FFCP PHASE1:Hg19::chr4:145580820..145580831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145580820..145580831,+ | |||
|coexpression_cluster_id=C580 | |coexpression_cluster_id=C580 | ||
|description=CAGE_peak_at_chr4:145580820..145580831,+ | |description=CAGE_peak_at_chr4:145580820..145580831,+ | ||
|id=chr4:145580820..145580831,+ | |id=chr4:145580820..145580831,+ | ||
|ontology_enrichment_celltype=CL:0000071!4.30e-19!18;CL:0002546!4.30e-19!18;CL:0002139!7.34e-17!24;CL:0000115!2.01e-15!35;CL:1000413!6.73e-15!9;CL:0002078!1.18e-11!44;CL:0002545!7.87e-09!2;CL:0000213!2.44e-08!57;CL:0000215!2.44e-08!57;CL:0002589!3.37e-08!2;CL:0002494!9.62e-08!16;CL:0000222!9.91e-08!119 | |ontology_enrichment_celltype=CL:0000071!4.30e-19!18;CL:0002546!4.30e-19!18;CL:0002139!7.34e-17!24;CL:0000115!2.01e-15!35;CL:1000413!6.73e-15!9;CL:0002078!1.18e-11!44;CL:0002545!7.87e-09!2;CL:0000213!2.44e-08!57;CL:0000215!2.44e-08!57;CL:0002589!3.37e-08!2;CL:0002494!9.62e-08!16;CL:0000222!9.91e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002545;2.21e-15;2!CL:1000413;1.69e-13;9!CL:0002592;1.04e-10;3!CL:0002494;5.09e-08;16!CL:0000071;3.14e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,1.78e-15,2;CL:1000413,1.69e-13,9;CL:0002592,9.90e-11,3;CL:0002494,5.09e-08,16;CL:0000071,3.14e-07,18;CL:0002546,3.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.14e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;2.01e-57;2!UBERON:0005058;2.01e-57;2!UBERON:0009113;2.01e-57;2!UBERON:0004177;1.02e-23;5!UBERON:0005057;1.02e-23;5!UBERON:0005800;2.21e-15;2!UBERON:0001515;2.21e-15;2!UBERON:0003915;1.69e-13;9!UBERON:0004700;1.69e-13;9!UBERON:0001917;1.69e-13;9!UBERON:0003498;1.04e-10;3!UBERON:0005985;1.04e-10;3!UBERON:0001621;1.04e-10;3!UBERON:0004638;3.14e-07;18!UBERON:0001986;3.14e-07;18!UBERON:0004852;3.14e-07;18!UBERON:0001637;6.48e-07;42!UBERON:0003509;6.48e-07;42!UBERON:0004572;6.48e-07;42 | |||
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| ||
|short_description=p@chr4:145580820..145580831,+ | |short_description=p@chr4:145580820..145580831,+ | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145580820..145580831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145580820..145580831, + |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 1.78e-15 | 2 |
endothelial cell of artery | 1.69e-13 | 9 |
smooth muscle cell of the coronary artery | 9.90e-11 | 3 |
cardiocyte | 5.09e-08 | 16 |
blood vessel endothelial cell | 3.14e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.37e-29 | 4 |
hemolymphoid system gland | 2.37e-29 | 4 |
thymic region | 2.37e-29 | 4 |
pharyngeal gland | 2.37e-29 | 4 |
thymus primordium | 2.37e-29 | 4 |
pharyngeal epithelium | 5.89e-20 | 6 |
hemopoietic organ | 2.90e-17 | 7 |
immune organ | 2.90e-17 | 7 |
segment of aorta | 1.78e-15 | 2 |
thoracic aorta | 1.78e-15 | 2 |
endothelial tube | 1.69e-13 | 9 |
arterial system endothelium | 1.69e-13 | 9 |
endothelium of artery | 1.69e-13 | 9 |
neck | 2.12e-12 | 10 |
gland of gut | 2.12e-12 | 10 |
chordate pharynx | 2.12e-12 | 10 |
pharyngeal region of foregut | 2.12e-12 | 10 |
pharynx | 2.30e-11 | 11 |
entire pharyngeal arch endoderm | 2.30e-11 | 11 |
early pharyngeal endoderm | 2.30e-11 | 11 |
coronary artery | 9.90e-11 | 3 |
pharyngeal arch system | 2.60e-07 | 18 |
blood vessel endothelium | 3.14e-07 | 18 |
endothelium | 3.14e-07 | 18 |
cardiovascular system endothelium | 3.14e-07 | 18 |
upper respiratory tract | 5.66e-07 | 19 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |