FFCP PHASE1:Hg19::chr19:4153719..4153730,+: Difference between revisions
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|id=chr19:4153719..4153730,+
|short_description=p2@CREB3L3
|description=CAGE_peak_2_at_CREB3L3_5end
|association_with_transcript=90bp_to_ENST00000078445,ENST0000025...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84699 | |EntrezGene=84699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18855 | |HGNC=18855 | ||
|TSSclassifier=strong | |||
|UniProt=Q68CJ9,Q9Y4A3 | |UniProt=Q68CJ9,Q9Y4A3 | ||
|association_with_transcript=90bp_to_ENST00000078445,ENST00000252587,ENST00000381943,NM_032607,uc002lzl.2,uc002lzm.2,uc010xib.1,uc010xic.1_5end | |||
|cluster_id=chr19:4153719..4153730,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_CREB3L3_5end | |||
|id=chr19:4153719..4153730,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.60e-24!12;CL:0000417!1.60e-24!12;CL:0000668!1.60e-24!12;CL:0000414!1.60e-24!12;CL:0000412!1.60e-24!12;CL:0000182!1.60e-24!12;CL:0000223!8.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.26e-19;12!CL:0000746;1.54e-09;3!CL:0000737;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12;CL:0000746,1.67e-09,3;CL:0000513,1.67e-09,3;CL:0000737,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!CL:0000513;1.54e-09;3!UBERON:0009497;1.22e-08;13 | |||
|ontology_enrichment_disease=DOID:4929!4.42e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.19e-30!19;UBERON:0006925!6.19e-30!19;UBERON:0008836!6.19e-30!19;UBERON:0008835!8.69e-26!22;UBERON:0003894!8.69e-26!22;UBERON:0009854!1.21e-24!23;UBERON:0007499!1.24e-22!25;UBERON:0009497!1.24e-22!25;UBERON:0000015!1.24e-22!25;UBERON:0002423!1.24e-22!25;UBERON:0006235!1.24e-22!25;UBERON:0004161!1.24e-22!25;UBERON:0005057!9.64e-22!26;UBERON:0009856!9.64e-22!26;UBERON:0002365!3.78e-18!31;UBERON:0002330!3.78e-18!31;UBERON:0002368!5.20e-16!35;UBERON:0000949!5.76e-16!45;UBERON:0003929!3.66e-10!54;UBERON:0005172!5.75e-10!55;UBERON:0005173!5.75e-10!55;UBERON:0004921!1.54e-09!129;UBERON:0004185!1.54e-09!129;UBERON:0002530!3.01e-09!59;UBERON:0002417!6.36e-09!61;UBERON:0000916!6.36e-09!61;UBERON:0001007!1.07e-07!155;UBERON:0001555!1.07e-07!155;UBERON:0007026!1.07e-07!155;UBERON:0002108!1.28e-07!14;UBERON:0003914!4.85e-07!118;UBERON:0000160!6.08e-07!27;UBERON:0004119!6.18e-07!169;UBERON:0000925!6.18e-07!169;UBERON:0006595!6.18e-07!169;UBERON:0001041!7.38e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.07e-33;19!UBERON:0006925;7.07e-33;19!UBERON:0002423;4.28e-25;25!UBERON:0002108;1.48e-20;4!UBERON:0002365;2.93e-20;31!UBERON:0002330;2.93e-20;31!UBERON:0002368;1.64e-17;33!UBERON:0000949;9.93e-13;43!UBERON:0001007;9.93e-10;81!UBERON:0005172;3.32e-09;52!UBERON:0005173;3.32e-09;52!UBERON:0002417;3.85e-07;58!UBERON:0000916;3.85e-07;58!UBERON:0002530;9.63e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002108,1.48e-20,4;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0004921,3.10e-10,118;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0005911,7.71e-08,82;UBERON:0003914,9.71e-08,117;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0005256,2.02e-07,122;UBERON:0001041,2.13e-07,87 | |||
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|short_description=p2@CREB3L3 | |||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p2@CREB3L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CREB3L3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 90bp_to_ENST00000078445, ENST00000252587, ENST00000381943, NM_032607, uc002lzl.2, uc002lzm.2, uc010xib.1, uc010xic.1_5end |
EntrezGene: | CREB3L3 |
HGNC: | 18855 |
UniProt: | Q68CJ9Q9Y4A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |
cardiac muscle cell | 1.67e-09 | 3 |
cardiac muscle myoblast | 1.67e-09 | 3 |
striated muscle cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
small intestine | 1.48e-20 | 4 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
subdivision of digestive tract | 3.10e-10 | 118 |
digestive system | 2.49e-08 | 145 |
digestive tract | 2.49e-08 | 145 |
primitive gut | 2.49e-08 | 145 |
endo-epithelium | 7.71e-08 | 82 |
epithelial tube | 9.71e-08 | 117 |
endoderm-derived structure | 1.52e-07 | 160 |
endoderm | 1.52e-07 | 160 |
presumptive endoderm | 1.52e-07 | 160 |
trunk mesenchyme | 2.02e-07 | 122 |
foregut | 2.13e-07 | 87 |