FFCP PHASE1:Hg19::chr5:133451190..133451218,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:133451190..133451218,- | |||
|coexpression_cluster_id=C476 | |coexpression_cluster_id=C476 | ||
|description=CAGE_peak_at_chr5:133451190..133451218,- | |description=CAGE_peak_at_chr5:133451190..133451218,- | ||
|id=chr5:133451190..133451218,- | |id=chr5:133451190..133451218,- | ||
|ontology_enrichment_celltype=CL:0000791!1.17e-15!18;CL:0000789!1.17e-15!18;CL:0002420!1.17e-15!18;CL:0002419!1.17e-15!18;CL:0000790!1.17e-15!18;CL:0000625!1.33e-13!11;CL:0000084!1.10e-12!25;CL:0000827!1.10e-12!25;CL:0000542!4.45e-11!53;CL:0000051!4.45e-11!53;CL:0000838!1.20e-10!52 | |ontology_enrichment_celltype=CL:0000791!1.17e-15!18;CL:0000789!1.17e-15!18;CL:0002420!1.17e-15!18;CL:0002419!1.17e-15!18;CL:0000790!1.17e-15!18;CL:0000625!1.33e-13!11;CL:0000084!1.10e-12!25;CL:0000827!1.10e-12!25;CL:0000542!4.45e-11!53;CL:0000051!4.45e-11!53;CL:0000838!1.20e-10!52 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.09e-42;11!CL:0000791;6.29e-40;18!CL:0000789;6.29e-40;18!CL:0002419;6.29e-40;18!CL:0000084;2.90e-32;25!CL:0000542;1.10e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.16e-42,11;CL:0000791,1.85e-40,18;CL:0000789,1.85e-40,18;CL:0002420,1.85e-40,18;CL:0002419,1.85e-40,18;CL:0000790,1.85e-40,18;CL:0000084,1.20e-32,25;CL:0000827,1.20e-32,25;CL:0000838,3.70e-18,52;CL:0000542,9.75e-18,53;CL:0000051,9.75e-18,53;CL:0002087,7.42e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;6.29e-40;18!CL:0000051;1.10e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15 | |ontology_enrichment_uberon=UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-24;15!UBERON:0000179;2.78e-24;15!UBERON:0000463;2.78e-24;15!UBERON:0002390;1.48e-13;32!UBERON:0002370;9.26e-10;2!UBERON:0005058;9.26e-10;2!UBERON:0009113;9.26e-10;2!UBERON:0002193;1.74e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.48e-24,15;UBERON:0000179,5.48e-24,15;UBERON:0000463,5.48e-24,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0,0,0.574752439954483,0,0,0,0,0,0,1.12101712596307,0,1.37696839079683,1.96505381374582,0.616804496998528,0.167186495390678,1.30368906653436,1.89379122293893,1.94826728407911,0,0,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,1.15106533222573,0.552700035571697,0.579606171470105,1.33457906845854,2.1403266247177,2.09071047609954,0,0.766440987203842,1.71813722741315,0,1.59282707162048,3.90650072313851,5.70271226669025,1.80690142893327,3.83959833463255,6.24653632761729,2.13099526839615,1.64225599384209,1.00803371612366,1.87208137048455,1.44824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.464775771478074,1.45125477021519,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0.245976877086227,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,1.37921532141349,0.646882724578552,0.641715181398742,0.508189248444927,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.246381468041427,0.519254429183621,0,1.45031339509947,0,0,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,1.56869953835371,0,0,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,2.62054953003568,1.23408681925858,1.29694662238543,1.08006287447623,1.58625035258854,0,0,0,0.185803175125719,0,3.34366663737546,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0.189559738885464,1.20258735531594,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0.343609788497747,0.343189995723929,0.14405479798815,0,0.471388069233591,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.471824806979294,0,0,0,0,1.76828463311521,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.643288897589907,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.731507549893617,0,0.102662806856247,0,0,0,0.397901550322736,0,0.22589216407792,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,1.46067277649303,0.917458566809082,0,0,0,0,0,0,0,0,0,1.09265571963696,0.760191006068622,0.101988829741982,0,0.18378979906969,0,0.378893491091197,0.535928260312357,0,0,0,0.714193294391221,8.4611471885168,11.8562704305089,0,0,0.202117188958219,0,0,0.80822463617505,0.0717222053926763,0.332660356546013,0.244209805832924,0.106727345877715,0,0.449126010532934,0,0,0,0,2.21401172950129,0.961705476909699 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0,0,0.574752439954483,0,0,0,0,0,0,1.12101712596307,0,1.37696839079683,1.96505381374582,0.616804496998528,0.167186495390678,1.30368906653436,1.89379122293893,1.94826728407911,0,0,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,1.15106533222573,0.552700035571697,0.579606171470105,1.33457906845854,2.1403266247177,2.09071047609954,0,0.766440987203842,1.71813722741315,0,1.59282707162048,3.90650072313851,5.70271226669025,1.80690142893327,3.83959833463255,6.24653632761729,2.13099526839615,1.64225599384209,1.00803371612366,1.87208137048455,1.44824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.464775771478074,1.45125477021519,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0.245976877086227,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,1.37921532141349,0.646882724578552,0.641715181398742,0.508189248444927,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.246381468041427,0.519254429183621,0,1.45031339509947,0,0,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,1.56869953835371,0,0,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,2.62054953003568,1.23408681925858,1.29694662238543,1.08006287447623,1.58625035258854,0,0,0,0.185803175125719,0,3.34366663737546,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0.189559738885464,1.20258735531594,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0.343609788497747,0.343189995723929,0.14405479798815,0,0.471388069233591,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.471824806979294,0,0,0,0,1.76828463311521,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.643288897589907,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.731507549893617,0,0.102662806856247,0,0,0,0.397901550322736,0,0.22589216407792,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,1.46067277649303,0.917458566809082,0,0,0,0,0,0,0,0,0,1.09265571963696,0.760191006068622,0.101988829741982,0,0.18378979906969,0,0.378893491091197,0.535928260312357,0,0,0,0.714193294391221,8.4611471885168,11.8562704305089,0,0,0.202117188958219,0,0,0.80822463617505,0.0717222053926763,0.332660356546013,0.244209805832924,0.106727345877715,0,0.449126010532934,0,0,0,0,2.21401172950129,0.961705476909699 | ||
|short_description=p@chr5:133451190..133451218,- | |short_description=p@chr5:133451190..133451218,- | ||
}} | }} |
Latest revision as of 09:45, 30 July 2015
Short description: | p@chr5:133451190..133451218, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133451190..133451218, - |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.16e-42 | 11 |
mature alpha-beta T cell | 1.85e-40 | 18 |
alpha-beta T cell | 1.85e-40 | 18 |
immature T cell | 1.85e-40 | 18 |
mature T cell | 1.85e-40 | 18 |
immature alpha-beta T cell | 1.85e-40 | 18 |
T cell | 1.20e-32 | 25 |
pro-T cell | 1.20e-32 | 25 |
lymphoid lineage restricted progenitor cell | 3.70e-18 | 52 |
lymphocyte | 9.75e-18 | 53 |
common lymphoid progenitor | 9.75e-18 | 53 |
nongranular leukocyte | 7.42e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 5.48e-24 | 15 |
haemolymphatic fluid | 5.48e-24 | 15 |
organism substance | 5.48e-24 | 15 |