FFCP PHASE1:Hg19::chr1:112050102..112050112,-: Difference between revisions
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|id=chr1:112050102..112050112,-
|short_description=p@chr1:112050102..112050112,-
|description=CAGE_peak_at_chr1:112050102..112050112,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:112050102..112050112,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr1:112050102..112050112,- | |||
|id=chr1:112050102..112050112,- | |||
|ontology_enrichment_celltype=CL:0000766!2.29e-52!76;CL:0000839!4.40e-47!70;CL:0000557!2.60e-46!71;CL:0002194!3.09e-43!63;CL:0000576!3.09e-43!63;CL:0000040!3.09e-43!63;CL:0000559!3.09e-43!63;CL:0000738!9.14e-42!140;CL:0002009!1.09e-41!65;CL:0002087!2.90e-36!119;CL:0002057!3.52e-36!42;CL:0002031!2.42e-34!124;CL:0000860!2.24e-33!45;CL:0000763!9.07e-33!112;CL:0000049!9.07e-33!112;CL:0000037!4.41e-32!172;CL:0000566!4.41e-32!172;CL:0000988!9.46e-30!182;CL:0002032!1.48e-28!165;CL:0000837!1.48e-28!165;CL:0002619!4.50e-12!3;CL:0000842!1.78e-11!3;CL:0002393!3.81e-10!9;CL:0002397!3.81e-10!9;CL:0000134!4.95e-10!358;CL:0002320!1.21e-09!365;CL:0000224!1.04e-08!4;CL:0000219!2.79e-08!390;CL:0002274!7.01e-07!5;CL:0000457!7.01e-07!5;CL:0002191!7.01e-07!5;CL:0000097!7.01e-07!5;CL:0000831!7.01e-07!5;CL:0002028!7.01e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.20e-24;6!CL:0002397;6.20e-24;6!CL:0000767;1.05e-21;3!CL:0002619;4.02e-21;3!CL:0000094;5.74e-18;8!CL:0000766;4.98e-15;69!CL:0000576;1.47e-14;48!CL:0000081;3.01e-13;11!CL:0000771;6.67e-09;2!CL:0002087;3.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.21e-24,72;CL:0000767,1.05e-21,3;CL:0002619,4.94e-21,3;CL:0000094,4.97e-18,8;CL:0000738,9.17e-18,136;CL:0002393,3.42e-16,9;CL:0002397,3.42e-16,9;CL:0000763,5.11e-16,108;CL:0000049,5.11e-16,108;CL:0002194,1.10e-15,59;CL:0000576,1.10e-15,59;CL:0000040,1.10e-15,59;CL:0000559,1.10e-15,59;CL:0002009,3.70e-15,61;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000839,5.55e-14,66;CL:0000557,9.10e-14,67;CL:0000988,2.02e-13,177;CL:0000081,2.71e-13,11;CL:0000860,5.77e-13,42;CL:0002057,5.77e-13,42;CL:0002087,3.26e-12,115;CL:0002031,1.14e-11,120;CL:0000473,2.57e-11,48;CL:0000234,2.57e-11,48;CL:0000771,5.49e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.53e-43!80;UBERON:0001474!2.04e-39!86;UBERON:0002390!7.22e-39!102;UBERON:0003061!7.22e-39!102;UBERON:0002193!1.32e-34!112;UBERON:0004765!2.43e-32!101;UBERON:0001434!2.43e-32!101;UBERON:0002405!2.15e-27!115;UBERON:0002204!2.76e-16!167;UBERON:0003081!1.08e-14!216;UBERON:0002384!4.09e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.38e-12,76;UBERON:0001474,3.65e-11,82;UBERON:0004765,4.01e-10,90;UBERON:0002405,8.86e-10,93;UBERON:0002390,2.99e-09,98;UBERON:0003061,2.99e-09,98;UBERON:0001434,4.71e-09,100;UBERON:0002193,2.45e-08,108 | |||
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| ||
|short_description=p@chr1:112050102..112050112,- | |||
}} | }} |
Latest revision as of 19:43, 27 July 2015
Short description: | p@chr1:112050102..112050112, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:112050102..112050112, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.21e-24 | 72 |
basophil | 1.05e-21 | 3 |
adult endothelial progenitor cell | 4.94e-21 | 3 |
granulocyte | 4.97e-18 | 8 |
leukocyte | 9.17e-18 | 136 |
intermediate monocyte | 3.42e-16 | 9 |
CD14-positive, CD16-positive monocyte | 3.42e-16 | 9 |
myeloid cell | 5.11e-16 | 108 |
common myeloid progenitor | 5.11e-16 | 108 |
monopoietic cell | 1.10e-15 | 59 |
monocyte | 1.10e-15 | 59 |
monoblast | 1.10e-15 | 59 |
promonocyte | 1.10e-15 | 59 |
macrophage dendritic cell progenitor | 3.70e-15 | 61 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
myeloid lineage restricted progenitor cell | 5.55e-14 | 66 |
granulocyte monocyte progenitor cell | 9.10e-14 | 67 |
hematopoietic cell | 2.02e-13 | 177 |
blood cell | 2.71e-13 | 11 |
classical monocyte | 5.77e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.77e-13 | 42 |
nongranular leukocyte | 3.26e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
defensive cell | 2.57e-11 | 48 |
phagocyte | 2.57e-11 | 48 |
eosinophil | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.38e-12 | 76 |
bone element | 3.65e-11 | 82 |
skeletal element | 4.01e-10 | 90 |
immune system | 8.86e-10 | 93 |
hematopoietic system | 2.99e-09 | 98 |
blood island | 2.99e-09 | 98 |
skeletal system | 4.71e-09 | 100 |
hemolymphoid system | 2.45e-08 | 108 |