FFCP PHASE1:Hg19::chr4:79697539..79697550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55589 | |EntrezGene=55589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18041 | |HGNC=18041 | ||
|TSSclassifier=strong | |||
|UniProt=C9JC56,Q9NSY1,Q4W5H2 | |UniProt=C9JC56,Q9NSY1,Q4W5H2 | ||
|association_with_transcript=7bp_to_ENST00000264889,ENST00000335016,ENST00000502871,NM_017593,NM_198892,uc003hlj.2,uc003hlk.2,uc010ijl.1_5end | |association_with_transcript=7bp_to_ENST00000264889,ENST00000335016,ENST00000502871,NM_017593,NM_198892,uc003hlj.2,uc003hlk.2,uc010ijl.1_5end | ||
|cluster_id=chr4:79697539..79697550,+ | |||
|coexpression_cluster_id=C3217 | |coexpression_cluster_id=C3217 | ||
|description=CAGE_peak_2_at_BMP2K_5end | |description=CAGE_peak_2_at_BMP2K_5end | ||
|id=chr4:79697539..79697550,+ | |id=chr4:79697539..79697550,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.32e-27!112;CL:0000049!3.32e-27!112;CL:0000037!7.49e-22!172;CL:0000566!7.49e-22!172;CL:0002032!1.86e-21!165;CL:0000837!1.86e-21!165;CL:0000839!3.30e-19!70;CL:0000557!3.33e-19!71;CL:0000988!2.13e-18!182;CL:0000766!2.10e-16!76;CL:0002009!1.14e-15!65;CL:0002194!4.47e-15!63;CL:0000576!4.47e-15!63;CL:0000040!4.47e-15!63;CL:0000559!4.47e-15!63;CL:0000738!3.91e-14!140;CL:0002031!7.19e-14!124;CL:0000134!1.58e-11!358;CL:0002057!1.11e-10!42;CL:0002087!2.43e-10!119;CL:0002320!2.95e-10!365;CL:0000860!9.24e-10!45;CL:0000219!1.65e-09!390;CL:0000048!1.69e-07!430;CL:0000034!2.29e-07!444;CL:0000723!2.80e-07!436;CL:0000945!5.23e-07!24;CL:0000826!5.23e-07!24 | |ontology_enrichment_celltype=CL:0000763!3.32e-27!112;CL:0000049!3.32e-27!112;CL:0000037!7.49e-22!172;CL:0000566!7.49e-22!172;CL:0002032!1.86e-21!165;CL:0000837!1.86e-21!165;CL:0000839!3.30e-19!70;CL:0000557!3.33e-19!71;CL:0000988!2.13e-18!182;CL:0000766!2.10e-16!76;CL:0002009!1.14e-15!65;CL:0002194!4.47e-15!63;CL:0000576!4.47e-15!63;CL:0000040!4.47e-15!63;CL:0000559!4.47e-15!63;CL:0000738!3.91e-14!140;CL:0002031!7.19e-14!124;CL:0000134!1.58e-11!358;CL:0002057!1.11e-10!42;CL:0002087!2.43e-10!119;CL:0002320!2.95e-10!365;CL:0000860!9.24e-10!45;CL:0000219!1.65e-09!390;CL:0000048!1.69e-07!430;CL:0000034!2.29e-07!444;CL:0000723!2.80e-07!436;CL:0000945!5.23e-07!24;CL:0000826!5.23e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.22e-16;39!CL:0000234;1.22e-16;39!CL:0000860;2.62e-15;33!CL:0002057;2.62e-15;33!CL:0000576;2.32e-10;48!CL:0000766;1.04e-09;69!CL:0000763;2.46e-09;100!CL:0000945;6.25e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.63e-33,108;CL:0000049,1.63e-33,108;CL:0002032,1.09e-26,161;CL:0000837,1.09e-26,161;CL:0000037,1.71e-26,168;CL:0000839,1.13e-24,66;CL:0000557,1.18e-24,67;CL:0000988,4.52e-23,177;CL:0000766,1.01e-20,72;CL:0002009,6.02e-20,61;CL:0002194,3.62e-19,59;CL:0000576,3.62e-19,59;CL:0000040,3.62e-19,59;CL:0000559,3.62e-19,59;CL:0002031,2.76e-18,120;CL:0000738,1.20e-17,136;CL:0000473,8.76e-16,48;CL:0000234,8.76e-16,48;CL:0002087,9.03e-13,115;CL:0000860,8.09e-12,42;CL:0002057,8.09e-12,42;CL:0000134,1.11e-10,354;CL:0002320,1.18e-09,361;CL:0000219,1.78e-07,386;CL:0000945,3.69e-07,24;CL:0000826,3.69e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000049;1.29e-09;108!CL:0002057;3.09e-09;42 | |||
