FFCP PHASE1:Hg19::chr8:41166927..41166938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6422 | |EntrezGene=6422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10776 | |HGNC=10776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_uc003xnt.2_5end | |association_with_transcript=41bp_to_uc003xnt.2_5end | ||
|cluster_id=chr8:41166927..41166938,- | |||
|coexpression_cluster_id=C863 | |coexpression_cluster_id=C863 | ||
|description=CAGE_peak_2_at_SFRP1_5end | |description=CAGE_peak_2_at_SFRP1_5end | ||
|id=chr8:41166927..41166938,- | |id=chr8:41166927..41166938,- | ||
|ontology_enrichment_celltype=CL:0000055!2.06e-17!180;CL:0000057!1.07e-12!75;CL:0000192!1.24e-11!42;CL:0000514!1.24e-11!42;CL:0000393!7.35e-11!60;CL:0000211!7.35e-11!60;CL:0000183!7.40e-11!59;CL:0000187!2.41e-10!54;CL:0000680!4.22e-10!57;CL:0000056!4.22e-10!57;CL:0000355!4.22e-10!57;CL:0000359!3.96e-09!32 | |ontology_enrichment_celltype=CL:0000055!2.06e-17!180;CL:0000057!1.07e-12!75;CL:0000192!1.24e-11!42;CL:0000514!1.24e-11!42;CL:0000393!7.35e-11!60;CL:0000211!7.35e-11!60;CL:0000183!7.40e-11!59;CL:0000187!2.41e-10!54;CL:0000680!4.22e-10!57;CL:0000056!4.22e-10!57;CL:0000355!4.22e-10!57;CL:0000359!3.96e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.07e-09;32!CL:0000192;1.85e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.79e-11,43;CL:0000514,3.79e-11,43;CL:0000057,5.78e-10,76;CL:0000359,2.09e-09,32;CL:0000393,1.36e-07,61;CL:0000211,1.36e-07,61;CL:0000187,5.88e-07,55;CL:0000680,9.19e-07,58;CL:0000056,9.19e-07,58;CL:0000355,9.19e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.85e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001456;3.83e-11;21!UBERON:0007625;7.48e-11;11!UBERON:0004573;5.20e-10;33!UBERON:0004571;5.20e-10;33!UBERON:0000970;6.48e-10;20!UBERON:0000019;1.82e-09;19!UBERON:0000047;1.82e-09;19!UBERON:0004088;1.82e-09;19!UBERON:0010230;1.82e-09;19!UBERON:0002104;3.29e-09;21!UBERON:0000020;5.19e-09;23!UBERON:0001032;2.00e-08;24!UBERON:0004456;2.00e-08;24!UBERON:0001444;6.74e-08;48!UBERON:0000033;2.20e-07;50!UBERON:0001801;4.08e-07;14!UBERON:0007811;5.34e-07;52 | |||
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| ||
|short_description=p2@SFRP1 | |short_description=p2@SFRP1 | ||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p2@SFRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFRP1_5end |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | 41bp_to_uc003xnt.2_5end |
EntrezGene: | SFRP1 |
HGNC: | 10776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.79e-11 | 43 |
smooth muscle myoblast | 3.79e-11 | 43 |
fibroblast | 5.78e-10 | 76 |
vascular associated smooth muscle cell | 2.09e-09 | 32 |
electrically responsive cell | 1.36e-07 | 61 |
electrically active cell | 1.36e-07 | 61 |
muscle cell | 5.88e-07 | 55 |
muscle precursor cell | 9.19e-07 | 58 |
myoblast | 9.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 2.53e-11 | 49 |
systemic artery | 2.79e-11 | 33 |
systemic arterial system | 2.79e-11 | 33 |
pigment epithelium of eye | 6.49e-11 | 11 |
face | 2.09e-10 | 22 |
head | 9.28e-10 | 56 |
ectodermal placode | 1.17e-09 | 31 |
eye | 3.42e-09 | 21 |
visual system | 3.42e-09 | 21 |
camera-type eye | 9.09e-09 | 20 |
simple eye | 9.09e-09 | 20 |
immature eye | 9.09e-09 | 20 |
ocular region | 9.09e-09 | 20 |
eyeball of camera-type eye | 9.09e-09 | 20 |
optic cup | 9.09e-09 | 20 |
optic vesicle | 9.09e-09 | 20 |
eye primordium | 9.09e-09 | 20 |
organ component layer | 1.14e-08 | 66 |
anterior region of body | 1.30e-08 | 62 |
craniocervical region | 1.30e-08 | 62 |
sense organ | 1.88e-08 | 24 |
sensory system | 1.88e-08 | 24 |
entire sense organ system | 1.88e-08 | 24 |
artery | 2.13e-08 | 42 |
arterial blood vessel | 2.13e-08 | 42 |
arterial system | 2.13e-08 | 42 |
surface structure | 1.08e-07 | 99 |
dense mesenchyme tissue | 1.60e-07 | 73 |
somite | 2.95e-07 | 71 |
presomitic mesoderm | 2.95e-07 | 71 |
presumptive segmental plate | 2.95e-07 | 71 |
dermomyotome | 2.95e-07 | 71 |
trunk paraxial mesoderm | 2.95e-07 | 71 |
anterior segment of eyeball | 4.78e-07 | 14 |
paraxial mesoderm | 4.95e-07 | 72 |
presumptive paraxial mesoderm | 4.95e-07 | 72 |