436770337,4.14135038621326,4.55758417699493,3.8018081777935,3.61380285786655,4.99147783502232,3.74792179657038,7.34009481336452,1.64225599384209,7.66105624253983,7.2208852861547,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,4.72873824484625,1.94064817373566,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,0.647142602455851,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,2.29391162142713,2.84823593587081,3.33524485640905,3.29089818468955,1.94541993357815,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,1.61119057208048,0,0,4.7896618469388,0,0,0,0,0.520855522170466,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,12.2631957834884,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,3.84167259326905,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.929195074296532,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.193766729508018,0,0,0,0.202117188958219,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.512321413058201,0,0,1.29096936716765,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.16380747125216,1.57204305099666,7.19605246498282,0,0.977766799900771,0.946895611469467,0,0.891283655081389,0.589211814949674,2.21533894583621,1.35401931882508,1.66518715643378,0.910415432919148,0.164437904603676,0,0.289803085735052,3.11401782640327,3.47803076516627,1.04535523804977,1.92625882585863,7.2811893784365,17.5249997196141,13.4100436770337,4.14135038621326,4.55758417699493,3.8018081777935,3.61380285786655,4.99147783502232,3.74792179657038,7.34009481336452,1.64225599384209,7.66105624253983,7.2208852861547,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,4.72873824484625,1.94064817373566,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,0.647142602455851,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,2.29391162142713,2.84823593587081,3.33524485640905,3.29089818468955,1.94541993357815,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,1.61119057208048,0,0,4.7896618469388,0,0,0,0,0.520855522170466,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,12.2631957834884,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,3.84167259326905,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.929195074296532,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.193766729508018,0,0,0,0.202117188958219,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p@chr19:1030818..1030839,+ | |short_description=p@chr19:1030818..1030839,+ | ||
}} | }} |
Latest revision as of 02:50, 26 July 2015
Short description: | p@chr19:1030818..1030839, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1030818..1030839, + |
Coexpression cluster: | C1370_CD8_CD4_Natural_Peripheral_Whole_Basophils_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.58e-53 | 18 |
alpha-beta T cell | 1.58e-53 | 18 |
immature T cell | 1.58e-53 | 18 |
mature T cell | 1.58e-53 | 18 |
immature alpha-beta T cell | 1.58e-53 | 18 |
CD8-positive, alpha-beta T cell | 2.47e-48 | 11 |
T cell | 4.46e-43 | 25 |
pro-T cell | 4.46e-43 | 25 |
lymphoid lineage restricted progenitor cell | 4.76e-24 | 52 |
lymphocyte | 1.63e-23 | 53 |
common lymphoid progenitor | 1.63e-23 | 53 |
nongranular leukocyte | 5.39e-15 | 115 |
leukocyte | 3.73e-13 | 136 |
CD4-positive, alpha-beta T cell | 3.66e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 2.45e-11 | 120 |
hematopoietic stem cell | 1.26e-09 | 168 |
hematopoietic cell | 7.22e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.41e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-08 | 161 |
single nucleate cell | 3.84e-07 | 3 |
mononuclear cell | 3.84e-07 | 3 |
natural killer cell | 7.60e-07 | 3 |
pro-NK cell | 7.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.35e-33 | 15 |
haemolymphatic fluid | 1.35e-33 | 15 |
organism substance | 1.35e-33 | 15 |