|ontology_enrichment_disease=DOID:8692!4.38e-08!31 | |ontology_enrichment_disease=DOID:8692!4.38e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.62e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.82e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.17e-18!112;UBERON:0002390!1.19e-16!102;UBERON:0003061!1.19e-16!102;UBERON:0002405!2.42e-15!115;UBERON:0002371!3.54e-15!80;UBERON:0001474!2.93e-14!86;UBERON:0004765!2.63e-12!101;UBERON:0001434!2.63e-12!101;UBERON:0007023!1.97e-10!115;UBERON:0002384!2.42e-09!375 | |ontology_enrichment_uberon=UBERON:0002193!4.17e-18!112;UBERON:0002390!1.19e-16!102;UBERON:0003061!1.19e-16!102;UBERON:0002405!2.42e-15!115;UBERON:0002371!3.54e-15!80;UBERON:0001474!2.93e-14!86;UBERON:0004765!2.63e-12!101;UBERON:0001434!2.63e-12!101;UBERON:0007023!1.97e-10!115;UBERON:0002384!2.42e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.85e-21,93;UBERON:0002193,2.39e-21,108;UBERON:0002390,4.49e-20,98;UBERON:0003061,4.49e-20,98;UBERON:0002371,5.38e-19,76;UBERON:0001474,1.02e-17,82;UBERON:0004765,3.34e-14,90;UBERON:0001434,2.38e-13,100;UBERON:0007023,3.61e-10,114;UBERON:0002384,1.49e-08,371;UBERON:0003081,2.70e-08,203 | |||
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| ||
|short_description=p2@BMP2K | |short_description=p2@BMP2K | ||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p2@BMP2K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMP2K_5end |
Coexpression cluster: | C3217_Mast_Macrophage_acute_Reticulocytes_CD14_granulocyte_Monocytederived |
Association with transcript: | 7bp_to_ENST00000264889, ENST00000335016, ENST00000502871, NM_017593, NM_198892, uc003hlj.2, uc003hlk.2, uc010ijl.1_5end |
EntrezGene: | BMP2K |
HGNC: | 18041 |
UniProt: | C9JC56Q9NSY1Q4W5H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.63e-33 | 108 |
common myeloid progenitor | 1.63e-33 | 108 |
hematopoietic oligopotent progenitor cell | 1.09e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-26 | 161 |
hematopoietic stem cell | 1.71e-26 | 168 |
myeloid lineage restricted progenitor cell | 1.13e-24 | 66 |
granulocyte monocyte progenitor cell | 1.18e-24 | 67 |
hematopoietic cell | 4.52e-23 | 177 |
myeloid leukocyte | 1.01e-20 | 72 |
macrophage dendritic cell progenitor | 6.02e-20 | 61 |
monopoietic cell | 3.62e-19 | 59 |
monocyte | 3.62e-19 | 59 |
monoblast | 3.62e-19 | 59 |
promonocyte | 3.62e-19 | 59 |
hematopoietic lineage restricted progenitor cell | 2.76e-18 | 120 |
leukocyte | 1.20e-17 | 136 |
defensive cell | 8.76e-16 | 48 |
phagocyte | 8.76e-16 | 48 |
nongranular leukocyte | 9.03e-13 | 115 |
classical monocyte | 8.09e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.09e-12 | 42 |
mesenchymal cell | 1.11e-10 | 354 |
connective tissue cell | 1.18e-09 | 361 |
motile cell | 1.78e-07 | 386 |
lymphocyte of B lineage | 3.69e-07 | 24 |
pro-B cell | 3.69e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.85e-21 | 93 |
hemolymphoid system | 2.39e-21 | 108 |
hematopoietic system | 4.49e-20 | 98 |
blood island | 4.49e-20 | 98 |
bone marrow | 5.38e-19 | 76 |
bone element | 1.02e-17 | 82 |
skeletal element | 3.34e-14 | 90 |
skeletal system | 2.38e-13 | 100 |
adult organism | 3.61e-10 | 114 |
connective tissue | 1.49e-08 | 371 |
lateral plate mesoderm | 2.70e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.82e-09 | 31 |