FFCP PHASE1:Hg19::chr18:77557932..77557943,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:77557932..77557943,+
|short_description=p@chr18:77557932..77557943,+
|description=CAGE_peak_at_chr18:77557932..77557943,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:77557932..77557943,+ | |||
|coexpression_cluster_id=C3742 | |||
|description=CAGE_peak_at_chr18:77557932..77557943,+ | |||
|id=chr18:77557932..77557943,+ | |||
|ontology_enrichment_celltype=CL:0000784!5.41e-08!3;CL:0002504!2.86e-07!3;CL:1000279!2.86e-07!3;CL:1000280!2.86e-07!3;CL:0002622!7.46e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.74e-47;3!CL:0000123;5.50e-31;2!CL:0000242;5.50e-31;2!CL:0002504;3.45e-21;3!CL:1000279;3.45e-21;3!CL:1000280;3.45e-21;3!CL:0002032;5.98e-17;1!CL:0000557;5.98e-17;1!CL:0002599;9.57e-17;1!CL:0000511;2.08e-16;1!CL:0002625;2.08e-16;1!CL:0000037;2.08e-16;1!CL:0001024;2.08e-16;1!CL:0000216;2.08e-16;1!CL:0000451;2.16e-13;10!CL:0000312;4.96e-13;5!CL:0000240;5.09e-11;6!CL:0000311;5.09e-11;6!CL:0000079;5.09e-11;6!CL:0000237;5.09e-11;6!CL:0002195;7.21e-09;2!CL:0002571;7.21e-09;2!CL:0000362;1.20e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.46e-47,3;CL:0000242,5.50e-31,2;CL:0002504,2.67e-21,3;CL:1000279,2.67e-21,3;CL:1000280,2.67e-21,3;CL:0002599,8.86e-17,1;CL:0000511,1.65e-16,1;CL:0002625,1.65e-16,1;CL:0000216,1.65e-16,1;CL:0001024,2.63e-16,1;CL:0000451,2.11e-13,10;CL:0000312,4.96e-13,5;CL:0000240,5.09e-11,6;CL:0000311,5.09e-11,6;CL:0000079,5.09e-11,6;CL:0000237,5.09e-11,6;CL:0000036,5.09e-11,6;CL:0000357,5.09e-11,6;CL:0000114,5.09e-11,6;CL:0002195,8.74e-09,2;CL:0002571,8.74e-09,2;CL:0000362,1.20e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;5.09e-11;6!CL:0000114;5.09e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.44e-13!115;UBERON:0002616!3.87e-12!59;UBERON:0005743!1.17e-11!86;UBERON:0000073!1.30e-11!94;UBERON:0001016!1.30e-11!94;UBERON:0001893!2.32e-11!34;UBERON:0001869!6.89e-11!32;UBERON:0001017!1.87e-10!82;UBERON:0002791!2.31e-10!33;UBERON:0000955!2.38e-10!69;UBERON:0006238!2.38e-10!69;UBERON:0002780!3.92e-10!41;UBERON:0001890!3.92e-10!41;UBERON:0006240!3.92e-10!41;UBERON:0002020!4.92e-10!34;UBERON:0003528!4.92e-10!34;UBERON:0001049!5.25e-10!57;UBERON:0005068!5.25e-10!57;UBERON:0006241!5.25e-10!57;UBERON:0007135!5.25e-10!57;UBERON:0003080!8.59e-10!42;UBERON:0002619!1.36e-09!22;UBERON:0003056!3.90e-09!61;UBERON:0001950!8.30e-09!20;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000956!3.63e-08!25;UBERON:0000203!3.63e-08!25;UBERON:0002346!5.50e-08!90;UBERON:0000153!8.95e-08!129;UBERON:0007811!8.95e-08!129;UBERON:0005284!1.78e-07!5;UBERON:0000033!2.94e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.08e-16;1!UBERON:0001343;2.08e-16;1!UBERON:0004910;2.08e-16;1!UBERON:0004813;2.08e-16;1!UBERON:0004909;7.21e-09;2!UBERON:0001155;1.07e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.65e-16,1;UBERON:0001343,1.65e-16,1;UBERON:0004910,1.65e-16,1;UBERON:0005154,1.65e-16,1;UBERON:0005295,1.65e-16,1;UBERON:0004813,1.65e-16,1;UBERON:0005297,1.65e-16,1;UBERON:0005294,1.65e-16,1;UBERON:0010141,1.65e-16,1;UBERON:0005891,1.65e-16,1;UBERON:0004909,6.42e-09,2;UBERON:0001155,9.85e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.863077176966451,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,15.2633999555419,5.14795419702115,11.8866400425461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,1.00084595560703,0,0,0,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,1.64722217841633,2.00281083987667,0,0,0,3.90106991271672,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.94007937463814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4971929260275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,1.40500471742064,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.918736432059601,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.863077176966451,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,15.2633999555419,5.14795419702115,11.8866400425461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,1.00084595560703,0,0,0,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,1.64722217841633,2.00281083987667,0,0,0,3.90106991271672,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.94007937463814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4971929260275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,1.40500471742064,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.918736432059601,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr18:77557932..77557943,+ | |||
}} | }} |
Latest revision as of 02:30, 26 July 2015
Short description: | p@chr18:77557932..77557943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:77557932..77557943, + |
Coexpression cluster: | C3742_Dendritic_granulocyte_Smooth_Mesenchymal_Fibroblast_merkel_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.46e-47 | 3 |
Merkel cell | 5.50e-31 | 2 |
enteric smooth muscle cell | 2.67e-21 | 3 |
smooth muscle cell of large intestine | 2.67e-21 | 3 |
smooth muscle cell of colon | 2.67e-21 | 3 |
smooth muscle cell of the esophagus | 8.86e-17 | 1 |
androgen binding protein secreting cell | 1.65e-16 | 1 |
seminiferous tubule epithelial cell | 1.65e-16 | 1 |
Sertoli cell | 1.65e-16 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.63e-16 | 1 |
dendritic cell | 2.11e-13 | 10 |
keratinocyte | 4.96e-13 | 5 |
stratified squamous epithelial cell | 5.09e-11 | 6 |
keratin accumulating cell | 5.09e-11 | 6 |
stratified epithelial cell | 5.09e-11 | 6 |
keratinizing barrier epithelial cell | 5.09e-11 | 6 |
epithelial fate stem cell | 5.09e-11 | 6 |
stratified epithelial stem cell | 5.09e-11 | 6 |
surface ectodermal cell | 5.09e-11 | 6 |
hepatic stem cell | 8.74e-09 | 2 |
hepatic mesenchymal stem cell | 8.74e-09 | 2 |
epidermal cell | 1.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.65e-16 | 1 |
seminiferous tubule of testis | 1.65e-16 | 1 |
epithelium of male gonad | 1.65e-16 | 1 |
epithelial cord | 1.65e-16 | 1 |
sex cord | 1.65e-16 | 1 |
seminiferous tubule epithelium | 1.65e-16 | 1 |
testis sex cord | 1.65e-16 | 1 |
genital ridge | 1.65e-16 | 1 |
primitive sex cord of indifferent gonad | 1.65e-16 | 1 |
coelomic epithelium | 1.65e-16 | 1 |
epithelium of gonad | 6.42e-09 | 2 |
colon | 9.85e-08 | 9 |