FFCP PHASE1:Hg19::chr1:192778161..192778180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5997 | |EntrezGene=5997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9998 | |HGNC=9998 | ||
|TSSclassifier=strong | |||
|UniProt=P41220 | |UniProt=P41220 | ||
|association_with_transcript=0bp_to_ENST00000235382,ENST00000464302,ENST00000483295,NM_002923,uc001gsl.2_5end | |association_with_transcript=0bp_to_ENST00000235382,ENST00000464302,ENST00000483295,NM_002923,uc001gsl.2_5end | ||
|cluster_id=chr1:192778161..192778180,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_RGS2_5end | |description=CAGE_peak_1_at_RGS2_5end | ||
|id=chr1:192778161..192778180,+ | |id=chr1:192778161..192778180,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.88e-25!140;CL:0002057!1.60e-24!42;CL:0000860!4.84e-23!45;CL:0000766!2.39e-20!76;CL:0000557!1.59e-16!71;CL:0002031!1.84e-16!124;CL:0002087!2.30e-15!119;CL:0000839!5.92e-15!70;CL:0002009!1.32e-14!65;CL:0002194!1.62e-13!63;CL:0000576!1.62e-13!63;CL:0000040!1.62e-13!63;CL:0000559!1.62e-13!63;CL:0000037!6.48e-13!172;CL:0000566!6.48e-13!172;CL:0002032!5.70e-11!165;CL:0000837!5.70e-11!165;CL:0000988!1.77e-09!182;CL:0000763!1.01e-08!112;CL:0000049!1.01e-08!112;CL:0002393!9.17e-07!9;CL:0002397!9.17e-07!9 | |ontology_enrichment_celltype=CL:0000738!6.88e-25!140;CL:0002057!1.60e-24!42;CL:0000860!4.84e-23!45;CL:0000766!2.39e-20!76;CL:0000557!1.59e-16!71;CL:0002031!1.84e-16!124;CL:0002087!2.30e-15!119;CL:0000839!5.92e-15!70;CL:0002009!1.32e-14!65;CL:0002194!1.62e-13!63;CL:0000576!1.62e-13!63;CL:0000040!1.62e-13!63;CL:0000559!1.62e-13!63;CL:0000037!6.48e-13!172;CL:0000566!6.48e-13!172;CL:0002032!5.70e-11!165;CL:0000837!5.70e-11!165;CL:0000988!1.77e-09!182;CL:0000763!1.01e-08!112;CL:0000049!1.01e-08!112;CL:0002393!9.17e-07!9;CL:0002397!9.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-17;33!CL:0002057;1.43e-17;33!CL:0000473;1.44e-12;39!CL:0000234;1.44e-12;39!CL:0000576;2.73e-12;48!CL:0000766;7.11e-11;69!CL:0002087;7.94e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.05e-25,136;CL:0000860,1.58e-24,42;CL:0002057,1.58e-24,42;CL:0000473,1.56e-21,48;CL:0000234,1.56e-21,48;CL:0000766,1.79e-21,72;CL:0000557,1.67e-17,67;CL:0002031,4.28e-17,120;CL:0002087,5.53e-16,115;CL:0000839,7.45e-16,66;CL:0002009,1.49e-15,61;CL:0002194,2.03e-14,59;CL:0000576,2.03e-14,59;CL:0000040,2.03e-14,59;CL:0000559,2.03e-14,59;CL:0000037,2.83e-13,168;CL:0002032,2.70e-11,161;CL:0000837,2.70e-11,161;CL:0000988,4.04e-10,177;CL:0000763,4.88e-09,108;CL:0000049,4.88e-09,108;CL:0002393,9.15e-07,9;CL:0002397,9.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.01e-19!102;UBERON:0003061!8.01e-19!102;UBERON:0007023!8.36e-17!115;UBERON:0002193!2.07e-14!112;UBERON:0002371!9.27e-14!80;UBERON:0001474!2.91e-13!86;UBERON:0004765!5.24e-10!101;UBERON:0001434!5.24e-10!101;UBERON:0002204!6.72e-08!167;UBERON:0003081!2.65e-07!216;UBERON:0002405!6.66e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!8.01e-19!102;UBERON:0003061!8.01e-19!102;UBERON:0007023!8.36e-17!115;UBERON:0002193!2.07e-14!112;UBERON:0002371!9.27e-14!80;UBERON:0001474!2.91e-13!86;UBERON:0004765!5.24e-10!101;UBERON:0001434!5.24e-10!101;UBERON:0002204!6.72e-08!167;UBERON:0003081!2.65e-07!216;UBERON:0002405!6.66e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-19,98;UBERON:0003061,1.23e-19,98;UBERON:0007023,1.11e-16,114;UBERON:0002193,5.55e-15,108;UBERON:0002371,1.59e-14,76;UBERON:0001474,5.96e-14,82;UBERON:0004765,6.91e-13,90;UBERON:0002405,1.29e-10,93;UBERON:0001434,3.95e-10,100;UBERON:0003081,7.12e-10,203;UBERON:0002204,6.22e-08,167;UBERON:0000926,3.05e-07,315;UBERON:0004120,3.05e-07,315;UBERON:0006603,3.05e-07,315 | |||
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| ||
|short_description=p1@RGS2 | |short_description=p1@RGS2 | ||
}} | }} |
Latest revision as of 10:32, 19 September 2015
Short description: | p1@RGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000235382, ENST00000464302, ENST00000483295, NM_002923, uc001gsl.2_5end |
EntrezGene: | RGS2 |
HGNC: | 9998 |
UniProt: | P41220 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.05e-25 | 136 |
classical monocyte | 1.58e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-24 | 42 |
defensive cell | 1.56e-21 | 48 |
phagocyte | 1.56e-21 | 48 |
myeloid leukocyte | 1.79e-21 | 72 |
granulocyte monocyte progenitor cell | 1.67e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 4.28e-17 | 120 |
nongranular leukocyte | 5.53e-16 | 115 |
myeloid lineage restricted progenitor cell | 7.45e-16 | 66 |
macrophage dendritic cell progenitor | 1.49e-15 | 61 |
monopoietic cell | 2.03e-14 | 59 |
monocyte | 2.03e-14 | 59 |
monoblast | 2.03e-14 | 59 |
promonocyte | 2.03e-14 | 59 |
hematopoietic stem cell | 2.83e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-11 | 161 |
hematopoietic cell | 4.04e-10 | 177 |
myeloid cell | 4.88e-09 | 108 |
common myeloid progenitor | 4.88e-09 | 108 |
intermediate monocyte | 9.15e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-19 | 98 |
blood island | 1.23e-19 | 98 |
adult organism | 1.11e-16 | 114 |
hemolymphoid system | 5.55e-15 | 108 |
bone marrow | 1.59e-14 | 76 |
bone element | 5.96e-14 | 82 |
skeletal element | 6.91e-13 | 90 |
immune system | 1.29e-10 | 93 |
skeletal system | 3.95e-10 | 100 |
lateral plate mesoderm | 7.12e-10 | 203 |
musculoskeletal system | 6.22e-08 | 167 |
mesoderm | 3.05e-07 | 315 |
mesoderm-derived structure | 3.05e-07 | 315 |
presumptive mesoderm | 3.05e-07 | 315 |