FFCP PHASE1:Hg19::chr19:52320046..52320049,-: Difference between revisions
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|id=chr19:52320046..52320049,-
|short_description=p@chr19:52320046..52320049,-
|description=CAGE_peak_at_chr19:52320046..52320049,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:52320046..52320049,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr19:52320046..52320049,- | |||
|id=chr19:52320046..52320049,- | |||
|ontology_enrichment_celltype=CL:0002057!8.66e-84!42;CL:0000860!8.06e-78!45;CL:0000766!6.85e-67!76;CL:0002009!6.75e-64!65;CL:0002194!1.95e-61!63;CL:0000576!1.95e-61!63;CL:0000040!1.95e-61!63;CL:0000559!1.95e-61!63;CL:0000557!4.67e-58!71;CL:0000839!8.78e-55!70;CL:0000763!1.62e-46!112;CL:0000049!1.62e-46!112;CL:0000738!1.74e-46!140;CL:0002087!2.94e-40!119;CL:0000037!1.27e-36!172;CL:0000566!1.27e-36!172;CL:0000988!3.04e-34!182;CL:0002031!3.46e-33!124;CL:0002032!1.29e-31!165;CL:0000837!1.29e-31!165;CL:0002393!8.60e-28!9;CL:0002397!8.60e-28!9;CL:0000767!1.70e-17!3;CL:0000842!1.30e-16!3;CL:0000134!5.29e-14!358;CL:0002320!1.34e-13!365;CL:0000224!1.37e-12!4;CL:0000219!3.62e-12!390;CL:0000094!2.52e-11!8;CL:0000048!1.88e-10!430;CL:0000723!3.29e-10!436;CL:0000034!6.80e-10!444;CL:0000080!1.52e-08!6;CL:0000081!3.02e-08!11;CL:0000840!5.24e-08!5;CL:0001029!5.24e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000767;2.55e-41;3!CL:0002393;2.55e-35;6!CL:0002397;2.55e-35;6!CL:0000094;2.94e-27;8!CL:0000081;6.24e-20;11!CL:0000576;4.56e-16;48!CL:0000766;2.26e-14;69!CL:0000860;2.40e-13;33!CL:0002057;2.40e-13;33!CL:0000473;2.59e-10;39!CL:0000234;2.59e-10;39!CL:0000763;4.84e-10;100!CL:0000771;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.57e-41,3;CL:0000766,5.54e-34,72;CL:0000860,4.00e-30,42;CL:0002057,4.00e-30,42;CL:0000094,3.05e-27,8;CL:0000473,3.08e-26,48;CL:0000234,3.08e-26,48;CL:0002393,8.48e-24,9;CL:0002397,8.48e-24,9;CL:0000763,2.63e-22,108;CL:0000049,2.63e-22,108;CL:0002194,8.64e-21,59;CL:0000576,8.64e-21,59;CL:0000040,8.64e-21,59;CL:0000559,8.64e-21,59;CL:0000738,2.98e-20,136;CL:0002009,4.37e-20,61;CL:0000081,6.41e-20,11;CL:0000839,1.65e-18,66;CL:0000557,3.20e-18,67;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0002087,1.73e-12,115;CL:0002031,9.47e-10,120;CL:0000771,6.58e-08,2;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-22;42!CL:0000049;1.07e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.43e-51!80;UBERON:0002390!5.09e-48!102;UBERON:0003061!5.09e-48!102;UBERON:0001474!5.60e-47!86;UBERON:0002193!3.43e-43!112;UBERON:0004765!3.74e-39!101;UBERON:0001434!3.74e-39!101;UBERON:0002405!1.13e-33!115;UBERON:0002204!2.64e-21!167;UBERON:0003081!2.60e-19!216;UBERON:0002384!4.81e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.74e-16,76;UBERON:0002390,7.50e-15,98;UBERON:0003061,7.50e-15,98;UBERON:0001474,9.81e-15,82;UBERON:0002193,2.25e-13,108;UBERON:0004765,2.42e-13,90;UBERON:0002405,7.01e-13,93;UBERON:0001434,6.56e-12,100 | |||
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|short_description=p@chr19:52320046..52320049,- | |||
}} | }} |
Latest revision as of 16:49, 27 July 2015
Short description: | p@chr19:52320046..52320049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52320046..52320049, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.57e-41 | 3 |
myeloid leukocyte | 5.54e-34 | 72 |
classical monocyte | 4.00e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-30 | 42 |
granulocyte | 3.05e-27 | 8 |
defensive cell | 3.08e-26 | 48 |
phagocyte | 3.08e-26 | 48 |
intermediate monocyte | 8.48e-24 | 9 |
CD14-positive, CD16-positive monocyte | 8.48e-24 | 9 |
myeloid cell | 2.63e-22 | 108 |
common myeloid progenitor | 2.63e-22 | 108 |
monopoietic cell | 8.64e-21 | 59 |
monocyte | 8.64e-21 | 59 |
monoblast | 8.64e-21 | 59 |
promonocyte | 8.64e-21 | 59 |
leukocyte | 2.98e-20 | 136 |
macrophage dendritic cell progenitor | 4.37e-20 | 61 |
blood cell | 6.41e-20 | 11 |
myeloid lineage restricted progenitor cell | 1.65e-18 | 66 |
granulocyte monocyte progenitor cell | 3.20e-18 | 67 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-14 | 161 |
nongranular leukocyte | 1.73e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 9.47e-10 | 120 |
eosinophil | 6.58e-08 | 2 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.74e-16 | 76 |
hematopoietic system | 7.50e-15 | 98 |
blood island | 7.50e-15 | 98 |
bone element | 9.81e-15 | 82 |
hemolymphoid system | 2.25e-13 | 108 |
skeletal element | 2.42e-13 | 90 |
immune system | 7.01e-13 | 93 |
skeletal system | 6.56e-12 | 100 |