FFCP PHASE1:Hg19::chr6:23228836..23228864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:23228836..23228864,+ | |||
|coexpression_cluster_id=C77 | |coexpression_cluster_id=C77 | ||
|description=CAGE_peak_at_chr6:23228836..23228864,+ | |description=CAGE_peak_at_chr6:23228836..23228864,+ | ||
|id=chr6:23228836..23228864,+ | |id=chr6:23228836..23228864,+ | ||
|ontology_enrichment_celltype=CL:0000319;5.15e-14;1!CL:0002553;7.09e-14;1!CL:0000082;9.13e-11;19!CL:0000159;1.20e-07;2!CL:1000415;1.28e-07;2 | |ontology_enrichment_celltype=CL:1000415!4.99e-09!2;CL:0000082!3.18e-07!19;CL:0000066!8.53e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0000319;5.15e-14;1!CL:0002553;7.09e-14;1!CL:0000082;9.13e-11;19!CL:0000159;1.20e-07;2!CL:1000415;1.28e-07;2 | ||
|ontology_enrichment_disease=DOID:0050615;1.60e-19;16!DOID:0050619;3.50e-14;1!DOID:1357;3.50e-14;1!DOID:3030;5.15e-14;1!DOID:1324;1.44e-13;15!DOID:5662;1.61e-13;1 | |ontology_enrichment_celltype_v019_2=CL:0000319,5.15e-14,1;CL:0002553,7.55e-14,1;CL:0000082,9.13e-11,19;CL:0000159,1.20e-07,2;CL:1000415,1.28e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0001764;3.50e-14;1!UBERON:0001825;3.50e-14;1!UBERON:0004802;9.13e-11;19!UBERON:0000115;9.13e-11;19!UBERON:0002048;2.50e-09;22!UBERON:0004807;2.50e-09;22!UBERON:0000117;2.50e-09;22!UBERON:0000171;2.50e-09;22!UBERON:0000170;2.50e-09;22!UBERON:0005178;3.05e-08;34!UBERON:0002224;3.05e-08;34!UBERON:0000072;2.01e-07;37!UBERON:0003127;2.12e-07;2!UBERON:0005181;3.43e-07;35 | |ontology_enrichment_development_v019=UBERON:0008947;1.18e-10;29!UBERON:0001041;2.67e-10;30 | ||
|ontology_enrichment_disease=DOID:162!1.10e-18!235;DOID:305!1.55e-18!106;DOID:14566!4.17e-18!239;DOID:0050687!3.97e-12!143;DOID:0050615!8.00e-12!16;DOID:1324!2.44e-09!15;DOID:1036!1.19e-07!8;DOID:0050686!1.79e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.60e-19;16!DOID:0050619;3.50e-14;1!DOID:1357;3.50e-14;1!DOID:3030;5.15e-14;1!DOID:1324;1.44e-13;15!DOID:5662;1.61e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.60e-19,16;DOID:0050619,3.50e-14,1;DOID:1357,3.50e-14,1;DOID:3030,5.15e-14,1;DOID:1324,1.44e-13,15;DOID:5662,1.83e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.54e-12!38;UBERON:0003258!1.54e-12!38;UBERON:0002294!2.28e-09!7;UBERON:0001173!2.28e-09!7;UBERON:0004912!2.28e-09!7;UBERON:0000077!2.67e-09!130;UBERON:0003127!3.20e-09!2;UBERON:0005177!7.70e-09!107;UBERON:0001041!9.06e-09!98;UBERON:0000065!2.84e-08!53;UBERON:0000072!3.05e-08!46;UBERON:0002048!3.28e-08!22;UBERON:0000117!3.28e-08!22;UBERON:0000171!3.28e-08!22;UBERON:0000170!3.28e-08!22;UBERON:0005597!3.28e-08!22;UBERON:0000118!3.28e-08!22;UBERON:0005178!3.81e-08!34;UBERON:0002224!3.81e-08!34;UBERON:0005181!7.25e-08!35;UBERON:0005911!1.43e-07!82;UBERON:0004921!2.58e-07!129;UBERON:0004185!2.58e-07!129;UBERON:0004802!3.18e-07!19;UBERON:0000115!3.18e-07!19;UBERON:0001007!6.14e-07!155;UBERON:0001555!6.14e-07!155;UBERON:0007026!6.14e-07!155;UBERON:0000466!6.31e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.50e-14;1!UBERON:0001825;3.50e-14;1!UBERON:0004802;9.13e-11;19!UBERON:0000115;9.13e-11;19!UBERON:0002048;2.50e-09;22!UBERON:0004807;2.50e-09;22!UBERON:0000117;2.50e-09;22!UBERON:0000171;2.50e-09;22!UBERON:0000170;2.50e-09;22!UBERON:0005178;3.05e-08;34!UBERON:0002224;3.05e-08;34!UBERON:0000072;2.01e-07;37!UBERON:0003127;2.12e-07;2!UBERON:0005181;3.43e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.50e-14,1;UBERON:0001825,3.50e-14,1;UBERON:0004802,9.13e-11,19;UBERON:0000115,9.13e-11,19;UBERON:0002048,2.50e-09,22;UBERON:0000117,2.50e-09,22;UBERON:0000171,2.50e-09,22;UBERON:0000170,2.50e-09,22;UBERON:0005597,2.50e-09,22;UBERON:0000118,2.50e-09,22;UBERON:0005178,4.44e-09,34;UBERON:0002224,4.44e-09,34;UBERON:0005181,8.11e-09,35;UBERON:0008947,4.10e-08,38;UBERON:0003258,4.10e-08,38;UBERON:0003127,2.12e-07,2;UBERON:0004807,2.27e-07,28;UBERON:0005177,5.29e-07,101 | |||
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| ||
|short_description=p@chr6:23228836..23228864,+ | |short_description=p@chr6:23228836..23228864,+ | ||
}} | }} |
Latest revision as of 22:42, 30 July 2015
Short description: | p@chr6:23228836..23228864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:23228836..23228864, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.15e-14 | 1 |
lung fibroblast | 7.55e-14 | 1 |
epithelial cell of lung | 9.13e-11 | 19 |
seromucus secreting cell | 1.20e-07 | 2 |
epithelial cell of gall bladder | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.50e-14 | 1 |
paranasal sinus | 3.50e-14 | 1 |
respiratory tract epithelium | 9.13e-11 | 19 |
lung epithelium | 9.13e-11 | 19 |
lung | 2.50e-09 | 22 |
respiratory tube | 2.50e-09 | 22 |
respiration organ | 2.50e-09 | 22 |
pair of lungs | 2.50e-09 | 22 |
lung primordium | 2.50e-09 | 22 |
lung bud | 2.50e-09 | 22 |
thoracic cavity element | 4.44e-09 | 34 |
thoracic cavity | 4.44e-09 | 34 |
thoracic segment organ | 8.11e-09 | 35 |
respiratory primordium | 4.10e-08 | 38 |
endoderm of foregut | 4.10e-08 | 38 |
open tracheal system trachea | 2.12e-07 | 2 |
respiratory system epithelium | 2.27e-07 | 28 |
trunk region element | 5.29e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.60e-19 | 16 |
paranasal sinus cancer | 3.50e-14 | 1 |
maxillary sinus cancer | 3.50e-14 | 1 |
mucinous adenocarcinoma | 5.15e-14 | 1 |
lung cancer | 1.44e-13 | 15 |
pleomorphic carcinoma | 1.83e-13 | 1 |