FFCP PHASE1:Hg19::chr8:48911486..48911495,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:48911486..48911495,- | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_at_chr8:48911486..48911495,- | |description=CAGE_peak_at_chr8:48911486..48911495,- | ||
|id=chr8:48911486..48911495,- | |id=chr8:48911486..48911495,- | ||
|ontology_enrichment_celltype=CL:0002563!1.33e-10!4 | |ontology_enrichment_celltype=CL:0002563!1.33e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;8.11e-19;4!CL:0002253;2.49e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.11e-19,4;CL:0002253,2.49e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.12e-26!27;UBERON:0005409!2.12e-25!35;UBERON:0000059!7.64e-22!11;UBERON:0001155!1.94e-17!9;UBERON:0004921!4.14e-14!129;UBERON:0004185!4.14e-14!129;UBERON:0001007!4.18e-13!155;UBERON:0001555!4.18e-13!155;UBERON:0007026!4.18e-13!155;UBERON:0001046!2.69e-12!19;UBERON:0004119!8.20e-12!169;UBERON:0000925!8.20e-12!169;UBERON:0006595!8.20e-12!169;UBERON:0001052!1.27e-10!4;UBERON:0001242!1.33e-10!4;UBERON:0001262!1.33e-10!4;UBERON:0004786!1.33e-10!4;UBERON:0004808!1.33e-10!4;UBERON:0001277!1.33e-10!4;UBERON:0004907!1.13e-08!5;UBERON:0003350!1.18e-08!5 | |ontology_enrichment_uberon=UBERON:0000160!1.12e-26!27;UBERON:0005409!2.12e-25!35;UBERON:0000059!7.64e-22!11;UBERON:0001155!1.94e-17!9;UBERON:0004921!4.14e-14!129;UBERON:0004185!4.14e-14!129;UBERON:0001007!4.18e-13!155;UBERON:0001555!4.18e-13!155;UBERON:0007026!4.18e-13!155;UBERON:0001046!2.69e-12!19;UBERON:0004119!8.20e-12!169;UBERON:0000925!8.20e-12!169;UBERON:0006595!8.20e-12!169;UBERON:0001052!1.27e-10!4;UBERON:0001242!1.33e-10!4;UBERON:0001262!1.33e-10!4;UBERON:0004786!1.33e-10!4;UBERON:0004808!1.33e-10!4;UBERON:0001277!1.33e-10!4;UBERON:0004907!1.13e-08!5;UBERON:0003350!1.18e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.18e-63;17!UBERON:0005409;1.73e-62;22!UBERON:0004921;1.86e-36;33!UBERON:0002108;4.80e-33;4!UBERON:0000059;1.85e-26;11!UBERON:0001052;8.11e-19;4!UBERON:0001242;8.11e-19;4!UBERON:0001262;8.11e-19;4!UBERON:0004786;8.11e-19;4!UBERON:0004808;8.11e-19;4!UBERON:0001277;8.11e-19;4!UBERON:0001155;1.01e-18;9!UBERON:0004907;2.90e-15;5!UBERON:0001555;6.79e-15;54!UBERON:0000485;3.48e-11;7!UBERON:0003929;3.48e-11;7!UBERON:0003350;6.63e-10;8!UBERON:0001007;1.42e-08;81!UBERON:0002114;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.58e-63,17;UBERON:0005409,2.70e-55,25;UBERON:0002108,5.36e-33,4;UBERON:0000059,1.57e-26,11;UBERON:0001052,7.41e-19,4;UBERON:0001242,8.11e-19,4;UBERON:0001262,8.11e-19,4;UBERON:0004786,8.11e-19,4;UBERON:0004808,8.11e-19,4;UBERON:0001277,8.11e-19,4;UBERON:0001155,9.21e-19,9;UBERON:0004907,2.70e-15,5;UBERON:0004921,1.01e-11,118;UBERON:0003350,6.63e-10,8;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0000485,6.61e-09,9;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0002114,2.05e-07,2;UBERON:0011216,2.82e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68570835724488,0,2.98578579323551,5.74974169271705,0.611030144933625,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,4.93914611890846,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6853822119443,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68570835724488,0,2.98578579323551,5.74974169271705,0.611030144933625,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,4.93914611890846,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6853822119443,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:48911486..48911495,- | |short_description=p@chr8:48911486..48911495,- | ||
}} | }} |
Latest revision as of 18:44, 31 July 2015
Short description: | p@chr8:48911486..48911495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:48911486..48911495, - |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.11e-19 | 4 |
epithelial cell of large intestine | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.58e-63 | 17 |
gastrointestinal system | 2.70e-55 | 25 |
small intestine | 5.36e-33 | 4 |
large intestine | 1.57e-26 | 11 |
rectum | 7.41e-19 | 4 |
intestinal mucosa | 8.11e-19 | 4 |
wall of intestine | 8.11e-19 | 4 |
gastrointestinal system mucosa | 8.11e-19 | 4 |
gastrointestinal system epithelium | 8.11e-19 | 4 |
intestinal epithelium | 8.11e-19 | 4 |
colon | 9.21e-19 | 9 |
lower digestive tract | 2.70e-15 | 5 |
subdivision of digestive tract | 1.01e-11 | 118 |
epithelium of mucosa | 6.63e-10 | 8 |
digestive system | 1.95e-09 | 145 |
digestive tract | 1.95e-09 | 145 |
primitive gut | 1.95e-09 | 145 |
simple columnar epithelium | 6.61e-09 | 9 |
endoderm-derived structure | 1.71e-08 | 160 |
endoderm | 1.71e-08 | 160 |
presumptive endoderm | 1.71e-08 | 160 |
duodenum | 2.05e-07 | 2 |
organ system subdivision | 2.82e-07 | 223 |