FFCP PHASE1:Hg19::chr1:207504564..207504579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207504564..207504579,+ | |||
|coexpression_cluster_id=C531 | |coexpression_cluster_id=C531 | ||
|description=CAGE_peak_at_chr1:207504564..207504579,+ | |description=CAGE_peak_at_chr1:207504564..207504579,+ | ||
|id=chr1:207504564..207504579,+ | |id=chr1:207504564..207504579,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.94e-22!45;CL:0002057!2.62e-20!42;CL:0000766!4.27e-16!76;CL:0000557!1.57e-13!71;CL:0000738!3.17e-13!140;CL:0000839!8.17e-13!70;CL:0002009!1.02e-12!65;CL:0000763!3.86e-12!112;CL:0000049!3.86e-12!112;CL:0002194!1.05e-11!63;CL:0000576!1.05e-11!63;CL:0000040!1.05e-11!63;CL:0000559!1.05e-11!63;CL:0002032!3.84e-10!165;CL:0000837!3.84e-10!165;CL:0002031!6.37e-10!124;CL:0000037!9.33e-10!172;CL:0000566!9.33e-10!172;CL:0000988!5.08e-09!182;CL:0002087!6.62e-09!119 | |ontology_enrichment_celltype=CL:0000860!1.94e-22!45;CL:0002057!2.62e-20!42;CL:0000766!4.27e-16!76;CL:0000557!1.57e-13!71;CL:0000738!3.17e-13!140;CL:0000839!8.17e-13!70;CL:0002009!1.02e-12!65;CL:0000763!3.86e-12!112;CL:0000049!3.86e-12!112;CL:0002194!1.05e-11!63;CL:0000576!1.05e-11!63;CL:0000040!1.05e-11!63;CL:0000559!1.05e-11!63;CL:0002032!3.84e-10!165;CL:0000837!3.84e-10!165;CL:0002031!6.37e-10!124;CL:0000037!9.33e-10!172;CL:0000566!9.33e-10!172;CL:0000988!5.08e-09!182;CL:0002087!6.62e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-41;33!CL:0002057;2.68e-41;33!CL:0000473;2.94e-29;39!CL:0000234;2.94e-29;39!CL:0000576;6.38e-21;48!CL:0000766;3.04e-15;69!CL:0000775;3.89e-09;3!CL:0000094;1.94e-08;8!CL:0000763;2.72e-08;100!CL:0002087;3.62e-08;104!CL:0000081;3.83e-08;11!CL:0000738;2.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-40,42;CL:0002057,3.41e-40,42;CL:0000473,8.03e-37,48;CL:0000234,8.03e-37,48;CL:0000766,1.79e-31,72;CL:0002009,9.95e-31,61;CL:0002194,9.97e-28,59;CL:0000576,9.97e-28,59;CL:0000040,9.97e-28,59;CL:0000559,9.97e-28,59;CL:0000557,3.26e-27,67;CL:0000839,6.06e-24,66;CL:0000738,1.88e-21,136;CL:0000763,1.86e-20,108;CL:0000049,1.86e-20,108;CL:0002031,2.06e-18,120;CL:0002087,3.71e-17,115;CL:0002032,2.26e-16,161;CL:0000837,2.26e-16,161;CL:0000037,3.14e-15,168;CL:0000988,8.29e-15,177;CL:0000775,4.02e-09,3;CL:0000094,1.81e-08,8;CL:0000081,3.36e-08,11;CL:0000134,2.81e-07,354;CL:0002320,6.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.32e-30;42!UBERON:0008947;2.60e-09;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.62e-10!80;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0001474!1.42e-08!86;UBERON:0002193!9.37e-08!112;UBERON:0001737!1.34e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!7.62e-10!80;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0001474!1.42e-08!86;UBERON:0002193!9.37e-08!112;UBERON:0001737!1.34e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.92e-16;9!UBERON:0001557;9.92e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.54e-23,76;UBERON:0001474,1.11e-20,82;UBERON:0004765,4.26e-18,90;UBERON:0002405,3.03e-17,93;UBERON:0002390,3.41e-17,98;UBERON:0003061,3.41e-17,98;UBERON:0001434,1.16e-16,100;UBERON:0001737,2.76e-16,9;UBERON:0002193,8.15e-15,108;UBERON:0002204,2.12e-07,167;UBERON:0001557,6.05e-07,19;UBERON:0003081,6.10e-07,203 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,0.464448369948228,0,0,0,0.232401601740905,0,0,0.553995408531877,1.40381113229099,2.17010870715852,0.223915474239924,0,0,1.74477886535478,0.377875943688809,0.727752183563449,2.32429036905685,0.822335776043652,2.78735733805593,2.3015391385772,1.5369642391746,2.12834006899727,3.10271112662957,1.29096936716765,2.70852973188684,2.82363509313907,2.18324920046277,2.02251136000576,8.26426509401437,2.56743221660875,5.11469700639233,0.989553900560148,1.19678194572979,0,9.86711411337186,8.5107783703671,8.71951148593805,3.01498398308092,4.69334626578181,1.3031330682307,4.23779651843358,4.05105399586321,4.43047342417238,0.422510572623884,0,0.209658645508376,0.786300418025466,0.300