FFCP PHASE1:Hg19::chr22:50925279..50925294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55586 | |EntrezGene=55586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14522 | |HGNC=14522 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVH2 | |UniProt=A6PVH2 | ||
|association_with_transcript=-10bp_to_ENST00000395732_5end | |association_with_transcript=-10bp_to_ENST00000395732_5end | ||
|cluster_id=chr22:50925279..50925294,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_1_at_MIOX_5end | |description=CAGE_peak_1_at_MIOX_5end | ||
|id=chr22:50925279..50925294,+ | |id=chr22:50925279..50925294,+ | ||
|ontology_enrichment_celltype=CL:0000313!4.85e-07!1 | |ontology_enrichment_celltype=CL:0000313!4.85e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.82e-21;1!CL:0000159;2.47e-11;2!CL:0000650;4.52e-11;2!CL:1000500;4.52e-11;2!CL:1000618;4.52e-11;2!CL:1001318;4.52e-11;2!CL:0002173;4.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.82e-21,1;CL:0000159,2.47e-11,2;CL:0000650,4.52e-11,2;CL:1000500,4.52e-11,2;CL:1000618,4.52e-11,2;CL:1001318,4.52e-11,2;CL:0002173,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.14e-18;10!UBERON:0007687;1.14e-18;10 | |||
|ontology_enrichment_disease=DOID:4468!4.43e-12!2;DOID:305!2.99e-09!106;DOID:0050687!4.05e-09!143;DOID:299!2.62e-07!25;DOID:2152!4.85e-07!1 | |ontology_enrichment_disease=DOID:4468!4.43e-12!2;DOID:305!2.99e-09!106;DOID:0050687!4.05e-09!143;DOID:299!2.62e-07!25;DOID:2152!4.85e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.82e-21;1!DOID:4468;3.89e-11;2!DOID:299;9.68e-08;25!DOID:120;3.30e-07;27!DOID:193;9.50e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.82e-21,1;DOID:4468,3.70e-11,2;DOID:299,9.68e-08,25;DOID:120,3.30e-07,27;DOID:193,9.50e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002046!4.40e-17!5;UBERON:0004117!4.40e-17!5;UBERON:0007689!4.40e-17!5;UBERON:0007123!4.40e-17!5;UBERON:0003091!4.40e-17!5;UBERON:0009722!8.77e-17!11;UBERON:0007690!8.77e-17!11;UBERON:0003929!1.02e-13!54;UBERON:0005911!8.03e-13!82;UBERON:0008814!3.68e-12!15;UBERON:0002368!1.16e-10!35;UBERON:0005172!9.33e-10!55;UBERON:0005173!9.33e-10!55;UBERON:0002417!1.36e-08!61;UBERON:0000916!1.36e-08!61;UBERON:0000974!1.61e-08!10;UBERON:0000949!5.79e-08!45;UBERON:0002110!6.72e-08!3;UBERON:0006242!6.72e-08!3;UBERON:0000489!1.54e-07!32;UBERON:0002294!2.32e-07!7;UBERON:0001173!2.32e-07!7;UBERON:0004912!2.32e-07!7;UBERON:0002530!4.38e-07!59;UBERON:0009497!4.80e-07!25;UBERON:0000015!4.80e-07!25;UBERON:0002423!4.80e-07!25;UBERON:0006235!4.80e-07!25;UBERON:0004161!4.80e-07!25;UBERON:0004911!4.85e-07!1;UBERON:0001007!6.60e-07!155;UBERON:0001555!6.60e-07!155;UBERON:0007026!6.60e-07!155;UBERON:0002113!7.25e-07!27;UBERON:0003918!7.25e-07!27;UBERON:0005095!7.25e-07!27;UBERON:0007687!7.25e-07!27;UBERON:0005177!7.29e-07!107;UBERON:0004913!8.03e-07!1;UBERON:0003703!8.03e-07!1;UBERON:0001174!8.03e-07!1;UBERON:0004914!8.03e-07!1 | |ontology_enrichment_uberon=UBERON:0002046!4.40e-17!5;UBERON:0004117!4.40e-17!5;UBERON:0007689!4.40e-17!5;UBERON:0007123!4.40e-17!5;UBERON:0003091!4.40e-17!5;UBERON:0009722!8.77e-17!11;UBERON:0007690!8.77e-17!11;UBERON:0003929!1.02e-13!54;UBERON:0005911!8.03e-13!82;UBERON:0008814!3.68e-12!15;UBERON:0002368!1.16e-10!35;UBERON:0005172!9.33e-10!55;UBERON:0005173!9.33e-10!55;UBERON:0002417!1.36e-08!61;UBERON:0000916!1.36e-08!61;UBERON:0000974!1.61e-08!10;UBERON:0000949!5.79e-08!45;UBERON:0002110!6.72e-08!3;UBERON:0006242!6.72e-08!3;UBERON:0000489!1.54e-07!32;UBERON:0002294!2.32e-07!7;UBERON:0001173!2.32e-07!7;UBERON:0004912!2.32e-07!7;UBERON:0002530!4.38e-07!59;UBERON:0009497!4.80e-07!25;UBERON:0000015!4.80e-07!25;UBERON:0002423!4.80e-07!25;UBERON:0006235!4.80e-07!25;UBERON:0004161!4.80e-07!25;UBERON:0004911!4.85e-07!1;UBERON:0001007!6.60e-07!155;UBERON:0001555!6.60e-07!155;UBERON:0007026!6.60e-07!155;UBERON:0002113!7.25e-07!27;UBERON:0003918!7.25e-07!27;UBERON:0005095!7.25e-07!27;UBERON:0007687!7.25e-07!27;UBERON:0005177!7.29e-07!107;UBERON:0004913!8.03e-07!1;UBERON:0003703!8.03e-07!1;UBERON:0001174!8.03e-07!1;UBERON:0004914!8.03e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.82e-21;1!UBERON:0002113;1.23e-13;24!UBERON:0011143;1.23e-13;24!UBERON:0000489;2.37e-11;29!UBERON:0004909;2.47e-11;2!UBERON:0003567;4.52e-11;2!UBERON:0003838;4.52e-11;2!UBERON:0003586;4.52e-11;2!UBERON:0005169;4.52e-11;2!UBERON:0002321;4.52e-11;2!UBERON:0005215;4.52e-11;2!UBERON:0002303;4.52e-11;2!UBERON:0002319;4.52e-11;2!UBERON:0006554;5.50e-11;30!UBERON:0001008;5.50e-11;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.82e-21,1;UBERON:0002113,1.28e-12,26;UBERON:0003918,1.28e-12,26;UBERON:0011143,1.28e-12,26;UBERON:0005095,1.28e-12,26;UBERON:0007687,1.28e-12,26;UBERON:0004909,2.47e-11,2;UBERON:0003567,4.52e-11,2;UBERON:0003838,4.52e-11,2;UBERON:0003586,4.52e-11,2;UBERON:0005169,4.52e-11,2;UBERON:0002321,4.52e-11,2;UBERON:0005215,4.52e-11,2;UBERON:0002303,4.52e-11,2;UBERON:0002319,4.52e-11,2;UBERON:0000489,1.21e-10,31;UBERON:0006554,4.00e-07,47;UBERON:0001008,5.56e-07,48 | |||
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|short_description=p1@MIOX | |short_description=p1@MIOX | ||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p1@MIOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIOX_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | -10bp_to_ENST00000395732_5end |
EntrezGene: | MIOX |
HGNC: | 14522 |
UniProt: | A6PVH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.82e-21 | 1 |
seromucus secreting cell | 2.47e-11 | 2 |
mesangial cell | 4.52e-11 | 2 |
kidney interstitial cell | 4.52e-11 | 2 |
juxtaglomerular complex cell | 4.52e-11 | 2 |
renal interstitial pericyte | 4.52e-11 | 2 |
extraglomerular mesangial cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.82e-21 | 1 |
kidney | 1.28e-12 | 26 |
kidney mesenchyme | 1.28e-12 | 26 |
upper urinary tract | 1.28e-12 | 26 |
kidney rudiment | 1.28e-12 | 26 |
kidney field | 1.28e-12 | 26 |
epithelium of gonad | 2.47e-11 | 2 |
abdomen connective tissue | 4.52e-11 | 2 |
abdominal segment connective tissue | 4.52e-11 | 2 |
trunk connective tissue | 4.52e-11 | 2 |
interstitial tissue | 4.52e-11 | 2 |
extraglomerular mesangium | 4.52e-11 | 2 |
kidney interstitium | 4.52e-11 | 2 |
juxtaglomerular apparatus | 4.52e-11 | 2 |
mesangium | 4.52e-11 | 2 |
cavitated compound organ | 1.21e-10 | 31 |
urinary system structure | 4.00e-07 | 47 |
renal system | 5.56e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.82e-21 | 1 |
clear cell adenocarcinoma | 3.70e-11 | 2 |
adenocarcinoma | 9.68e-08 | 25 |
female reproductive organ cancer | 3.30e-07 | 27 |
reproductive organ cancer | 9.50e-07 | 29 |