FFCP PHASE1:Hg19::chr1:15563067..15563079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:15563067..15563079,+ | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_at_chr1:15563067..15563079,+ | |description=CAGE_peak_at_chr1:15563067..15563079,+ | ||
|id=chr1:15563067..15563079,+ | |id=chr1:15563067..15563079,+ | ||
|ontology_enrichment_celltype=CL:0000080!1.63e-10!6 | |ontology_enrichment_celltype=CL:0000080!1.63e-10!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!4.28e-08!1;DOID:0060085!1.07e-07!1;DOID:3165!1.07e-07!1;DOID:0060121!1.07e-07!1;DOID:2438!1.07e-07!1;DOID:4418!1.07e-07!1 | |ontology_enrichment_disease=DOID:2355!4.28e-08!1;DOID:0060085!1.07e-07!1;DOID:3165!1.07e-07!1;DOID:0060121!1.07e-07!1;DOID:2438!1.07e-07!1;DOID:4418!1.07e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;6.62e-41;1!DOID:74;3.11e-21;2!DOID:1287;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,6.62e-41,1;DOID:74,3.11e-21,2;DOID:1287,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000369!2.17e-14!4;UBERON:0002435!2.17e-14!4;UBERON:0000204!2.17e-14!4;UBERON:0010082!2.17e-14!4;UBERON:0005383!2.87e-09!3;UBERON:0005382!2.87e-09!3;UBERON:0001896!5.57e-09!3;UBERON:0005290!5.57e-09!3;UBERON:0010096!5.57e-09!3;UBERON:0009663!1.93e-08!7;UBERON:0001874!1.22e-07!1;UBERON:0002298!1.75e-07!8;UBERON:0002581!2.80e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0000955!6.12e-07!69;UBERON:0006238!6.12e-07!69 | |ontology_enrichment_uberon=UBERON:0000369!2.17e-14!4;UBERON:0002435!2.17e-14!4;UBERON:0000204!2.17e-14!4;UBERON:0010082!2.17e-14!4;UBERON:0005383!2.87e-09!3;UBERON:0005382!2.87e-09!3;UBERON:0001896!5.57e-09!3;UBERON:0005290!5.57e-09!3;UBERON:0010096!5.57e-09!3;UBERON:0009663!1.93e-08!7;UBERON:0001874!1.22e-07!1;UBERON:0002298!1.75e-07!8;UBERON:0002581!2.80e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0000955!6.12e-07!69;UBERON:0006238!6.12e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.46e-17;10!UBERON:0000178;1.46e-11;15!UBERON:0000179;1.46e-11;15!UBERON:0000463;1.46e-11;15!UBERON:0000478;1.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.81e-17,10;UBERON:0000358,8.81e-17,10;UBERON:0000307,8.81e-17,10;UBERON:0000091,8.81e-17,10;UBERON:0000087,8.81e-17,10;UBERON:0007010,8.81e-17,10;UBERON:0007806,8.81e-17,10;UBERON:0008780,8.81e-17,10;UBERON:0005728,8.81e-17,10;UBERON:0000178,1.50e-11,15;UBERON:0000179,1.50e-11,15;UBERON:0000463,1.50e-11,15;UBERON:0000478,1.36e-07,24 | |||
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|short_description=p@chr1:15563067..15563079,+ | |short_description=p@chr1:15563067..15563079,+ | ||
}} | }} |
Latest revision as of 22:19, 27 July 2015
Short description: | p@chr1:15563067..15563079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:15563067..15563079, + |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.81e-17 | 10 |
blastocyst | 8.81e-17 | 10 |
blastula | 8.81e-17 | 10 |
bilaminar disc | 8.81e-17 | 10 |
inner cell mass | 8.81e-17 | 10 |
cleaving embryo | 8.81e-17 | 10 |
connecting stalk | 8.81e-17 | 10 |
inner cell mass derived epiblast | 8.81e-17 | 10 |
extraembryonic mesoderm | 8.81e-17 | 10 |
blood | 1.50e-11 | 15 |
haemolymphatic fluid | 1.50e-11 | 15 |
organism substance | 1.50e-11 | 15 |
extraembryonic structure | 1.36e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
anemia | 6.62e-41 | 1 |
hematopoietic system disease | 3.11e-21 | 2 |
cardiovascular system disease | 2.53e-11 | 4 |