FFCP PHASE1:Hg19::chr19:14224969..14225011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5566 | |EntrezGene=5566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |HGNC=9380 | ||
|TSSclassifier=strong | |||
|UniProt=P17612 | |UniProt=P17612 | ||
|association_with_transcript=0bp_to_ENST00000350356,NM_207518,uc002myb.2_5end | |association_with_transcript=0bp_to_ENST00000350356,NM_207518,uc002myb.2_5end | ||
|cluster_id=chr19:14224969..14225011,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_PRKACA_5end | |description=CAGE_peak_4_at_PRKACA_5end | ||
|id=chr19:14224969..14225011,- | |id=chr19:14224969..14225011,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.12e-11,108;CL:0000049,6.12e-11,108 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.33e-07;10!UBERON:0005564;9.33e-07;10 | |||
|ontology_enrichment_disease=DOID:8692!2.28e-23!31;DOID:1240!2.51e-21!39;DOID:2531!5.58e-18!51;DOID:0060083!5.58e-18!51;DOID:0050686!4.07e-08!137;DOID:1036!6.98e-07!8 | |ontology_enrichment_disease=DOID:8692!2.28e-23!31;DOID:1240!2.51e-21!39;DOID:2531!5.58e-18!51;DOID:0060083!5.58e-18!51;DOID:0050686!4.07e-08!137;DOID:1036!6.98e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.14e-50;31!DOID:1240;7.64e-33;39!DOID:2531;4.60e-22;51!DOID:0060083;4.60e-22;51!DOID:1036;3.18e-12;8!DOID:1909;6.84e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.54e-51,31;DOID:1240,7.29e-40,39;DOID:2531,3.24e-32,51;DOID:0060083,3.24e-32,51;DOID:0050686,4.96e-13,137;DOID:1036,2.69e-12,8;DOID:162,2.43e-11,235;DOID:14566,6.07e-11,239;DOID:1909,4.99e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.70e-09!115;UBERON:0001049!1.42e-07!57;UBERON:0005068!1.42e-07!57;UBERON:0006241!1.42e-07!57;UBERON:0007135!1.42e-07!57;UBERON:0002780!2.93e-07!41;UBERON:0001890!2.93e-07!41;UBERON:0006240!2.93e-07!41;UBERON:0003080!6.30e-07!42;UBERON:0003075!7.53e-07!86;UBERON:0007284!7.53e-07!86;UBERON:0002020!8.37e-07!34;UBERON:0003528!8.37e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!7.70e-09!115;UBERON:0001049!1.42e-07!57;UBERON:0005068!1.42e-07!57;UBERON:0006241!1.42e-07!57;UBERON:0007135!1.42e-07!57;UBERON:0002780!2.93e-07!41;UBERON:0001890!2.93e-07!41;UBERON:0006240!2.93e-07!41;UBERON:0003080!6.30e-07!42;UBERON:0003075!7.53e-07!86;UBERON:0007284!7.53e-07!86;UBERON:0002020!8.37e-07!34;UBERON:0003528!8.37e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.89e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.75e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.492603536699674,0.314843125254717,0,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,25.2789615710585,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.932949495138334,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0.290633938513962,0,0.985326475791887,0.176096868026452,0,0,0,0.952468414382536,0.381988425558278,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,1.03041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.537101224341368,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.808729926293264,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,4.27296284509893,0,0,0.185803175125719,0,0.0711418433484141,0.797131363644112,7.78359548587985,4.40462351304443,10.795352718918,8.764792387413,1.68478306868075,1.14117339516596,18.1748679096707,0,11.511840890509,0.321176150207399,0.201799707191048,0,0.343505344755765,1.22896305723383,0.894704431569664,1.16794399198336,0,1.67043704337145,4.92349595790849,5.95002492647163,7.99372723194768,22.5579208140559,0,0,0.485442086998054,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.492339221844278,0.311039587661807,0,0,1.53471711068062,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0.520874984799877,0,0.60298219312704,1.52581736317083,0,0,0,0.21787692703798,0,0,0,7.37804494041792,0.0897576444097721,0.108647371922008,0,0,0,0,8.16297333254129,0.332423363800313,2.48155226678899,4.50943828930801,2.3495022176618,0.75901493089674,1.74830236878417,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,1.64209310294099,0.391329237864179,0,0,0,0,0,0.450970258243478,0.518440956986236,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0.52418000472609,0,0.19351266257817,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0,0,8.64542502924636,2.06165873098648,0,0,0,1.64985824231757,0,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0.599037001496973,0,0,0.134366944973453,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,4.9827759450548,0,0.517131825446202,0.52893040697076,0.513260513652988,0,0,0.157204305099666,0,0,2.96417447846916,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0.620964029413834,0,0.124980407962107,8.49235058233228,1.7127920012698,0,0,0,0.447764408660622,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0.389720617678777,0.531459361253452,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0,0.622415272177961,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,2.21784129325568,0.0675375846183947,1.56215619722769,0.413373593002368,0.317079050969534,0,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0.316027223465453,8.36938262650502,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,1.58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| ||
|short_description=p4@PRKACA | |short_description=p4@PRKACA | ||
}} | }} |
Latest revision as of 03:47, 16 September 2015
Short description: | p4@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKACA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000350356, NM_207518, uc002myb.2_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | P17612 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.12e-11 | 108 |
common myeloid progenitor | 6.12e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
testis | 1.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.54e-51 | 31 |
leukemia | 7.29e-40 | 39 |
hematologic cancer | 3.24e-32 | 51 |
immune system cancer | 3.24e-32 | 51 |
organ system cancer | 4.96e-13 | 137 |
chronic leukemia | 2.69e-12 | 8 |
cancer | 2.43e-11 | 235 |
disease of cellular proliferation | 6.07e-11 | 239 |
melanoma | 4.99e-09 | 2 |