353785683013,1.92870704036496,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,2.84606484554724,5.87237189370939,4.20500550937752,0,0,0,0.983548850569165,1.17903228824749,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0,0,0.443067789167242,0,0.25618263945135,0.260118695119756,0,0,0,0.889719378972363,0,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0,0,2.31719046212478,0,0,0,1.0843174571537,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0.860509862246441,0,0.560677600142307,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,1.28648187638577,0,0,0,1.65629520055781,3.70886318171824,1.92808823906786,2.31617342738027,1.74303555273925,0.949082476444386,1.34831308160164,1.96221465125346,3.07797725557112,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0,0,0.985326475791887,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0,2.05348858047597,0,0,0,0,0,4.49404214368309,26.9245313283622,4.14415513436035,0,0,0,0,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0.30239029332968,1.24053903909388,0.153461973288062,0.561320188866147,0.512556597022804,0,1.60853921143608,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0.644566922551274,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0.371606350251437,0,0.0711418433484141,0,0.399158742865633,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0.284136146806413,1.90995587790152,0.296964680832639,3.37876772309155,0,0.422008249231538,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0.394573622547734,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0,0,0.455768223388005,0.922255617552241,0.807818799687949,2.28159481036217,0.31900115973192,0.366390373607449,4.26427820814908,0,0.627921025580099,0.166211681900156,0.225595660617181,0,0.503464760927528,0,0.317873157960757,0,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,1.48260564340311,0.370691816839509,0.522109747527277,0.134802265961354,0,0,0.547364367646998,0.586993856796269,0,0.394584402849391,1.20990716048664,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0.520679215005393,0.0979923974143777,0.0870592065804026,0.174726668242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| ||
|short_description=p@chr1:207504564..207504579,+ | |short_description=p@chr1:207504564..207504579,+ | ||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207504564..207504579, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207504564..207504579, + |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.41e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-40 | 42 |
defensive cell | 8.03e-37 | 48 |
phagocyte | 8.03e-37 | 48 |
myeloid leukocyte | 1.79e-31 | 72 |
macrophage dendritic cell progenitor | 9.95e-31 | 61 |
monopoietic cell | 9.97e-28 | 59 |
monocyte | 9.97e-28 | 59 |
monoblast | 9.97e-28 | 59 |
promonocyte | 9.97e-28 | 59 |
granulocyte monocyte progenitor cell | 3.26e-27 | 67 |
myeloid lineage restricted progenitor cell | 6.06e-24 | 66 |
leukocyte | 1.88e-21 | 136 |
myeloid cell | 1.86e-20 | 108 |
common myeloid progenitor | 1.86e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 2.06e-18 | 120 |
nongranular leukocyte | 3.71e-17 | 115 |
hematopoietic oligopotent progenitor cell | 2.26e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.26e-16 | 161 |
hematopoietic stem cell | 3.14e-15 | 168 |
hematopoietic cell | 8.29e-15 | 177 |
neutrophil | 4.02e-09 | 3 |
granulocyte | 1.81e-08 | 8 |
blood cell | 3.36e-08 | 11 |
mesenchymal cell | 2.81e-07 | 354 |
connective tissue cell | 6.72e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.54e-23 | 76 |
bone element | 1.11e-20 | 82 |
skeletal element | 4.26e-18 | 90 |
immune system | 3.03e-17 | 93 |
hematopoietic system | 3.41e-17 | 98 |
blood island | 3.41e-17 | 98 |
skeletal system | 1.16e-16 | 100 |
larynx | 2.76e-16 | 9 |
hemolymphoid system | 8.15e-15 | 108 |
musculoskeletal system | 2.12e-07 | 167 |
upper respiratory tract | 6.05e-07 | 19 |
lateral plate mesoderm | 6.10e-07 | 203 |