FFCP PHASE1:Hg19::chr2:238672027..238672044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238672027..238672044,+ | |||
|coexpression_cluster_id=C829 | |coexpression_cluster_id=C829 | ||
|description=CAGE_peak_at_chr2:238672027..238672044,+ | |description=CAGE_peak_at_chr2:238672027..238672044,+ | ||
|id=chr2:238672027..238672044,+ | |id=chr2:238672027..238672044,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.93e-26!140;CL:0000766!1.33e-25!76;CL:0000037!4.32e-24!172;CL:0000566!4.32e-24!172;CL:0002032!5.00e-24!165;CL:0000837!5.00e-24!165;CL:0000557!1.07e-23!71;CL:0002009!2.53e-23!65;CL:0000763!3.71e-23!112;CL:0000049!3.71e-23!112;CL:0002057!6.14e-23!42;CL:0002194!6.44e-23!63;CL:0000576!6.44e-23!63;CL:0000040!6.44e-23!63;CL:0000559!6.44e-23!63;CL:0000988!1.37e-22!182;CL:0000860!1.84e-22!45;CL:0000839!2.42e-22!70;CL:0002087!6.55e-22!119;CL:0002031!2.70e-21!124;CL:0000063!8.76e-12!578;CL:0000134!1.62e-09!358;CL:0002320!3.58e-08!365;CL:0000219!3.09e-07!390 | |ontology_enrichment_celltype=CL:0000738!9.93e-26!140;CL:0000766!1.33e-25!76;CL:0000037!4.32e-24!172;CL:0000566!4.32e-24!172;CL:0002032!5.00e-24!165;CL:0000837!5.00e-24!165;CL:0000557!1.07e-23!71;CL:0002009!2.53e-23!65;CL:0000763!3.71e-23!112;CL:0000049!3.71e-23!112;CL:0002057!6.14e-23!42;CL:0002194!6.44e-23!63;CL:0000576!6.44e-23!63;CL:0000040!6.44e-23!63;CL:0000559!6.44e-23!63;CL:0000988!1.37e-22!182;CL:0000860!1.84e-22!45;CL:0000839!2.42e-22!70;CL:0002087!6.55e-22!119;CL:0002031!2.70e-21!124;CL:0000063!8.76e-12!578;CL:0000134!1.62e-09!358;CL:0002320!3.58e-08!365;CL:0000219!3.09e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-30;33!CL:0002057;2.70e-30;33!CL:0000473;1.96e-25;39!CL:0000234;1.96e-25;39!CL:0000576;5.80e-20;48!CL:0000766;4.10e-17;69!CL:0000763;1.59e-09;100!CL:0000738;2.81e-09;136!CL:0002087;6.90e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.69e-37,48;CL:0000234,3.69e-37,48;CL:0000860,1.10e-36,42;CL:0002057,1.10e-36,42;CL:0000766,2.56e-36,72;CL:0000557,3.46e-33,67;CL:0002194,4.73e-33,59;CL:0000576,4.73e-33,59;CL:0000040,4.73e-33,59;CL:0000559,4.73e-33,59;CL:0002009,8.51e-33,61;CL:0000839,1.41e-32,66;CL:0000738,5.73e-31,136;CL:0000763,1.09e-30,108;CL:0000049,1.09e-30,108;CL:0000037,1.99e-29,168;CL:0002032,2.27e-29,161;CL:0000837,2.27e-29,161;CL:0000988,5.52e-28,177;CL:0002087,1.46e-27,115;CL:0002031,6.58e-27,120;CL:0000134,3.24e-13,354;CL:0002320,2.73e-12,361;CL:0000219,1.78e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.58e-26;42!CL:0000049;1.99e-09;108 | |||
|ontology_enrichment_disease=DOID:162!3.63e-09!235;DOID:14566!1.49e-08!239 | |ontology_enrichment_disease=DOID:162!3.63e-09!235;DOID:14566!1.49e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.14e-18!80;UBERON:0002390!2.35e-17!102;UBERON:0003061!2.35e-17!102;UBERON:0001474!1.60e-15!86;UBERON:0002193!1.34e-13!112;UBERON:0004765!5.32e-13!101;UBERON:0001434!5.32e-13!101;UBERON:0002405!5.29e-10!115;UBERON:0002384!1.01e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!5.14e-18!80;UBERON:0002390!2.35e-17!102;UBERON:0003061!2.35e-17!102;UBERON:0001474!1.60e-15!86;UBERON:0002193!1.34e-13!112;UBERON:0004765!5.32e-13!101;UBERON:0001434!5.32e-13!101;UBERON:0002405!5.29e-10!115;UBERON:0002384!1.01e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-27,76;UBERON:0001474,2.08e-24,82;UBERON:0002390,4.77e-23,98;UBERON:0003061,4.77e-23,98;UBERON:0004765,1.74e-21,90;UBERON:0002405,1.62e-19,93;UBERON:0002193,5.29e-19,108;UBERON:0001434,2.04e-18,100;UBERON:0002384,4.73e-11,371;UBERON:0003081,7.16e-07,203 | |||
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| ||
|short_description=p@chr2:238672027..238672044,+ | |short_description=p@chr2:238672027..238672044,+ | ||
}} | }} |
Latest revision as of 08:16, 29 July 2015
Short description: | p@chr2:238672027..238672044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238672027..238672044, + |
Coexpression cluster: | C829_Neutrophils_CD14_Monocytederived_Prostate_acute_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.69e-37 | 48 |
phagocyte | 3.69e-37 | 48 |
classical monocyte | 1.10e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-36 | 42 |
myeloid leukocyte | 2.56e-36 | 72 |
granulocyte monocyte progenitor cell | 3.46e-33 | 67 |
monopoietic cell | 4.73e-33 | 59 |
monocyte | 4.73e-33 | 59 |
monoblast | 4.73e-33 | 59 |
promonocyte | 4.73e-33 | 59 |
macrophage dendritic cell progenitor | 8.51e-33 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-32 | 66 |
leukocyte | 5.73e-31 | 136 |
myeloid cell | 1.09e-30 | 108 |
common myeloid progenitor | 1.09e-30 | 108 |
hematopoietic stem cell | 1.99e-29 | 168 |
hematopoietic oligopotent progenitor cell | 2.27e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-29 | 161 |
hematopoietic cell | 5.52e-28 | 177 |
nongranular leukocyte | 1.46e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 6.58e-27 | 120 |
mesenchymal cell | 3.24e-13 | 354 |
connective tissue cell | 2.73e-12 | 361 |
motile cell | 1.78e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-27 | 76 |
bone element | 2.08e-24 | 82 |
hematopoietic system | 4.77e-23 | 98 |
blood island | 4.77e-23 | 98 |
skeletal element | 1.74e-21 | 90 |
immune system | 1.62e-19 | 93 |
hemolymphoid system | 5.29e-19 | 108 |
skeletal system | 2.04e-18 | 100 |
connective tissue | 4.73e-11 | 371 |
lateral plate mesoderm | 7.16e-07 | 203 |