FFCP PHASE1:Hg19::chr19:12992212..12992237,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:12992212..12992237,-
|short_description=p3@DNASE2
|description=CAGE_peak_3_at_DNASE2_5end
|association_with_transcript=25bp_to_ENST00000538460_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1777 | |EntrezGene=1777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2960 | |HGNC=2960 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4K6 | |UniProt=B7Z4K6 | ||
|association_with_transcript=25bp_to_ENST00000538460_5end | |||
|cluster_id=chr19:12992212..12992237,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_3_at_DNASE2_5end | |||
|id=chr19:12992212..12992237,- | |||
|ontology_enrichment_celltype=CL:0002194!4.35e-34!63;CL:0000576!4.35e-34!63;CL:0000040!4.35e-34!63;CL:0000559!4.35e-34!63;CL:0002009!6.96e-34!65;CL:0000766!1.89e-31!76;CL:0000557!5.22e-28!71;CL:0000860!5.67e-27!45;CL:0002057!8.01e-27!42;CL:0000839!1.56e-26!70;CL:0000738!2.11e-21!140;CL:0002087!1.93e-19!119;CL:0000763!5.07e-17!112;CL:0000049!5.07e-17!112;CL:0002031!9.56e-15!124;CL:0000037!1.99e-12!172;CL:0000566!1.99e-12!172;CL:0002032!2.23e-11!165;CL:0000837!2.23e-11!165;CL:0000988!3.40e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.73e-23;39!CL:0000234;5.73e-23;39!CL:0000860;7.21e-23;33!CL:0002057;7.21e-23;33!CL:0000576;2.00e-22;48!CL:0000766;1.18e-15;69!CL:0002087;1.22e-07;104!CL:0000738;6.52e-07;136!CL:0000763;6.93e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.53e-39,59;CL:0000576,1.53e-39,59;CL:0000040,1.53e-39,59;CL:0000559,1.53e-39,59;CL:0002009,3.04e-39,61;CL:0000766,2.65e-37,72;CL:0000473,4.24e-35,48;CL:0000234,4.24e-35,48;CL:0000557,2.70e-33,67;CL:0000839,1.25e-31,66;CL:0000860,1.92e-30,42;CL:0002057,1.92e-30,42;CL:0000738,7.54e-27,136;CL:0002087,4.75e-24,115;CL:0000763,2.45e-21,108;CL:0000049,2.45e-21,108;CL:0002031,5.52e-19,120;CL:0000037,8.38e-17,168;CL:0002032,1.32e-15,161;CL:0000837,1.32e-15,161;CL:0000988,1.78e-14,177;CL:0002393,4.98e-07,9;CL:0002397,4.98e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.96e-22;42!CL:0000049;1.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.16e-22!80;UBERON:0002390!5.32e-22!102;UBERON:0003061!5.32e-22!102;UBERON:0001474!9.62e-21!86;UBERON:0002193!6.57e-19!112;UBERON:0002405!4.79e-17!115;UBERON:0004765!4.34e-15!101;UBERON:0001434!4.34e-15!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.66e-27,76;UBERON:0002390,1.68e-26,98;UBERON:0003061,1.68e-26,98;UBERON:0001474,1.08e-24,82;UBERON:0002405,1.15e-22,93;UBERON:0002193,1.24e-22,108;UBERON:0004765,9.85e-21,90;UBERON:0001434,3.63e-16,100 | |||
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| ||
|short_description=p3@DNASE2 | |||
}} | }} |
Latest revision as of 21:41, 15 September 2015
Short description: | p3@DNASE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNASE2_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 25bp_to_ENST00000538460_5end |
EntrezGene: | DNASE2 |
HGNC: | 2960 |
UniProt: | B7Z4K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.53e-39 | 59 |
monocyte | 1.53e-39 | 59 |
monoblast | 1.53e-39 | 59 |
promonocyte | 1.53e-39 | 59 |
macrophage dendritic cell progenitor | 3.04e-39 | 61 |
myeloid leukocyte | 2.65e-37 | 72 |
defensive cell | 4.24e-35 | 48 |
phagocyte | 4.24e-35 | 48 |
granulocyte monocyte progenitor cell | 2.70e-33 | 67 |
myeloid lineage restricted progenitor cell | 1.25e-31 | 66 |
classical monocyte | 1.92e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-30 | 42 |
leukocyte | 7.54e-27 | 136 |
nongranular leukocyte | 4.75e-24 | 115 |
myeloid cell | 2.45e-21 | 108 |
common myeloid progenitor | 2.45e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 5.52e-19 | 120 |
hematopoietic stem cell | 8.38e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.32e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-15 | 161 |
hematopoietic cell | 1.78e-14 | 177 |
intermediate monocyte | 4.98e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.98e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.66e-27 | 76 |
hematopoietic system | 1.68e-26 | 98 |
blood island | 1.68e-26 | 98 |
bone element | 1.08e-24 | 82 |
immune system | 1.15e-22 | 93 |
hemolymphoid system | 1.24e-22 | 108 |
skeletal element | 9.85e-21 | 90 |
skeletal system | 3.63e-16 | 100 |